Factsheet for HORVU4Hr1G081990.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G498900.1	Wheat	extracellular	91.43	93.09
TraesCS4D01G323600.1	Wheat	extracellular	91.79	92.78
TraesCS4B01G326900.1	Wheat	extracellular	91.07	92.73
EER95568	Sorghum	extracellular	78.93	81.85
Os03t0132200-01	Rice	extracellular, plastid	78.57	78.85
Zm00001d048344_P002	Maize	extracellular	76.43	78.1
Zm00001d027520_P001	Maize	extracellular	76.79	77.34
HORVU4Hr1G081800.6	Barley	extracellular, golgi, plastid	80.0	74.92
HORVU1Hr1G052290.4	Barley	extracellular	65.71	66.43
GSMUA_Achr11P...	Banana	extracellular	60.36	63.53
GSMUA_Achr5P19030_001	Banana	extracellular	59.64	63.26
GSMUA_Achr5P11590_001	Banana	extracellular	57.86	62.07
PGSC0003DMT400047948	Potato	extracellular	55.0	59.23
Solyc01g112000.2.1	Tomato	extracellular	54.64	58.62
GSMUA_Achr11P...	Banana	extracellular	54.64	57.74
VIT_03s0038g03430.t01	Wine grape	extracellular	53.21	57.53
GSMUA_AchrUn_...	Banana	extracellular	38.57	57.45
KRH24119	Soybean	extracellular	52.86	56.7
KRH29091	Soybean	extracellular	51.79	55.98
AT4G38400.1	Thale cress	extracellular	52.86	55.85
AT3G45970.1	Thale cress	extracellular	52.14	55.09
Bra011899.1-P	Field mustard	extracellular	52.86	55.02
CDY61895	Canola	extracellular	52.86	55.02
CDY69288	Canola	extracellular	51.79	54.92
Bra033563.1-P	Field mustard	extracellular	51.79	54.92
CDY52801	Canola	extracellular	52.5	54.65
AT3G45960.2	Thale cress	extracellular	51.07	54.37
CDY64278	Canola	extracellular	51.07	53.96
CDY72634	Canola	extracellular	50.71	53.58
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	58.21	53.09
HORVU7Hr1G119340.3	Barley	extracellular, golgi, plastid	45.0	40.78
HORVU7Hr1G119200.1	Barley	golgi, plastid, vacuole	43.21	38.29
HORVU7Hr1G119220.1	Barley	extracellular, golgi, plastid	40.71	36.42
HORVU2Hr1G097510.1	Barley	extracellular, mitochondrion, plastid	30.0	30.22
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	25.0	29.54
HORVU2Hr1G013360.1	Barley	extracellular	26.07	29.08
HORVU2Hr1G097480.1	Barley	extracellular	28.93	28.62
HORVU3Hr1G076110.1	Barley	cytosol, extracellular	13.93	28.26
HORVU0Hr1G016380.2	Barley	extracellular	26.43	27.92
HORVU3Hr1G105170.1	Barley	plastid	25.71	27.38
HORVU3Hr1G073140.1	Barley	plastid	25.71	27.38
HORVU6Hr1G055090.1	Barley	extracellular	26.07	27.24
HORVU6Hr1G060410.7	Barley	extracellular	25.36	26.49
HORVU6Hr1G063180.1	Barley	extracellular	27.14	26.48
HORVU0Hr1G016410.1	Barley	extracellular	27.14	26.48
HORVU3Hr1G001920.2	Barley	extracellular	26.43	26.33
HORVU4Hr1G086830.1	Barley	extracellular	24.29	25.56
HORVU3Hr1G105180.1	Barley	extracellular	27.86	25.49
HORVU3Hr1G073120.1	Barley	extracellular	27.86	25.49
HORVU1Hr1G054210.1	Barley	extracellular	24.64	25.46
HORVU2Hr1G097490.1	Barley	plastid	28.21	25.4
HORVU0Hr1G005490.1	Barley	extracellular	25.71	25.17
HORVU2Hr1G013340.1	Barley	extracellular	26.07	25.0
HORVU0Hr1G018320.1	Barley	extracellular	25.71	24.91
HORVU1Hr1G053300.1	Barley	extracellular	23.93	24.19
HORVU4Hr1G086930.1	Barley	extracellular	23.21	23.72
HORVU6Hr1G005760.1	Barley	extracellular	23.93	23.51
HORVU4Hr1G087070.2	Barley	extracellular, mitochondrion, peroxisome	23.21	23.13
HORVU6Hr1G005810.3	Barley	extracellular	24.64	22.77
HORVU3Hr1G105520.1	Barley	extracellular	27.86	22.61
HORVU1Hr1G054240.2	Barley	plastid	24.64	21.77
HORVU5Hr1G019100.1	Barley	extracellular, plasma membrane	26.43	20.96
HORVU5Hr1G092910.9	Barley	plastid	26.79	18.12
HORVU4Hr1G088080.4	Barley	plastid	25.36	17.62
HORVU4Hr1G088140.3	Barley	extracellular	18.93	16.46

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.2	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	EnsemblPlantsGene:HORVU4Hr1G081990	EnsemblPlants:HORVU4Hr1G081990.2	InterPro:IPR007112
InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	UniProt:M0WQL2	PFAM:PF01357	PFAM:PF03330
PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF4	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI00029665E5	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:620604089..620606839

Molecular Weight (calculated)

30130.2 Da

IEP (calculated)

9.501

GRAVY (calculated)

-0.028

Length

280 amino acids

Sequence
(BLAST)

001: MAVSVCLGSS PSTPLLPPLL FLFFLFCSLP SLASACDRCA HHSKAAFYTS SLTLAAGSCG YGTAAASFNG GLLAAAGTAL YRGGVGCGAC FQVRCKDKKL
101: CSGAGARVVV TDRARTRTNR TDLVLSSPAF AAMARPGMAA RLTKLSAVDV EYKRVPCEYK GKNLSLRVEE RSRAPNKLAV RFLYQGGQTD IVAVDVAKVG
201: SSSWKFMTRE HGPAWSTRQA PAGPLQFRVV VTGGYDGKWV WADREVLPRR WRAGEVYDTG VQITDIAQEG CFPCDTHEWR

Best Arabidopsis Sequence Match ( AT3G45970.1 )
(BLAST)

001: MGSFLFLIVV IFLFSSSVNA CDRCLHRSKA AYFSSASALS SGACAYGSMA TSFFAGHIAA AIPSIYKDGA GCGACFQVRC KNPKLCSTKG TIVMITDLNK
101: SNQTDLVLSS RAFRAMAKPI VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID IAQVGSSPNW GYMTRSHGAV
201: WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK IYDAGVQITD IAQEGCDPCD AHIWN

Arabidopsis Description

EXLA1Expansin-like A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.