Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G362500.1 | Wheat | extracellular | 99.63 | 99.63 |
| TraesCS4B01G362600.1 | Wheat | extracellular, unclear | 99.63 | 99.63 |
| TraesCS5A01G530100.1 | Wheat | extracellular | 98.52 | 98.52 |
| TraesCS5A01G530700.1 | Wheat | extracellular | 98.15 | 98.15 |
| TraesCS4D01G355100.1 | Wheat | extracellular | 97.41 | 97.41 |
| TraesCS4D01G355800.1 | Wheat | extracellular | 97.41 | 97.41 |
| TraesCS4D01G355700.1 | Wheat | extracellular | 95.19 | 95.9 |
| HORVU4Hr1G086830.1 | Barley | extracellular | 87.04 | 88.35 |
| HORVU4Hr1G086930.1 | Barley | extracellular | 85.19 | 83.94 |
| HORVU4Hr1G087070.2 | Barley | extracellular, mitochondrion, peroxisome | 85.19 | 81.85 |
| OQU93456 | Sorghum | cytosol, extracellular | 52.59 | 66.98 |
| Os03t0106500-01 | Rice | plasma membrane | 65.19 | 65.92 |
| Os03t0106900-00 | Rice | extracellular | 65.19 | 65.92 |
| Zm00001d017736_P001 | Maize | cytosol | 47.04 | 65.8 |
| Zm00001d017735_P001 | Maize | extracellular | 61.11 | 65.22 |
| Zm00001d017740_P001 | Maize | extracellular | 61.11 | 65.22 |
| EER95684 | Sorghum | extracellular | 63.7 | 64.66 |
| OQU93459 | Sorghum | extracellular | 63.33 | 64.29 |
| OQU93458 | Sorghum | extracellular | 63.33 | 64.29 |
| OQU93457 | Sorghum | extracellular | 63.33 | 64.29 |
| EER95683 | Sorghum | extracellular | 63.33 | 64.29 |
| Os03t0106700-00 | Rice | extracellular | 54.07 | 64.04 |
| Zm00001d048384_P001 | Maize | extracellular | 63.33 | 63.57 |
| Os03t0106800-01 | Rice | plasma membrane | 62.59 | 63.3 |
| OQU93455 | Sorghum | extracellular | 60.0 | 63.28 |
| Zm00001d040609_P001 | Maize | extracellular | 62.59 | 62.83 |
| Zm00001d040608_P001 | Maize | extracellular | 62.22 | 62.69 |
| Zm00001d017737_P001 | Maize | extracellular | 62.22 | 62.22 |
| TraesCS1B01G222300.1 | Wheat | extracellular | 60.37 | 61.51 |
| Zm00001d017732_P001 | Maize | extracellular | 61.48 | 61.48 |
| Zm00001d017733_P001 | Maize | extracellular | 61.48 | 61.48 |
| Zm00001d017731_P001 | Maize | extracellular | 50.74 | 58.8 |
| TraesCS2B01G480700.1 | Wheat | extracellular | 52.96 | 53.96 |
| TraesCS3B01G014400.1 | Wheat | cytosol | 44.07 | 47.98 |
| TraesCS6B01G046200.1 | Wheat | extracellular | 48.15 | 47.62 |
| TraesCS6B01G046000.1 | Wheat | extracellular | 48.15 | 47.62 |
| TraesCS6B01G046300.1 | Wheat | extracellular | 47.78 | 47.25 |
| TraesCS6B01G046100.1 | Wheat | extracellular | 47.78 | 47.25 |
| TraesCS6B01G046400.1 | Wheat | extracellular | 47.78 | 47.25 |
| TraesCS3B01G014300.1 | Wheat | extracellular, nucleus | 47.41 | 46.72 |
| TraesCS1B01G226000.2 | Wheat | extracellular | 46.3 | 46.3 |
| TraesCS1B01G225800.1 | Wheat | extracellular | 44.81 | 44.65 |
| TraesCS1B01G225900.1 | Wheat | extracellular, mitochondrion, plastid | 48.15 | 43.62 |
| TraesCS6B01G245700.1 | Wheat | extracellular | 47.78 | 43.58 |
| TraesCS1B01G225700.1 | Wheat | extracellular | 48.15 | 43.05 |
