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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d027520_P001 Maize extracellular 89.26 86.69
Zm00001d048344_P002 Maize extracellular 86.3 85.04
TraesCS4B01G326900.1 Wheat extracellular 82.59 81.09
TraesCS4D01G323600.1 Wheat extracellular 82.59 80.51
TraesCS5A01G498900.1 Wheat extracellular 81.85 80.36
HORVU4Hr1G081990.2 Barley extracellular 81.85 78.93
TraesCS4B01G327200.1 Wheat extracellular 76.3 76.87
Os03t0132200-01 Rice extracellular, plastid 79.26 76.7
TraesCS4D01G324000.1 Wheat extracellular 77.41 76.56
TraesCS5A01G499300.1 Wheat nucleus 77.04 76.19
TraesCS4D01G323900.1 Wheat golgi 74.07 73.8
TraesCS5A01G499200.1 Wheat extracellular 70.37 72.24
KXG38992 Sorghum extracellular 73.33 70.21
TraesCS4B01G327100.1 Wheat golgi 69.63 69.37
HORVU4Hr1G081800.6 Barley extracellular, golgi, plastid 76.67 69.23
TraesCS5A01G499100.1 Wheat extracellular 62.59 67.6
TraesCS4D01G323800.2 Wheat extracellular 70.37 62.91
GSMUA_Achr11P... Banana extracellular 61.48 62.41
GSMUA_Achr5P19030_001 Banana extracellular 60.37 61.74
GSMUA_Achr5P11590_001 Banana extracellular 58.52 60.54
GSMUA_Achr11P... Banana extracellular 57.41 58.49
PGSC0003DMT400047948 Potato extracellular 55.56 57.69
KRH24119 Soybean extracellular 55.19 57.09
Solyc01g112000.2.1 Tomato extracellular 55.19 57.09
VIT_03s0038g03430.t01 Wine grape extracellular 54.44 56.76
EER99370 Sorghum extracellular 57.04 56.2
KRH29091 Soybean extracellular 53.7 55.98
GSMUA_AchrUn_... Banana extracellular 38.15 54.79
AT3G45960.2 Thale cress extracellular 52.96 54.37
AT3G45970.1 Thale cress extracellular 53.33 54.34
AT4G38400.1 Thale cress extracellular 53.33 54.34
Bra033563.1-P Field mustard extracellular 52.96 54.17
CDY69288 Canola extracellular 52.96 54.17
Bra011899.1-P Field mustard extracellular 53.33 53.53
CDY61895 Canola extracellular 53.33 53.53
CDY64278 Canola extracellular 52.22 53.21
CDY72634 Canola extracellular 52.22 53.21
CDY52801 Canola extracellular 52.96 53.16
GSMUA_Achr1P02170_001 Banana extracellular, peroxisome, plastid 58.89 51.79
EES11234 Sorghum extracellular 28.89 29.66
EER88254 Sorghum extracellular 28.15 29.34
KXG19818 Sorghum extracellular 27.78 28.96
OQU89980 Sorghum extracellular, plasma membrane, vacuole 23.7 28.44
EES05780 Sorghum extracellular 30.37 27.8
EES11233 Sorghum extracellular 29.63 27.78
EES07508 Sorghum extracellular 30.0 27.55
KXG20919 Sorghum plastid 44.81 27.31
EES07509 Sorghum extracellular 26.3 26.89
EES11235 Sorghum extracellular 28.89 26.8
OQU93456 Sorghum cytosol, extracellular 20.37 25.94
EER91945 Sorghum extracellular 26.3 25.72
EER91947 Sorghum extracellular 25.56 25.65
EER91942 Sorghum extracellular 25.19 25.56
EER93754 Sorghum extracellular 27.41 24.18
EER91948 Sorghum extracellular 24.81 24.1
OQU92157 Sorghum extracellular 27.41 24.03
EER94500 Sorghum extracellular 25.56 23.79
EER98447 Sorghum extracellular 27.04 23.78
KXG38969 Sorghum extracellular 23.33 23.68
KXG40417 Sorghum mitochondrion 25.93 23.57
OQU93455 Sorghum extracellular 22.22 23.44
KXG40416 Sorghum extracellular, vacuole 27.78 23.44
EER95684 Sorghum extracellular 22.96 23.31
EER95683 Sorghum extracellular 22.96 23.31
EER94537 Sorghum extracellular 22.96 23.31
KXG38972 Sorghum extracellular 22.96 23.31
OQU93459 Sorghum extracellular 22.96 23.31
OQU93458 Sorghum extracellular 22.96 23.31
OQU93457 Sorghum extracellular 22.96 23.31
EER98449 Sorghum extracellular 26.67 23.08
EER91949 Sorghum extracellular 24.07 23.05
EER94506 Sorghum extracellular 24.07 23.05
EES05488 Sorghum extracellular 22.96 22.71
EES05315 Sorghum extracellular 26.67 22.64
KXG37946 Sorghum extracellular 27.04 22.46
OQU92156 Sorghum plastid 26.67 22.15
KXG38933 Sorghum mitochondrion 25.56 21.63
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:21.4.2.2EntrezGene:8057421UniProt:C5WZV2EnsemblPlants:EER95568
ProteinID:EER95568ProteinID:EER95568.1InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sf
GO:GO:0005575GO:GO:0005576InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908
PFAM:PF01357PFAM:PF03330PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692
PANTHER:PTHR31692:SF4InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfEnsemblPlantsGene:SORBI_3001G516500SUPFAM:SSF49590SUPFAM:SSF50685
unigene:Sbi.6485SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A83157RefSeq:XP_002468570.1SEG:seg
Description
hypothetical protein
Coordinates
chr1:-:78317740..78320162
Molecular Weight (calculated)
29213.0 Da
IEP (calculated)
8.830
GRAVY (calculated)
-0.021
Length
270 amino acids
Sequence
(BLAST)
001: MAVLTAASTT LPLLLLVWLW LPLLASACDR CVRHSKAAYY TSSLTLAGGS CGYGTEAASF SAGFLAAASP ALYRAGVGCG ACFQVRCKDK KLCAAAGARV
101: VVTDRARTNR TDLVLSSTAF AAMARPGVAK RLAALRTVDV EYKRVPCEYK HRNLSVRVED KSRAPGDLAI RFLYQGGQTD IVAVDVAQVG SSNWKFMTRD
201: NGPAWSTSQA PPGPLQLRVV VTGGYDGKWV WADREVLPRR WRAGEVYDTG VQITDIAQEG CFPCDTHEWE
Best Arabidopsis Sequence Match ( AT3G45970.1 )
(BLAST)
001: MGSFLFLIVV IFLFSSSVNA CDRCLHRSKA AYFSSASALS SGACAYGSMA TSFFAGHIAA AIPSIYKDGA GCGACFQVRC KNPKLCSTKG TIVMITDLNK
101: SNQTDLVLSS RAFRAMAKPI VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID IAQVGSSPNW GYMTRSHGAV
201: WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK IYDAGVQITD IAQEGCDPCD AHIWN
Arabidopsis Description
EXLA1Expansin-like A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.