Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G086930.1 | Barley | extracellular | 96.8 | 99.27 |
| HORVU4Hr1G086830.1 | Barley | extracellular | 92.17 | 97.37 |
| TraesCS5A01G530100.1 | Wheat | extracellular | 82.21 | 85.56 |
| TraesCS4B01G362100.1 | Wheat | extracellular | 81.85 | 85.19 |
| TraesCS5A01G530700.1 | Wheat | extracellular | 81.85 | 85.19 |
| TraesCS4B01G362500.1 | Wheat | extracellular | 81.49 | 84.81 |
| TraesCS4B01G362600.1 | Wheat | extracellular, unclear | 81.49 | 84.81 |
| TraesCS4D01G355700.1 | Wheat | extracellular | 80.43 | 84.33 |
| TraesCS4D01G355800.1 | Wheat | extracellular | 80.78 | 84.07 |
| TraesCS4D01G355100.1 | Wheat | extracellular | 80.78 | 84.07 |
| OQU93456 | Sorghum | cytosol, extracellular | 50.89 | 67.45 |
| Zm00001d017736_P001 | Maize | cytosol | 45.91 | 66.84 |
| Zm00001d017735_P001 | Maize | extracellular | 58.36 | 64.82 |
| Zm00001d017740_P001 | Maize | extracellular | 58.36 | 64.82 |
| EER95684 | Sorghum | extracellular | 60.5 | 63.91 |
| Zm00001d048384_P001 | Maize | extracellular | 60.85 | 63.57 |
| Zm00001d040609_P001 | Maize | extracellular | 60.85 | 63.57 |
| OQU93457 | Sorghum | extracellular | 60.14 | 63.53 |
| EER95683 | Sorghum | extracellular | 60.14 | 63.53 |
| OQU93459 | Sorghum | extracellular | 60.14 | 63.53 |
| OQU93458 | Sorghum | extracellular | 60.14 | 63.53 |
| Zm00001d040608_P001 | Maize | extracellular | 60.5 | 63.43 |
| Os03t0106500-01 | Rice | plasma membrane | 59.79 | 62.92 |
| Os03t0106900-00 | Rice | extracellular | 59.79 | 62.92 |
| OQU93455 | Sorghum | extracellular | 57.3 | 62.89 |
| Zm00001d017737_P001 | Maize | extracellular | 59.07 | 61.48 |
| Os03t0106800-01 | Rice | plasma membrane | 58.01 | 61.05 |
| Zm00001d017733_P001 | Maize | extracellular | 58.01 | 60.37 |
| Zm00001d017732_P001 | Maize | extracellular | 58.01 | 60.37 |
| Os03t0106700-00 | Rice | extracellular | 48.75 | 60.09 |
| Zm00001d017731_P001 | Maize | extracellular | 48.4 | 58.37 |
| HORVU1Hr1G053300.1 | Barley | extracellular | 55.16 | 55.96 |
| HORVU3Hr1G076110.1 | Barley | cytosol, extracellular | 23.84 | 48.55 |
| HORVU3Hr1G073140.1 | Barley | plastid | 44.84 | 47.91 |
| HORVU3Hr1G105170.1 | Barley | plastid | 44.84 | 47.91 |
| HORVU0Hr1G005490.1 | Barley | extracellular | 48.04 | 47.2 |
| HORVU6Hr1G055090.1 | Barley | extracellular | 44.84 | 47.01 |
| HORVU3Hr1G001920.2 | Barley | extracellular | 45.91 | 45.91 |
| HORVU2Hr1G013380.1 | Barley | cytosol, extracellular, mitochondrion | 36.65 | 43.46 |
| HORVU1Hr1G054210.1 | Barley | extracellular | 41.64 | 43.17 |
| HORVU6Hr1G005760.1 | Barley | extracellular | 43.77 | 43.16 |
| HORVU3Hr1G073120.1 | Barley | extracellular | 46.62 | 42.81 |
| HORVU3Hr1G105180.1 | Barley | extracellular | 46.62 | 42.81 |
| HORVU6Hr1G005810.3 | Barley | extracellular | 45.91 | 42.57 |
| HORVU2Hr1G013360.1 | Barley | extracellular | 37.01 | 41.43 |