| TraesCS4B01G375200.1 | Wheat | extracellular | 46.3 | 42.81 |
| TraesCS3B01G526800.1 | Wheat | extracellular | 47.41 | 42.67 |
| TraesCS3B01G524500.1 | Wheat | extracellular | 48.52 | 42.12 |
| TraesCS2B01G432300.1 | Wheat | plastid | 40.74 | 41.98 |
| TraesCS2B01G095600.1 | Wheat | extracellular | 39.26 | 41.57 |
| TraesCS2B01G607400.1 | Wheat | extracellular | 37.78 | 40.96 |
| TraesCS2B01G122100.1 | Wheat | extracellular | 28.52 | 40.31 |
| TraesCS2B01G095700.1 | Wheat | extracellular | 36.67 | 39.29 |
| GSMUA_AchrUn_... | Banana | extracellular | 13.33 | 39.13 |
| TraesCS2B01G432100.1 | Wheat | extracellular | 37.78 | 39.08 |
| TraesCS6B01G275800.1 | Wheat | extracellular | 41.48 | 39.02 |
| TraesCS1B01G226100.1 | Wheat | extracellular | 44.07 | 38.14 |
| TraesCS2B01G432200.1 | Wheat | extracellular, plastid | 39.63 | 38.08 |
| TraesCS4B01G375600.1 | Wheat | extracellular | 47.41 | 37.54 |
| TraesCS3B01G535800.1 | Wheat | extracellular | 40.0 | 37.37 |
| TraesCS6B01G275700.1 | Wheat | extracellular | 39.26 | 36.68 |
| TraesCS5B01G079400.1 | Wheat | extracellular, plasma membrane | 46.3 | 36.66 |
| Zm00001d017734_P001 | Maize | cytosol | 61.85 | 36.46 |
| TraesCS6B01G264400.1 | Wheat | extracellular | 34.44 | 34.7 |
| TraesCS5B01G376500.1 | Wheat | extracellular | 38.15 | 33.33 |
| TraesCS2B01G390000.1 | Wheat | extracellular | 32.22 | 30.96 |
| TraesCS4B01G327200.1 | Wheat | extracellular | 24.07 | 24.25 |
| TraesCS4B01G327100.1 | Wheat | golgi | 24.07 | 23.99 |
| TraesCS4B01G326900.1 | Wheat | extracellular | 24.07 | 23.64 |
| TraesCS1B01G217200.1 | Wheat | extracellular | 20.74 | 20.36 |
| TraesCS7B01G468700.1 | Wheat | endoplasmic reticulum, extracellular | 20.0 | 17.09 |
| TraesCS7B01G469200.1 | Wheat | endoplasmic reticulum, extracellular | 19.63 | 16.61 |
| TraesCS7B01G469100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 20.37 | 8.54 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 |
| PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 |
| PANTHER:PTHR31692:SF21 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4B01G362100 | EnsemblPlants:TraesCS4B01G362100.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr4B:+:651021982..651022878
Molecular Weight (calculated)
29038.5 Da
IEP (calculated)
7.988
GRAVY (calculated)
-0.427
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSSVLL VAAVLAAVVC GAHGIPKVPP GPNITASPAS YGNKWLDAKT TWYGKPTGAG PKDNGGACGY KEVDKAPFHG MTSCGNIPIF KDGRGCGSCF
101: ELKCTKPEAC SGEPTMVTIT DKNEEPIAPY HFDLSGHAFG SMAKKGEEQK LRDAGEVEIK FRRVKCKYPP GTKVNFHVEK SSNENYLALV IKFLQGDGDV
201: VGVDIKQKGE DKWTELNESW GAVWRIDTPH KLIGPFSVRY TTEGGTKTVV EDVIPKGWKA DTSYEAKGGY
101: ELKCTKPEAC SGEPTMVTIT DKNEEPIAPY HFDLSGHAFG SMAKKGEEQK LRDAGEVEIK FRRVKCKYPP GTKVNFHVEK SSNENYLALV IKFLQGDGDV
201: VGVDIKQKGE DKWTELNESW GAVWRIDTPH KLIGPFSVRY TTEGGTKTVV EDVIPKGWKA DTSYEAKGGY
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.