Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 4
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
26371478
|
msms PMID:
26371478
doi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400025322 | Potato | cytosol | 29.49 | 96.01 |
| GSMUA_Achr10P... | Banana | mitochondrion | 69.9 | 68.98 |
| AT3G42850.2 | Thale cress | plastid | 68.47 | 68.96 |
| Zm00001d052587_P001 | Maize | cytosol | 6.22 | 68.54 |
| Bra002849.1-P | Field mustard | plastid | 67.96 | 68.52 |
| CDY17385 | Canola | cytosol, plastid | 67.96 | 68.52 |
| GSMUA_Achr3P05470_001 | Banana | cytosol | 58.78 | 68.25 |
| Os02t0141300-01 | Rice | cytosol, plasma membrane | 68.98 | 67.87 |
| KRH04897 | Soybean | cytosol | 69.69 | 67.62 |
| CDY57963 | Canola | cytosol | 66.94 | 67.56 |
| TraesCS6A01G112800.1 | Wheat | golgi, unclear | 67.86 | 67.38 |
| KRH16180 | Soybean | cytosol | 69.29 | 67.16 |
| TraesCS6D01G102400.1 | Wheat | cytosol | 67.76 | 67.14 |
| TraesCS6B01G141400.1 | Wheat | cytosol | 67.65 | 67.04 |
| EES06260 | Sorghum | cytosol | 68.16 | 66.6 |
| Zm00001d053886_P001 | Maize | cytosol | 67.55 | 66.53 |
| OQU77002 | Sorghum | cytosol, plasma membrane, plastid | 57.35 | 66.2 |
| HORVU7Hr1G096680.5 | Barley | cytosol | 66.02 | 65.82 |
| HORVU6Hr1G020380.1 | Barley | mitochondrion | 67.76 | 65.68 |
| TraesCS7A01G417000.1 | Wheat | cytosol | 65.92 | 65.52 |
| TraesCS7D01G410100.1 | Wheat | cytosol | 66.12 | 65.19 |
| Zm00001d014689_P006 | Maize | plastid | 65.1 | 65.04 |
| TraesCS7B01G317000.1 | Wheat | cytosol | 65.71 | 64.98 |
| Os06t0702500-01 | Rice | plastid | 64.49 | 63.58 |
| VIT_11s0065g00290.t01 | Wine grape | cytosol | 36.43 | 59.8 |
| Zm00001d044084_P001 | Maize | plastid | 7.65 | 33.48 |
Protein Annotations
| KEGG:00052+2.7.1.6 | KEGG:00520+2.7.1.46 | KEGG:00520+2.7.1.6 | MapMan:3.13.7.2.1 | Gene3D:3.30.230.10 | Gene3D:3.30.70.890 |
| Gene3D:3.40.50.2000 | InterPro:GHMP_kinase_C_sf | InterPro:GHMP_kinase_N_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005534 | GO:GO:0030246 | InterPro:GalKase_gal-bd | InterPro:Galk_glycosyltransferase | InterPro:IPR014721 |
| InterPro:IPR036554 | UniProt:K4CCD4 | PFAM:PF00288 | PFAM:PF10509 | PIRSF:PIRSF036399 | PRINTS:PR00959 |
| PANTHER:PTHR10457 | PANTHER:PTHR10457:SF19 | InterPro:Ribosomal_S5_D2-typ_fold | InterPro:Ribosomal_S5_D2-typ_fold_subgr | SUPFAM:SSF53756 | SUPFAM:SSF54211 |
| SUPFAM:SSF55060 | EnsemblPlantsGene:Solyc07g016170.2 | EnsemblPlants:Solyc07g016170.2.1 | UniParc:UPI000276BDE7 | SEG:seg | : |
Description
No Description!
