Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017740_P001 | Maize | extracellular | 91.48 | 97.63 |
| Zm00001d017735_P001 | Maize | extracellular | 91.48 | 97.63 |
| Zm00001d017732_P001 | Maize | extracellular | 97.41 | 97.41 |
| Zm00001d017733_P001 | Maize | extracellular | 97.04 | 97.04 |
| Zm00001d017736_P001 | Maize | cytosol | 68.52 | 95.85 |
| Zm00001d017741_P001 | Maize | extracellular | 54.44 | 92.45 |
| Zm00001d048384_P001 | Maize | extracellular | 91.85 | 92.19 |
| Zm00001d040609_P001 | Maize | extracellular | 91.85 | 92.19 |
| Zm00001d040608_P001 | Maize | extracellular | 91.11 | 91.79 |
| Zm00001d017731_P001 | Maize | extracellular | 74.81 | 86.7 |
| OQU93457 | Sorghum | extracellular | 83.7 | 84.96 |
| OQU93456 | Sorghum | cytosol, extracellular | 66.67 | 84.91 |
| EER95683 | Sorghum | extracellular | 83.33 | 84.59 |
| OQU93458 | Sorghum | extracellular | 83.33 | 84.59 |
| OQU93459 | Sorghum | extracellular | 83.33 | 84.59 |
| EER95684 | Sorghum | extracellular | 82.96 | 84.21 |
| OQU93455 | Sorghum | extracellular | 79.63 | 83.98 |
| Os03t0106800-01 | Rice | plasma membrane | 65.19 | 65.92 |
| Os03t0106500-01 | Rice | plasma membrane | 64.44 | 65.17 |
| Os03t0106900-00 | Rice | extracellular | 64.44 | 65.17 |
| HORVU4Hr1G086830.1 | Barley | extracellular | 62.22 | 63.16 |
| TraesCS4D01G355100.1 | Wheat | extracellular | 62.59 | 62.59 |
| TraesCS4D01G355800.1 | Wheat | extracellular | 62.59 | 62.59 |
| Os03t0106700-00 | Rice | extracellular | 52.59 | 62.28 |
| TraesCS4B01G362100.1 | Wheat | extracellular | 62.22 | 62.22 |
| TraesCS5A01G530700.1 | Wheat | extracellular | 62.22 | 62.22 |
| TraesCS4B01G362600.1 | Wheat | extracellular, unclear | 61.85 | 61.85 |
| TraesCS5A01G530100.1 | Wheat | extracellular | 61.85 | 61.85 |
| TraesCS4B01G362500.1 | Wheat | extracellular | 61.85 | 61.85 |
| TraesCS4D01G355700.1 | Wheat | extracellular | 61.11 | 61.57 |
| HORVU4Hr1G086930.1 | Barley | extracellular | 61.11 | 60.22 |
| HORVU4Hr1G087070.2 | Barley | extracellular, mitochondrion, peroxisome | 61.48 | 59.07 |
| Zm00001d047146_P001 | Maize | extracellular | 58.52 | 58.74 |
| Zm00001d047147_P001 | Maize | extracellular | 58.52 | 58.74 |
| Zm00001d047142_P001 | Maize | extracellular | 58.52 | 58.74 |
| Zm00001d047135_P011 | Maize | extracellular | 58.15 | 58.36 |
| Zm00001d017734_P001 | Maize | cytosol | 96.67 | 56.99 |
| Zm00001d029827_P001 | Maize | extracellular | 44.07 | 51.74 |
| Zm00001d029906_P001 | Maize | extracellular | 50.37 | 50.75 |
| Zm00001d047089_P001 | Maize | extracellular | 50.0 | 50.56 |
| Zm00001d029903_P002 | Maize | extracellular | 50.0 | 50.56 |
| Zm00001d047090_P002 | Maize | extracellular | 50.37 | 50.37 |
| Zm00001d047096_P001 | Maize | extracellular | 50.0 | 47.87 |
| Zm00001d047091_P001 | Maize | extracellular | 47.78 | 47.25 |
| Zm00001d029913_P001 | Maize | extracellular | 48.15 | 47.1 |
| Zm00001d029907_P001 | Maize | extracellular | 47.04 | 46.52 |
| Zm00001d029899_P001 | Maize | extracellular, mitochondrion | 48.52 | 46.45 |
