CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, nucleus, plasma membrane, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014689_P006	Maize	plastid	92.82	80.33
GSMUA_Achr3P05470_001	Banana	cytosol	72.08	72.51
HORVU7Hr1G096680.5	Barley	cytosol	83.75	72.33
TraesCS7A01G417000.1	Wheat	cytosol	83.63	72.01
TraesCS7D01G410100.1	Wheat	cytosol	83.75	71.53
TraesCS7B01G317000.1	Wheat	cytosol	83.04	71.14
Os06t0702500-01	Rice	plastid	82.1	70.12
EES06260	Sorghum	cytosol	78.8	66.7
PGSC0003DMT400025322	Potato	cytosol	23.32	65.78
GSMUA_Achr10P...	Banana	mitochondrion	74.56	63.75
CDY17385	Canola	cytosol, plastid	65.96	57.61
Bra002849.1-P	Field mustard	plastid	65.84	57.51
Solyc07g016170.2.1	Tomato	plastid	66.2	57.35
CDY57963	Canola	cytosol	65.49	57.26
AT3G42850.2	Thale cress	plastid	65.25	56.94
KRH04897	Soybean	cytosol	67.73	56.93
KRH16180	Soybean	cytosol	67.37	56.58
VIT_11s0065g00290.t01	Wine grape	cytosol	39.46	56.11

Protein Annotations

KEGG:00052+2.7.1.6	KEGG:00520+2.7.1.6	MapMan:3.13.7.2.1	Gene3D:3.30.230.10	Gene3D:3.30.70.890	Gene3D:3.40.50.2000
UniProt:A0A1W0VUQ1	InterPro:GHMP_kinase_C_dom	InterPro:GHMP_kinase_C_sf	InterPro:GHMP_kinase_N_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005534	GO:GO:0030246	InterPro:GalKase_gal-bd	InterPro:IPR014721
InterPro:IPR036554	EnsemblPlants:OQU77002	ProteinID:OQU77002	ProteinID:OQU77002.1	PFAM:PF00288	PFAM:PF08544
PFAM:PF10509	PRINTS:PR00959	PANTHER:PTHR10457	PANTHER:PTHR10457:SF12	MetaCyc:PWY-3821	MetaCyc:PWY-6317
MetaCyc:PWY-6527	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	EnsemblPlantsGene:SORBI_3010G253200	SUPFAM:SSF53756	SUPFAM:SSF54211
SUPFAM:SSF55060	UniParc:UPI0009DC8BB7	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:59191922..59200323

Molecular Weight (calculated)

92690.9 Da

IEP (calculated)

6.219

GRAVY (calculated)

-0.157

Length

849 amino acids

Sequence
(BLAST)

001: MGVPSVCIGN FSWDFIYAEY IMEAGYHHRS IVWQIAEDYS HCDILLRLPG YGPMPAFRNV IDVPLVVRGF RKSRSEVRKE LGIEENAKVL IFNFGGQPAG
101: WKLKQEWLPD GWICLVCGAS DSQDVPPNFI KLAKDAYTPD VMAASDCMLG KIGYGTASEV LACKLPLVFV RRDYFNEEPF LRNLLEYYQN SIEMIRSDFL
201: AGHWKPYLLR ALTLQPCYNG PIIGGEVVAQ ILQDTAVGKK CVSDKSSGAR RLQDAMVSGY VLQRAPGRDA GIPDWYSLSK TETETGAGPT SKNVATKESA
301: ASSRCIEDFE ILHGDLQGLT DTIEFLKSLS ELSGNDLKSS KKQRLERTAA SVLFDWETEI YVARAPGRLD VMGGIADYSG SLVLQMPLRE ACHVAVQRSH
401: PSKQKLWEHT KARQLENAGL VPVVQIVSFG SDLSNRAPTF NMDLTDFMDG GKPISYEKAR ELFCQDPSQK WAAYVAGTIL VLMTELGAQF TDSISILVSS
501: AVPEGKGVSS SASVEVSTMS AIAAAYGLNI IPRDLALLCQ KVENHVVGAP CGVMDQMASA CGEANKLLAM VCQPAEVKEL VGIPTHIRFW GLDSGIRHSV
601: GGGDYGSVRV GTYMGRKMIK CAASDLVSES LTSGPPVQSD CYKENGMGVL KSEAALEYLC NLPPHRYEAV YAKDIPEVIS GEAFSEKYGD HDDTVTVIDP
701: KRSYSVKAPT RHPIYENFRV EAFKTLLAAG NTDEQLSALG ELMYQCHNSY SACGLGSDGT DRLVNLVREM QHMKTSEGGS PSLFGAKITG GGSGGTVCVI
801: GKNCARSSEE IAEIQRRYKA ETGYLPILFD GSSPGAGKFG YLKIRRRCP

Best Arabidopsis Sequence Match ( AT4G16130.1 )
(BLAST)

0001: MSERAKLQKK KKVTEDLLDS LLLLPPWRNF AISQSHQSII ESSSQRLPEK MRIDENEGVS ASSKHLVFAY YVTGHGFGHA TRVVEVVRHL IAAGHDVHVV
0101: TGAPDFVFTS EIQSPRLKIR KVLLDCGAVQ ADALTVDRLA SLEKYVETAV VPRAEILETE VEWLHSIKAD FVVSDVVPVA CRAAADAGIR SVCVTNFSWD
0201: FIYAEYVMAA GYHHRSIVWQ IAEDYSHCEF LIRLPGYCPM PAFRDVIDVP LVVRRLHKSR KEVRKELGIA EDVNVVILNF GGQPSGWNLK ETSLPTGWLC
0301: LVCGASETLE LPPNFIKLAK DAYTPDIIAA SDCMLGKIGY GTVSEALSYK VPFVFVRRDY FNEEPFLRNM LEFYQCGVEM IRRDLLMGQW TPYLERAVSL
0401: KPCYEGGING GEIAAHILQE TAIGRHCASD KLSGARRLRD AIILGYQLQR VPGRDIAIPE WYSRAENELG QSAGSSPTVQ ANENNSLVES CIDDFDILQG
0501: DVQGLSDTCT FLKSLAMLDA IHDSEKSTEK KTVRERKAAG GLFNWEEEIF VARAPGRLDV MGGIADYSGS LVLQMPIREA CHVAVQRNLP GKHRLWKHAQ
0601: ARQQAKGQVP TPVLQIVSYG SEISNRAPTF DMDLSDFMDG DEPISYEKAR KFFAQDPAQK WAAYVAGTIL VLMIELGVRF EDSISLLVSS AVPEGKGVSS
0701: SAAVEVASMS AIAAAHGLSI DPRDLAILCQ KVENHIVGAP CGVMDQMTSS CGEANKLLAM ICQPAEVVGL VEIPNHVRFW GIDSGIRHSV GGADYRSVRV
0801: GAYMGRKMIK SMASSILSPS ASSANGGNPE ELEDEGIDLL EAEASLDYLC NLSPHRYEAR YADKLPDIML GQTFIEEYAD HDDPVTVIDQ KRSYSVKAPA
0901: RHPIYENFRV KTFKALLTSA TSDEQLTALG GLLYQCHYSY SACGLGSDGT NRLVQLVQGM QHNKSNSEDG TLYGAKITGG GSGGTVCVVG RNSLRSSQQI
1001: LEIQQRYKAA TGYLPLIFEG SSPGAGKFGY LRIRRRISL

Arabidopsis Description

ARA1L-arabinokinase [Source:UniProtKB/Swiss-Prot;Acc:O23461]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.