Coordinates
chr7:+:6369032..6386695
Molecular Weight (calculated)
107905.0 Da
IEP (calculated)
6.742
GRAVY (calculated)
-0.167
Length
980 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLFLHILHA SQLSASGEIL KCKVVRNLIQ AGHEVHVVTG APDYVYTIET QSPRLFIRKV LLDCGAVQAD ALTVDPLASL EKYNQTAVLP RDSILATEVE
101: WLKSVKADLV ISDVVPVACR AAADAGIRAV CCTNFSWDFI YADYVMSAGY HNRSIIWQIA EDYSHCEFVI RLPGYCPMPA FRDVIDVPLV VRRLHKTREK
201: VREELGILDS QKVLIYNFGG QPAGWKLKKE YLPEGWICLV CGASEDQEIP SNFIKLPKDF YTPDAIAASD VLLGKIGYGT TSEALAYKVP LIFVRRDYFN
301: EEPFLRNMIE HYQAGVEMIR RDLLNGCWAP YIERAITLKP CYDGGVNGGE VASRILQDTA TGKHHSSHGL SGARRLRDAI VLGYQLQRIT GKDIAIPEWY
401: SLAQNELRSR TQLANKEVLD IGSLTRQSDY FTILHGDHQG LPDTLGFLKS LAEMESSGRP QNNNKLQTRD HLAASAMFNW EEEIFVSRAP GRLDVMGGIA
501: DYSGSLVLQM PTRESCHVAI QRNHPSKHKL WKHAQARQPK EGPTAVLQIV SLGSELGNRG PTFDMDLSDF VEDGRPITYE KAYNYFARDP AQKWAAYVAG
601: TILVLMTELG IRFEDSISIL VSSGVPEGKG VSSSAAIEVA SMTAVAAAHG LNIDPRHLAL LCQKVENHIV GAPCGVMDQM ASACGEANKL LAMVCQPAEV
701: LGLVDIPPTI RFWGIDSGIR HSVGGSDYKS VRVGAFMGKK IIKSSASVEL CSSLSNISTQ QINKSNPDDA DEDGKNLLET EASLDYLCNL SAHRYEASYA
801: TRLPESLSGQ EFVEKYLDHD DSVTTIDKER NYAVRAPTRH PIYENFRVKA FKVLLSATPS NYQLSALGEL MYQCHLSYSA CGLASNGTDR LVNLVQEMQH
901: SKSSESEGGT LFGAKITGGG SGGTVCVIGR NCLRSNQQLV EIQQRYKTAT GFSPYVFEGS SPGAAKFGHL QIRLLKSRQT
101: WLKSVKADLV ISDVVPVACR AAADAGIRAV CCTNFSWDFI YADYVMSAGY HNRSIIWQIA EDYSHCEFVI RLPGYCPMPA FRDVIDVPLV VRRLHKTREK
201: VREELGILDS QKVLIYNFGG QPAGWKLKKE YLPEGWICLV CGASEDQEIP SNFIKLPKDF YTPDAIAASD VLLGKIGYGT TSEALAYKVP LIFVRRDYFN
301: EEPFLRNMIE HYQAGVEMIR RDLLNGCWAP YIERAITLKP CYDGGVNGGE VASRILQDTA TGKHHSSHGL SGARRLRDAI VLGYQLQRIT GKDIAIPEWY
401: SLAQNELRSR TQLANKEVLD IGSLTRQSDY FTILHGDHQG LPDTLGFLKS LAEMESSGRP QNNNKLQTRD HLAASAMFNW EEEIFVSRAP GRLDVMGGIA
501: DYSGSLVLQM PTRESCHVAI QRNHPSKHKL WKHAQARQPK EGPTAVLQIV SLGSELGNRG PTFDMDLSDF VEDGRPITYE KAYNYFARDP AQKWAAYVAG
601: TILVLMTELG IRFEDSISIL VSSGVPEGKG VSSSAAIEVA SMTAVAAAHG LNIDPRHLAL LCQKVENHIV GAPCGVMDQM ASACGEANKL LAMVCQPAEV
701: LGLVDIPPTI RFWGIDSGIR HSVGGSDYKS VRVGAFMGKK IIKSSASVEL CSSLSNISTQ QINKSNPDDA DEDGKNLLET EASLDYLCNL SAHRYEASYA
801: TRLPESLSGQ EFVEKYLDHD DSVTTIDKER NYAVRAPTRH PIYENFRVKA FKVLLSATPS NYQLSALGEL MYQCHLSYSA CGLASNGTDR LVNLVQEMQH
901: SKSSESEGGT LFGAKITGGG SGGTVCVIGR NCLRSNQQLV EIQQRYKTAT GFSPYVFEGS SPGAAKFGHL QIRLLKSRQT
