Factsheet for TraesCS4B01G375200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G538000.1	Wheat	extracellular	93.15	95.77
TraesCS4D01G361900.1	Wheat	extracellular	89.73	88.22
Zm00001d027281_P001	Maize	extracellular	69.86	74.73
KXG40417	Sorghum	mitochondrion	70.55	69.36
TraesCS1B01G226000.2	Wheat	extracellular	61.99	67.04
Os03t0102500-01	Rice	extracellular	60.96	64.49
TraesCS1B01G226100.1	Wheat	extracellular	67.12	62.82
TraesCS3B01G014400.1	Wheat	cytosol	53.08	62.5
TraesCS3B01G014300.1	Wheat	extracellular, nucleus	57.88	61.68
TraesCS6B01G245700.1	Wheat	extracellular	60.96	60.14
TraesCS1B01G225700.1	Wheat	extracellular	59.25	57.28
TraesCS6B01G046300.1	Wheat	extracellular	52.74	56.41
TraesCS6B01G046200.1	Wheat	extracellular	52.74	56.41
TraesCS6B01G046000.1	Wheat	extracellular	52.74	56.41
TraesCS3B01G526800.1	Wheat	extracellular	57.88	56.33
TraesCS6B01G046100.1	Wheat	extracellular	52.4	56.04
TraesCS6B01G046400.1	Wheat	extracellular	52.05	55.68
TraesCS1B01G225900.1	Wheat	extracellular, mitochondrion, plastid	56.51	55.37
TraesCS3B01G524500.1	Wheat	extracellular	57.53	54.02
TraesCS1B01G225800.1	Wheat	extracellular	49.32	53.14
TraesCS4B01G375600.1	Wheat	extracellular	58.9	50.44
TraesCS2B01G607400.1	Wheat	extracellular	41.78	49.0
TraesCS5B01G079400.1	Wheat	extracellular, plasma membrane	56.85	48.68
TraesCS2B01G432300.1	Wheat	plastid	43.49	48.47
TraesCS1B01G222300.1	Wheat	extracellular	43.49	47.92
GSMUA_AchrUn_...	Banana	extracellular	14.73	46.74
TraesCS4B01G362100.1	Wheat	extracellular	42.81	46.3
TraesCS2B01G095600.1	Wheat	extracellular	40.41	46.27
TraesCS4B01G362600.1	Wheat	extracellular, unclear	42.47	45.93
TraesCS4B01G362500.1	Wheat	extracellular	42.47	45.93
TraesCS2B01G480700.1	Wheat	extracellular	41.1	45.28
TraesCS2B01G095700.1	Wheat	extracellular	39.04	45.24
TraesCS2B01G432100.1	Wheat	extracellular	40.41	45.21
TraesCS6B01G275800.1	Wheat	extracellular	43.15	43.9
TraesCS2B01G122100.1	Wheat	extracellular	28.42	43.46
TraesCS6B01G275700.1	Wheat	extracellular	42.47	42.91
TraesCS3B01G535800.1	Wheat	extracellular	42.12	42.56
TraesCS2B01G432200.1	Wheat	extracellular, plastid	40.07	41.64
TraesCS5B01G376500.1	Wheat	extracellular	41.1	38.84
TraesCS6B01G264400.1	Wheat	extracellular	34.25	37.31
TraesCS2B01G390000.1	Wheat	extracellular	32.88	34.16
TraesCS4B01G327200.1	Wheat	extracellular	23.29	25.37
TraesCS4B01G326900.1	Wheat	extracellular	23.63	25.09
TraesCS4B01G327100.1	Wheat	golgi	22.6	24.35
TraesCS1B01G217200.1	Wheat	extracellular	21.23	22.55
TraesCS7B01G468700.1	Wheat	endoplasmic reticulum, extracellular	19.52	18.04
TraesCS7B01G469200.1	Wheat	endoplasmic reticulum, extracellular	18.49	16.93
TraesCS7B01G469100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	18.49	8.39

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PFscan:PS51257
PANTHER:PTHR31692	PANTHER:PTHR31692:SF20	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4B01G375200	EnsemblPlants:TraesCS4B01G375200.1	SEG:seg	:

Description

No Description!

Coordinates

chr4B:-:659329338..659331124

Molecular Weight (calculated)

31685.9 Da

IEP (calculated)

9.198

GRAVY (calculated)

-0.287

Length

292 amino acids

Sequence
(BLAST)

001: MGKPQLALRG VAAPPVVLAV LLLLSCSLHG ARAEEGESAG LDTGLAGGEP GMVNTSAVSI GQSGVARATW YGAPNGAGPY DNGGACGFKN VNRYPFMAMT
101: SCGNQPLFKD GKGCGACYKI KCTKHKACSG RQETVVITDM NYYPVAPYHF DLSGTAFGKL AKPGRNDELR HAGIIDIQFT RVSCEFPGLK VGFHVEEGSN
201: AVYMAILVEY ENGDGDVVQV DLMESGRRGR GGRWTRMRES WGSIWRLDSN HRLQAPFSLR IRNESGKTLV ARNVIPKNWR PNTFYRSIVQ YS

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.