| Zm00001d047093_P001 | Maize | extracellular | 45.19 | 46.21 |
| Zm00001d027281_P001 | Maize | extracellular | 46.67 | 46.15 |
| Zm00001d047094_P001 | Maize | extracellular | 47.41 | 45.88 |
| Zm00001d047087_P001 | Maize | extracellular | 47.04 | 44.41 |
| Zm00001d004586_P001 | Maize | extracellular | 50.74 | 43.77 |
| Zm00001d026171_P001 | Maize | extracellular | 31.11 | 43.08 |
| Zm00001d027283_P001 | Maize | extracellular | 50.37 | 42.77 |
| Zm00001d051368_P001 | Maize | extracellular | 24.81 | 42.41 |
| Zm00001d026170_P001 | Maize | extracellular | 40.0 | 41.22 |
| Zm00001d026169_P001 | Maize | extracellular | 43.7 | 40.41 |
| Zm00001d045861_P001 | Maize | mitochondrion | 39.26 | 40.0 |
| Zm00001d045792_P001 | Maize | extracellular | 39.63 | 39.63 |
| Zm00001d017494_P001 | Maize | extracellular | 43.33 | 39.53 |
| Zm00001d017495_P001 | Maize | extracellular | 42.96 | 39.46 |
| Zm00001d017493_P001 | Maize | extracellular | 38.15 | 38.58 |
| Zm00001d019560_P001 | Maize | plasma membrane | 40.74 | 35.71 |
| Zm00001d017377_P001 | Maize | extracellular | 34.81 | 35.07 |
| Zm00001d019557_P001 | Maize | extracellular, plastid | 32.22 | 30.1 |
| Zm00001d002860_P002 | Maize | extracellular | 32.96 | 29.18 |
| Zm00001d029783_P003 | Maize | extracellular | 24.44 | 24.0 |
| Zm00001d048344_P002 | Maize | extracellular | 23.7 | 23.36 |
| Zm00001d027520_P001 | Maize | extracellular | 23.7 | 23.02 |
| Zm00001d006360_P001 | Maize | extracellular | 22.96 | 22.79 |
| Zm00001d014826_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 21.11 | 17.87 |
| Zm00001d033231_P003 | Maize | extracellular | 39.63 | 14.99 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | UniProt:A0A1D6HH72 | ProteinID:AQK73907.1 | InterPro:Expan_Lol_pI |
| InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0008150 | GO:GO:0019953 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 |
| InterPro:LolPI | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 |
| PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF21 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 |
| SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM | UniParc:UPI0002221376 | EnsemblPlantsGene:Zm00001d017737 | EnsemblPlants:Zm00001d017737_P001 |
| EnsemblPlants:Zm00001d017737_T001 | SEG:seg | : | : | : | : |
Description
Expansin-B4
Coordinates
chr5:-:205579980..205580792
Molecular Weight (calculated)
29161.1 Da
IEP (calculated)
8.453
GRAVY (calculated)
-0.271
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVNVSTMWS LMQAQVAMVV ALSFLVSGAW CGPPKVPPGK NITATYGKDW LDAKATWYGK PTGAGPDDNG GGCGYKDVNK PPFNSMGACG NIPIFKDGLG
101: CGSCFEIKCD KPVECSGKPV VVHITDMNYE PIAAYHFDLA GTAFGAMAKK GEEEKLRKAG IIDMQFRRVK CKYGSKVTFH LEKGCGPNYL ALLVKYVDGD
201: GDIVAVDIKE KGSDTYEPLK HSWGAIWRKD SDKPLKGPLT VRLTTEGGTK TVYDDVIPAN WKANTAYTAK
101: CGSCFEIKCD KPVECSGKPV VVHITDMNYE PIAAYHFDLA GTAFGAMAKK GEEEKLRKAG IIDMQFRRVK CKYGSKVTFH LEKGCGPNYL ALLVKYVDGD
201: GDIVAVDIKE KGSDTYEPLK HSWGAIWRKD SDKPLKGPLT VRLTTEGGTK TVYDDVIPAN WKANTAYTAK
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.