| HORVU0Hr1G016380.2 | Barley | extracellular | 38.08 | 40.38 |
| HORVU1Hr1G054240.2 | Barley | plastid | 44.13 | 39.12 |
| HORVU2Hr1G097480.1 | Barley | extracellular | 39.15 | 38.87 |
| HORVU3Hr1G105520.1 | Barley | extracellular | 46.98 | 38.26 |
| GSMUA_AchrUn_... | Banana | extracellular | 12.46 | 38.04 |
| HORVU6Hr1G063180.1 | Barley | extracellular | 36.65 | 35.89 |
| HORVU0Hr1G016410.1 | Barley | extracellular | 36.65 | 35.89 |
| Zm00001d017734_P001 | Maize | cytosol | 58.36 | 35.81 |
| HORVU2Hr1G097510.1 | Barley | extracellular, mitochondrion, plastid | 34.88 | 35.25 |
| HORVU5Hr1G019100.1 | Barley | extracellular, plasma membrane | 44.13 | 35.13 |
| HORVU6Hr1G060410.7 | Barley | extracellular | 33.45 | 35.07 |
| HORVU0Hr1G018320.1 | Barley | extracellular | 35.59 | 34.6 |
| HORVU2Hr1G013340.1 | Barley | extracellular | 34.88 | 33.56 |
| HORVU2Hr1G097490.1 | Barley | plastid | 37.01 | 33.44 |
| HORVU4Hr1G088080.4 | Barley | plastid | 45.2 | 31.51 |
| HORVU4Hr1G088140.3 | Barley | extracellular | 33.1 | 28.88 |
| HORVU5Hr1G092910.9 | Barley | plastid | 36.65 | 24.88 |
| HORVU4Hr1G081990.2 | Barley | extracellular | 23.13 | 23.21 |
| HORVU4Hr1G081800.6 | Barley | extracellular, golgi, plastid | 23.13 | 21.74 |
| HORVU1Hr1G052290.4 | Barley | extracellular | 20.64 | 20.94 |
| HORVU7Hr1G119340.3 | Barley | extracellular, golgi, plastid | 20.64 | 18.77 |
| HORVU7Hr1G119200.1 | Barley | golgi, plastid, vacuole | 20.28 | 18.04 |
| HORVU7Hr1G119220.1 | Barley | extracellular, golgi, plastid | 18.86 | 16.93 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | UniProt:A0A287Q022 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom |
| InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019953 | EnsemblPlantsGene:HORVU4Hr1G087070 | EnsemblPlants:HORVU4Hr1G087070.2 | InterPro:IPR007112 |
| InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 | PFAM:PF03330 |
| PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF21 |
| InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | TMHMM:TMhelix |
| UniParc:UPI000B473724 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:635967644..635972856
Molecular Weight (calculated)
30447.2 Da
IEP (calculated)
7.923
GRAVY (calculated)
-0.419
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: SIADTQQQQR NQDLANQLKM ASSSALLVAA VLAVVVCGAH GIAKVPCGPN ITATYVSEWK DAKTTWYGKP TGAGPKDNGG ACGYKEVDKA PFFGMTSCGN
101: VPIFKDGRGC GSCFELKCTK PEACSGEPTI VTITDKNEEP IAAYHFDLSG HAFGTMAKKG QEQKLRDAGE VEIKFRRVKC KYPEGTKVNF HVEKGSSPNY
201: LALVVKFLQG DGDVVAVDIK PKGKDKWIEL KESWGAVWRI DTPDKLIGPF SVRYTTEGGT KTVAEDVIPE GWKPDTSYET K
101: VPIFKDGRGC GSCFELKCTK PEACSGEPTI VTITDKNEEP IAAYHFDLSG HAFGTMAKKG QEQKLRDAGE VEIKFRRVKC KYPEGTKVNF HVEKGSSPNY
201: LALVVKFLQG DGDVVAVDIK PKGKDKWIEL KESWGAVWRI DTPDKLIGPF SVRYTTEGGT KTVAEDVIPE GWKPDTSYET K
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.