0001: MSERAKLQKK KKVTEDLLDS LLLLPPWRNF AISQSHQSII ESSSQRLPEK MRIDENEGVS ASSKHLVFAY YVTGHGFGHA TRVVEVVRHL IAAGHDVHVV
0101: TGAPDFVFTS EIQSPRLKIR KVLLDCGAVQ ADALTVDRLA SLEKYVETAV VPRAEILETE VEWLHSIKAD FVVSDVVPVA CRAAADAGIR SVCVTNFSWD
0201: FIYAEYVMAA GYHHRSIVWQ IAEDYSHCEF LIRLPGYCPM PAFRDVIDVP LVVRRLHKSR KEVRKELGIA EDVNVVILNF GGQPSGWNLK ETSLPTGWLC
0301: LVCGASETLE LPPNFIKLAK DAYTPDIIAA SDCMLGKIGY GTVSEALSYK VPFVFVRRDY FNEEPFLRNM LEFYQCGVEM IRRDLLMGQW TPYLERAVSL
0401: KPCYEGGING GEIAAHILQE TAIGRHCASD KLSGARRLRD AIILGYQLQR VPGRDIAIPE WYSRAENELG QSAGSSPTVQ ANENNSLVES CIDDFDILQG
0501: DVQGLSDTCT FLKSLAMLDA IHDSEKSTEK KTVRERKAAG GLFNWEEEIF VARAPGRLDV MGGIADYSGS LVLQMPIREA CHVAVQRNLP GKHRLWKHAQ
0601: ARQQAKGQVP TPVLQIVSYG SEISNRAPTF DMDLSDFMDG DEPISYEKAR KFFAQDPAQK WAAYVAGTIL VLMIELGVRF EDSISLLVSS AVPEGKGVSS
0701: SAAVEVASMS AIAAAHGLSI DPRDLAILCQ KVENHIVGAP CGVMDQMTSS CGEANKLLAM ICQPAEVVGL VEIPNHVRFW GIDSGIRHSV GGADYRSVRV
0801: GAYMGRKMIK SMASSILSPS ASSANGGNPE ELEDEGIDLL EAEASLDYLC NLSPHRYEAR YADKLPDIML GQTFIEEYAD HDDPVTVIDQ KRSYSVKAPA
0901: RHPIYENFRV KTFKALLTSA TSDEQLTALG GLLYQCHYSY SACGLGSDGT NRLVQLVQGM QHNKSNSEDG TLYGAKITGG GSGGTVCVVG RNSLRSSQQI
1001: LEIQQRYKAA TGYLPLIFEG SSPGAGKFGY LRIRRRISL
0101: TGAPDFVFTS EIQSPRLKIR KVLLDCGAVQ ADALTVDRLA SLEKYVETAV VPRAEILETE VEWLHSIKAD FVVSDVVPVA CRAAADAGIR SVCVTNFSWD
0201: FIYAEYVMAA GYHHRSIVWQ IAEDYSHCEF LIRLPGYCPM PAFRDVIDVP LVVRRLHKSR KEVRKELGIA EDVNVVILNF GGQPSGWNLK ETSLPTGWLC
0301: LVCGASETLE LPPNFIKLAK DAYTPDIIAA SDCMLGKIGY GTVSEALSYK VPFVFVRRDY FNEEPFLRNM LEFYQCGVEM IRRDLLMGQW TPYLERAVSL
0401: KPCYEGGING GEIAAHILQE TAIGRHCASD KLSGARRLRD AIILGYQLQR VPGRDIAIPE WYSRAENELG QSAGSSPTVQ ANENNSLVES CIDDFDILQG
0501: DVQGLSDTCT FLKSLAMLDA IHDSEKSTEK KTVRERKAAG GLFNWEEEIF VARAPGRLDV MGGIADYSGS LVLQMPIREA CHVAVQRNLP GKHRLWKHAQ
0601: ARQQAKGQVP TPVLQIVSYG SEISNRAPTF DMDLSDFMDG DEPISYEKAR KFFAQDPAQK WAAYVAGTIL VLMIELGVRF EDSISLLVSS AVPEGKGVSS
0701: SAAVEVASMS AIAAAHGLSI DPRDLAILCQ KVENHIVGAP CGVMDQMTSS CGEANKLLAM ICQPAEVVGL VEIPNHVRFW GIDSGIRHSV GGADYRSVRV
0801: GAYMGRKMIK SMASSILSPS ASSANGGNPE ELEDEGIDLL EAEASLDYLC NLSPHRYEAR YADKLPDIML GQTFIEEYAD HDDPVTVIDQ KRSYSVKAPA
0901: RHPIYENFRV KTFKALLTSA TSDEQLTALG GLLYQCHYSY SACGLGSDGT NRLVQLVQGM QHNKSNSEDG TLYGAKITGG GSGGTVCVVG RNSLRSSQQI
1001: LEIQQRYKAA TGYLPLIFEG SSPGAGKFGY LRIRRRISL
Arabidopsis Description
ARA1L-arabinokinase [Source:UniProtKB/Swiss-Prot;Acc:O23461]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.