Factsheet for Os03t0106900-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 10
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0106500-01	Rice	plasma membrane	100.0	100.0
Os03t0106700-00	Rice	extracellular	81.65	95.61
Os03t0106800-01	Rice	plasma membrane	82.02	82.02
Zm00001d017736_P001	Maize	cytosol	50.56	69.95
Zm00001d017735_P001	Maize	extracellular	64.79	68.38
OQU93456	Sorghum	cytosol, extracellular	53.93	67.92
Zm00001d017740_P001	Maize	extracellular	63.67	67.19
TraesCS4B01G362500.1	Wheat	extracellular	66.29	65.56
TraesCS4B01G362600.1	Wheat	extracellular, unclear	66.29	65.56
OQU93455	Sorghum	extracellular	62.55	65.23
TraesCS4B01G362100.1	Wheat	extracellular	65.92	65.19
TraesCS4D01G355100.1	Wheat	extracellular	65.92	65.19
TraesCS4D01G355800.1	Wheat	extracellular	65.92	65.19
OQU93459	Sorghum	extracellular	64.79	65.04
OQU93458	Sorghum	extracellular	64.79	65.04
OQU93457	Sorghum	extracellular	64.79	65.04
EER95683	Sorghum	extracellular	64.79	65.04
EER95684	Sorghum	extracellular	64.79	65.04
Zm00001d040608_P001	Maize	extracellular	65.17	64.93
TraesCS5A01G530700.1	Wheat	extracellular	65.54	64.81
Zm00001d017732_P001	Maize	extracellular	65.54	64.81
Zm00001d048384_P001	Maize	extracellular	65.17	64.68
HORVU4Hr1G086830.1	Barley	extracellular	64.42	64.66
TraesCS4D01G355700.1	Wheat	extracellular	64.79	64.55
Zm00001d017737_P001	Maize	extracellular	65.17	64.44
Zm00001d017733_P001	Maize	extracellular	65.17	64.44
TraesCS5A01G530100.1	Wheat	extracellular	65.17	64.44
Zm00001d040609_P001	Maize	extracellular	64.79	64.31
Os10t0548600-01	Rice	plasma membrane	63.67	63.2
Zm00001d017731_P001	Maize	extracellular	55.06	63.09
HORVU4Hr1G086930.1	Barley	extracellular	62.92	61.31
HORVU4Hr1G087070.2	Barley	extracellular, mitochondrion, peroxisome	62.92	59.79
Os10t0555900-02	Rice	extracellular	50.19	50.0
Os03t0102700-01	Rice	plastid	51.31	49.1
Os10t0555600-01	Rice	extracellular	50.19	48.73
Os10t0555700-02	Rice	extracellular	45.69	46.74
Os03t0102500-01	Rice	extracellular	46.44	44.93
Os10t0556100-01	Rice	extracellular	46.82	43.71
Os04t0552000-00	Rice	extracellular	40.45	40.91
GSMUA_AchrUn_...	Banana	extracellular	13.86	40.22
Os04t0552200-00	Rice	plasma membrane	40.45	39.27
Os02t0658800-01	Rice	extracellular	41.95	38.36
Os05t0246300-01	Rice	extracellular	37.83	38.26
Zm00001d017734_P001	Maize	cytosol	65.54	38.21
Os02t0658600-00	Rice	plastid	38.58	37.73
Os02t0639500-01	Rice	extracellular	33.33	34.1
Os03t0645000-00	Rice	mitochondrion	38.58	32.91
Os07t0496250-01	Rice	extracellular	26.59	27.73
Os10t0542400-01	Rice	extracellular	25.47	24.73
Os03t0132200-01	Rice	extracellular, plastid	24.72	23.66
Os07t0475400-01	Rice	extracellular	22.85	22.1
Os04t0530100-01	Rice	extracellular, mitochondrion, vacuole	23.22	19.2
Os06t0725300-01	Rice	endoplasmic reticulum	21.72	18.53

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	EntrezGene:4331323	EntrezGene:4331326	ProteinID:AAK84682.1
ProteinID:AAN60487.1	ProteinID:AAN60491.1	ProteinID:ABF93536.1	ProteinID:ABF93540.1	EMBL:AF261270	EMBL:AK072792
ProteinID:BAF10600.2	ProteinID:BAF10603.1	ProteinID:BAS81873.1	ProteinID:BAS81878.1	ProteinID:EAZ25286.1	InterPro:Expan_Lol_pI
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043
GO:GO:0019953	GO:GO:0030312	GO:GO:0071555	UniProt:I3QD42	InterPro:IPR007112	InterPro:IPR007117
InterPro:IPR036749	InterPro:IPR036908	EMBL:JF969197	InterPro:LolPI	EnsemblPlantsGene:Os03g0106900	EnsemblPlants:Os03t0106900-00
PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31692	PANTHER:PTHR31692:SF21	UniProt:Q40638	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837
SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	EMBL:U31771	UniParc:UPI000009F0C0	RefSeq:XP_015629185.1
RefSeq:XP_015629913.1	SEG:seg	:	:	:	:

Description

BETA-EXPANSIN 1BBeta-expansin precursor (Beta-expansin 1). (Os03t0106900-00)

Coordinates

chr3:-:401132..402293

Molecular Weight (calculated)

28628.1 Da

IEP (calculated)

6.735

GRAVY (calculated)

-0.310

Length

267 amino acids

Sequence
(BLAST)

001: MASSSLLLAC VVVAAMVSAV SCGPPKVPPG PNITTSYGDK WLEAKATWYG APKGAGPKDN GGACGYKDVD KAPFLGMNSC GNDPIFKDGK GCGSCFEIKC
101: SKPEACSDKP ALIHVTDMND EPIAAYHFDL SGLAFGAMAK DGKDEELRKA GIIDTQFRRV KCKYPADTKI TFHIEKASNP NYLALLVKYV AGDGDVVEVE
201: IKEKGSEEWK ALKESWGAIW RIDTPKPLKG PFSVRVTTEG GEKIIAEDAI PDGWKADSVY KSNVQAK

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.