Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G323600.1 | Wheat | extracellular | 97.45 | 96.75 |
| TraesCS5A01G498900.1 | Wheat | extracellular | 96.73 | 96.73 |
| HORVU4Hr1G081990.2 | Barley | extracellular | 92.73 | 91.07 |
| TraesCS4B01G327200.1 | Wheat | extracellular | 81.09 | 83.21 |
| EER95568 | Sorghum | extracellular | 81.09 | 82.59 |
| Os03t0132200-01 | Rice | extracellular, plastid | 80.36 | 79.21 |
| Zm00001d048344_P002 | Maize | extracellular | 78.91 | 79.2 |
| Zm00001d027520_P001 | Maize | extracellular | 79.64 | 78.78 |
| TraesCS4B01G327100.1 | Wheat | golgi | 75.64 | 76.75 |
| TraesCS1B01G217200.1 | Wheat | extracellular | 69.09 | 69.09 |
| GSMUA_Achr11P... | Banana | extracellular | 61.45 | 63.53 |
| GSMUA_Achr5P19030_001 | Banana | extracellular | 60.36 | 62.88 |
| GSMUA_Achr5P11590_001 | Banana | extracellular | 58.55 | 61.69 |
| PGSC0003DMT400047948 | Potato | extracellular | 56.73 | 60.0 |
| Solyc01g112000.2.1 | Tomato | extracellular | 56.73 | 59.77 |
| VIT_03s0038g03430.t01 | Wine grape | extracellular | 54.55 | 57.92 |
| GSMUA_Achr11P... | Banana | extracellular | 55.64 | 57.74 |
| KRH24119 | Soybean | extracellular | 54.18 | 57.09 |
| KRH29091 | Soybean | extracellular | 53.45 | 56.76 |
| GSMUA_AchrUn_... | Banana | extracellular | 38.55 | 56.38 |
| AT4G38400.1 | Thale cress | extracellular | 53.82 | 55.85 |
| AT3G45970.1 | Thale cress | extracellular | 53.45 | 55.47 |
| Bra033563.1-P | Field mustard | extracellular | 52.73 | 54.92 |
| CDY69288 | Canola | extracellular | 52.73 | 54.92 |
| AT3G45960.2 | Thale cress | extracellular | 52.0 | 54.37 |
| Bra011899.1-P | Field mustard | extracellular | 53.09 | 54.28 |
| CDY61895 | Canola | extracellular | 53.09 | 54.28 |
| CDY64278 | Canola | extracellular | 52.0 | 53.96 |
| CDY52801 | Canola | extracellular | 52.73 | 53.9 |
| CDY72634 | Canola | extracellular | 51.64 | 53.58 |
| GSMUA_Achr1P02170_001 | Banana | extracellular, peroxisome, plastid | 58.18 | 52.12 |
| TraesCS7B01G468700.1 | Wheat | endoplasmic reticulum, extracellular | 45.45 | 39.56 |
| TraesCS7B01G469200.1 | Wheat | endoplasmic reticulum, extracellular | 44.0 | 37.93 |
| TraesCS2B01G122100.1 | Wheat | extracellular | 22.55 | 32.46 |
| TraesCS2B01G095600.1 | Wheat | extracellular | 29.45 | 31.76 |
| TraesCS2B01G095700.1 | Wheat | extracellular | 28.73 | 31.35 |
| TraesCS2B01G607400.1 | Wheat | extracellular | 28.36 | 31.33 |
| TraesCS2B01G432100.1 | Wheat | extracellular | 28.36 | 29.89 |
| TraesCS2B01G432300.1 | Wheat | plastid | 27.64 | 29.01 |
| TraesCS2B01G432200.1 | Wheat | extracellular, plastid | 29.45 | 28.83 |
| TraesCS6B01G275800.1 | Wheat | extracellular | 28.73 | 27.53 |
| TraesCS6B01G046100.1 | Wheat | extracellular | 26.55 | 26.74 |
| TraesCS6B01G046000.1 | Wheat | extracellular | 26.55 | 26.74 |
| TraesCS6B01G046200.1 | Wheat | extracellular | 26.55 | 26.74 |
| TraesCS6B01G264400.1 | Wheat | extracellular | 25.82 | 26.49 |
| TraesCS1B01G222300.1 | Wheat | extracellular | 25.45 | 26.42 |
| TraesCS2B01G480700.1 | Wheat | extracellular | 25.45 | 26.42 |
| TraesCS6B01G046400.1 | Wheat | extracellular | 26.18 | 26.37 |
