Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 10
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0106900-00 | Rice | extracellular | 100.0 | 100.0 |
| Os03t0106700-00 | Rice | extracellular | 81.65 | 95.61 |
| Os03t0106800-01 | Rice | plasma membrane | 82.02 | 82.02 |
| Zm00001d017736_P001 | Maize | cytosol | 50.56 | 69.95 |
| Zm00001d017735_P001 | Maize | extracellular | 64.79 | 68.38 |
| OQU93456 | Sorghum | cytosol, extracellular | 53.93 | 67.92 |
| Zm00001d017740_P001 | Maize | extracellular | 63.67 | 67.19 |
| TraesCS4B01G362500.1 | Wheat | extracellular | 66.29 | 65.56 |
| TraesCS4B01G362600.1 | Wheat | extracellular, unclear | 66.29 | 65.56 |
| OQU93455 | Sorghum | extracellular | 62.55 | 65.23 |
| TraesCS4B01G362100.1 | Wheat | extracellular | 65.92 | 65.19 |
| TraesCS4D01G355100.1 | Wheat | extracellular | 65.92 | 65.19 |
| TraesCS4D01G355800.1 | Wheat | extracellular | 65.92 | 65.19 |
| OQU93459 | Sorghum | extracellular | 64.79 | 65.04 |
| OQU93458 | Sorghum | extracellular | 64.79 | 65.04 |
| OQU93457 | Sorghum | extracellular | 64.79 | 65.04 |
| EER95683 | Sorghum | extracellular | 64.79 | 65.04 |
| EER95684 | Sorghum | extracellular | 64.79 | 65.04 |
| Zm00001d040608_P001 | Maize | extracellular | 65.17 | 64.93 |
| TraesCS5A01G530700.1 | Wheat | extracellular | 65.54 | 64.81 |
| Zm00001d017732_P001 | Maize | extracellular | 65.54 | 64.81 |
| Zm00001d048384_P001 | Maize | extracellular | 65.17 | 64.68 |
| HORVU4Hr1G086830.1 | Barley | extracellular | 64.42 | 64.66 |
| TraesCS4D01G355700.1 | Wheat | extracellular | 64.79 | 64.55 |
| Zm00001d017737_P001 | Maize | extracellular | 65.17 | 64.44 |
| Zm00001d017733_P001 | Maize | extracellular | 65.17 | 64.44 |
| TraesCS5A01G530100.1 | Wheat | extracellular | 65.17 | 64.44 |
| Zm00001d040609_P001 | Maize | extracellular | 64.79 | 64.31 |
| Os10t0548600-01 | Rice | plasma membrane | 63.67 | 63.2 |
| Zm00001d017731_P001 | Maize | extracellular | 55.06 | 63.09 |
| HORVU4Hr1G086930.1 | Barley | extracellular | 62.92 | 61.31 |
| HORVU4Hr1G087070.2 | Barley | extracellular, mitochondrion, peroxisome | 62.92 | 59.79 |
| Os10t0555900-02 | Rice | extracellular | 50.19 | 50.0 |
| Os03t0102700-01 | Rice | plastid | 51.31 | 49.1 |
| Os10t0555600-01 | Rice | extracellular | 50.19 | 48.73 |
| Os10t0555700-02 | Rice | extracellular | 45.69 | 46.74 |
| Os03t0102500-01 | Rice | extracellular | 46.44 | 44.93 |
| Os10t0556100-01 | Rice | extracellular | 46.82 | 43.71 |
| Os04t0552000-00 | Rice | extracellular | 40.45 | 40.91 |
| GSMUA_AchrUn_... | Banana | extracellular | 13.86 | 40.22 |
| Os04t0552200-00 | Rice | plasma membrane | 40.45 | 39.27 |
| Os02t0658800-01 | Rice | extracellular | 41.95 | 38.36 |
| Os05t0246300-01 | Rice | extracellular | 37.83 | 38.26 |
| Zm00001d017734_P001 | Maize | cytosol | 65.54 | 38.21 |
| Os02t0658600-00 | Rice | plastid | 38.58 | 37.73 |
| Os02t0639500-01 | Rice | extracellular | 33.33 | 34.1 |
| Os03t0645000-00 | Rice | mitochondrion | 38.58 | 32.91 |
| Os07t0496250-01 | Rice | extracellular | 26.59 | 27.73 |
| Os10t0542400-01 | Rice | extracellular | 25.47 | 24.73 |
| Os03t0132200-01 | Rice | extracellular, plastid | 24.72 | 23.66 |
| Os07t0475400-01 | Rice | extracellular | 22.85 | 22.1 |
| Os04t0530100-01 | Rice | extracellular, mitochondrion, vacuole | 23.22 | 19.2 |
| Os06t0725300-01 | Rice | endoplasmic reticulum | 21.72 | 18.53 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | EntrezGene:4331323 | EntrezGene:4331326 | ProteinID:AAK84682.1 |
| ProteinID:AAN60487.1 | ProteinID:AAN60491.1 | ProteinID:ABF93536.1 | ProteinID:ABF93540.1 | EMBL:AF261270 | EMBL:AK072792 |
| ProteinID:BAF10600.2 | ProteinID:BAF10603.1 | ProteinID:BAS81873.1 | ProteinID:BAS81878.1 | ProteinID:EAZ25286.1 | InterPro:Expan_Lol_pI |
| InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005618 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 |
| GO:GO:0019953 | GO:GO:0030312 | GO:GO:0071555 | UniProt:I3QD42 | InterPro:IPR007112 | InterPro:IPR007117 |
| InterPro:IPR036749 | InterPro:IPR036908 | EMBL:JF969197 | InterPro:LolPI | EnsemblPlantsGene:Os03g0106500 | EnsemblPlants:Os03t0106500-01 |
| PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 |
| PANTHER:PTHR31692 | PANTHER:PTHR31692:SF21 | UniProt:Q40638 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 |
| SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM | EMBL:U31771 | UniParc:UPI000009F0C0 | RefSeq:XP_015629185.1 |
| RefSeq:XP_015629913.1 | SEG:seg | : | : | : | : |
Description
BETA-EXPANSIN 1ABeta-expansin precursor (Beta-expansin 1). (Os03t0106500-01)
Coordinates
chr3:+:386875..388037
Molecular Weight (calculated)
28628.1 Da
IEP (calculated)
6.735
GRAVY (calculated)
-0.310
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSLLLAC VVVAAMVSAV SCGPPKVPPG PNITTSYGDK WLEAKATWYG APKGAGPKDN GGACGYKDVD KAPFLGMNSC GNDPIFKDGK GCGSCFEIKC
101: SKPEACSDKP ALIHVTDMND EPIAAYHFDL SGLAFGAMAK DGKDEELRKA GIIDTQFRRV KCKYPADTKI TFHIEKASNP NYLALLVKYV AGDGDVVEVE
201: IKEKGSEEWK ALKESWGAIW RIDTPKPLKG PFSVRVTTEG GEKIIAEDAI PDGWKADSVY KSNVQAK
101: SKPEACSDKP ALIHVTDMND EPIAAYHFDL SGLAFGAMAK DGKDEELRKA GIIDTQFRRV KCKYPADTKI TFHIEKASNP NYLALLVKYV AGDGDVVEVE
201: IKEKGSEEWK ALKESWGAIW RIDTPKPLKG PFSVRVTTEG GEKIIAEDAI PDGWKADSVY KSNVQAK
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.