Factsheet for Os10t0542400-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 19038476

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029783_P003	Maize	extracellular	77.82	77.82
KXG38992	Sorghum	extracellular	78.91	76.95
TraesCS1B01G217200.1	Wheat	extracellular	72.73	72.73
HORVU1Hr1G052290.4	Barley	extracellular	71.27	70.76
TraesCS1D01G206700.1	Wheat	extracellular	72.36	70.32
TraesCS1A01G203200.1	Wheat	extracellular	72.0	70.21
Os03t0132200-01	Rice	extracellular, plastid	70.91	69.89
GSMUA_Achr11P...	Banana	extracellular	60.73	62.78
GSMUA_Achr5P19030_001	Banana	extracellular	59.27	61.74
GSMUA_Achr5P11590_001	Banana	extracellular	57.09	60.15
VIT_03s0038g03430.t01	Wine grape	extracellular	54.18	57.53
PGSC0003DMT400047948	Potato	extracellular	53.09	56.15
Solyc01g112000.2.1	Tomato	extracellular	53.09	55.94
KRH24119	Soybean	extracellular	53.09	55.94
GSMUA_Achr11P...	Banana	extracellular	53.82	55.85
KRH29091	Soybean	extracellular	52.36	55.6
GSMUA_AchrUn_...	Banana	extracellular	37.45	54.79
Os07t0475400-01	Rice	extracellular	54.55	54.35
AT3G45970.1	Thale cress	extracellular	51.27	53.21
Bra011899.1-P	Field mustard	extracellular	51.64	52.79
CDY61895	Canola	extracellular	51.64	52.79
Bra033563.1-P	Field mustard	extracellular	50.55	52.65
CDY69288	Canola	extracellular	50.55	52.65
AT3G45960.2	Thale cress	extracellular	50.18	52.47
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	58.55	52.44
CDY52801	Canola	extracellular	51.27	52.42
CDY64278	Canola	extracellular	49.45	51.32
CDY72634	Canola	extracellular	49.45	51.32
AT4G38400.1	Thale cress	extracellular	49.09	50.94
Os06t0725300-01	Rice	endoplasmic reticulum	44.0	38.66
Os07t0496250-01	Rice	extracellular	29.82	32.03
Os05t0246300-01	Rice	extracellular	27.27	28.41
Os02t0639500-01	Rice	extracellular	26.55	27.97
Os04t0552000-00	Rice	extracellular	26.55	27.65
Os02t0658600-00	Rice	plastid	26.55	26.74
Os10t0555700-02	Rice	extracellular	24.73	26.05
Os02t0658800-01	Rice	extracellular	27.27	25.68
Os03t0106900-00	Rice	extracellular	24.73	25.47
Os03t0106500-01	Rice	plasma membrane	24.73	25.47
Os10t0555900-02	Rice	extracellular	24.73	25.37
Os03t0102500-01	Rice	extracellular	25.45	25.36
Os04t0552200-00	Rice	plasma membrane	25.09	25.09
Os10t0555600-01	Rice	extracellular	24.73	24.73
Os03t0106700-00	Rice	extracellular	20.36	24.56
Os03t0106800-01	Rice	plasma membrane	23.64	24.34
Os10t0556100-01	Rice	extracellular	23.64	22.73
Os03t0102700-01	Rice	plastid	22.91	22.58
Os03t0645000-00	Rice	mitochondrion	25.45	22.36
Os10t0548600-01	Rice	plasma membrane	21.82	22.3
Os04t0530100-01	Rice	extracellular, mitochondrion, vacuole	19.27	16.41

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.2	EntrezGene:4349265	ProteinID:AAG13596.1	ProteinID:AAP54861.1
EMBL:AK066611	EMBL:AK068088	ProteinID:BAF27108.1	ProteinID:BAT11876.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	InterPro:IPR007112	InterPro:IPR007117
InterPro:IPR036749	InterPro:IPR036908	EnsemblPlantsGene:Os10g0542400	EnsemblPlants:Os10t0542400-01	PFAM:PF01357	PFAM:PF03330
PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PFscan:PS51257	PANTHER:PTHR31692	PANTHER:PTHR31692:SF53
UniProt:Q7XCL0	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00000A3F8E	RefSeq:XP_015614226.1	SEG:seg	:

Description

EXLA2Expansin/Lol pI family protein. (Os10t0542400-01);Expansin/Lol pI family protein. (Os10t0542400-02)

Coordinates

chr10:+:21179551..21181282

Molecular Weight (calculated)

29303.0 Da

IEP (calculated)

8.914

GRAVY (calculated)

-0.024

Length

275 amino acids

Sequence
(BLAST)

001: MAVRCCSSMA SASVVLFFVV VGMSASMVSG CDRCVRRSKA GFRDSSIALN AGSCGYGSLA ASFNGGHLAA ASPALFRGGV GCGACFQVRC KDGKLCSTAG
101: AKVVVTDEAR STNRTDLVLS AAAYAAMARP GMAAQLRTRR AVDVEYKRVP CEYAAGRNLS IRVEEKSRPP RELSIRFLYQ GGQTDIVAVD VATVGSSNWK
201: FMTRDYGPAW STAQAPAGPL QFRVVVTGGY DGKWVWADGE VLPRRWTAGR VYDAGVQIAD VAQEGCYPCD TQEWK

Best Arabidopsis Sequence Match ( AT3G45970.1 )
(BLAST)

001: MGSFLFLIVV IFLFSSSVNA CDRCLHRSKA AYFSSASALS SGACAYGSMA TSFFAGHIAA AIPSIYKDGA GCGACFQVRC KNPKLCSTKG TIVMITDLNK
101: SNQTDLVLSS RAFRAMAKPI VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID IAQVGSSPNW GYMTRSHGAV
201: WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK IYDAGVQITD IAQEGCDPCD AHIWN

Arabidopsis Description

EXLA1Expansin-like A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.