| TraesCS6B01G046300.1 | Wheat | extracellular | 26.18 | 26.37 |
| TraesCS1B01G226000.2 | Wheat | extracellular | 25.45 | 25.93 |
| TraesCS3B01G014300.1 | Wheat | extracellular, nucleus | 25.82 | 25.91 |
| TraesCS1B01G225800.1 | Wheat | extracellular | 25.45 | 25.83 |
| TraesCS3B01G535800.1 | Wheat | extracellular | 26.91 | 25.61 |
| TraesCS6B01G275700.1 | Wheat | extracellular | 26.18 | 24.91 |
| TraesCS3B01G526800.1 | Wheat | extracellular | 26.91 | 24.67 |
| TraesCS6B01G245700.1 | Wheat | extracellular | 26.55 | 24.66 |
| TraesCS2B01G390000.1 | Wheat | extracellular | 25.09 | 24.56 |
| TraesCS3B01G524500.1 | Wheat | extracellular | 27.64 | 24.44 |
| TraesCS1B01G225900.1 | Wheat | extracellular, mitochondrion, plastid | 26.18 | 24.16 |
| TraesCS4B01G362100.1 | Wheat | extracellular | 23.64 | 24.07 |
| TraesCS5B01G376500.1 | Wheat | extracellular | 26.91 | 23.95 |
| TraesCS4B01G362600.1 | Wheat | extracellular, unclear | 23.27 | 23.7 |
| TraesCS4B01G362500.1 | Wheat | extracellular | 23.27 | 23.7 |
| TraesCS4B01G375200.1 | Wheat | extracellular | 25.09 | 23.63 |
| TraesCS1B01G226100.1 | Wheat | extracellular | 26.55 | 23.4 |
| TraesCS3B01G014400.1 | Wheat | cytosol | 20.73 | 22.98 |
| TraesCS1B01G225700.1 | Wheat | extracellular | 25.09 | 22.85 |
| TraesCS5B01G079400.1 | Wheat | extracellular, plasma membrane | 26.18 | 21.11 |
| TraesCS4B01G375600.1 | Wheat | extracellular | 25.82 | 20.82 |
| TraesCS7B01G469100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 44.36 | 18.94 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.2 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 |
| InterPro:IPR036908 | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 |
| PANTHER:PTHR31692 | PANTHER:PTHR31692:SF4 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4B01G326900 | EnsemblPlants:TraesCS4B01G326900.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr4B:+:617765289..617766719
Molecular Weight (calculated)
29528.6 Da
IEP (calculated)
9.458
GRAVY (calculated)
-0.013
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSVCLSAS PTILLLPLLF LLTIPSLASA CDRCARHSKA AYYTSSLTLA AGSCGYGTAA ASFNGGLLAA AGPALYRGGV GCGACFQVRC KDKKLCSGAG
101: ARVVVTDRAR MKTNRTDLVL SSPAFAAMAR PGMAARLTKL RAVDVEYKRV PCEYKGKNLS VRVEERSRAP SELAVRFLYQ GGQTDIVAVD VAKVGSSSWK
201: FMTREHGPAW STRQAPAGPL QFRVVVTGGY DGKWVWADRE VLPSRWRAGE VYDTGVQITD VAQEGCFPCD TQEWR
101: ARVVVTDRAR MKTNRTDLVL SSPAFAAMAR PGMAARLTKL RAVDVEYKRV PCEYKGKNLS VRVEERSRAP SELAVRFLYQ GGQTDIVAVD VAKVGSSSWK
201: FMTREHGPAW STRQAPAGPL QFRVVVTGGY DGKWVWADRE VLPSRWRAGE VYDTGVQITD VAQEGCFPCD TQEWR
001: MGSFLFLIVV IFLFSSSVNA CDRCLHRSKA AYFSSASALS SGACAYGSMA TSFFAGHIAA AIPSIYKDGA GCGACFQVRC KNPKLCSTKG TIVMITDLNK
101: SNQTDLVLSS RAFRAMAKPI VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID IAQVGSSPNW GYMTRSHGAV
201: WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK IYDAGVQITD IAQEGCDPCD AHIWN
101: SNQTDLVLSS RAFRAMAKPI VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID IAQVGSSPNW GYMTRSHGAV
201: WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK IYDAGVQITD IAQEGCDPCD AHIWN
Arabidopsis Description
EXLA1Expansin-like A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.