Factsheet for Zm00001d033231_P003

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93754	Sorghum	extracellular	40.2	93.79
TraesCS5D01G384200.1	Wheat	extracellular	30.53	70.78
TraesCS5B01G376500.1	Wheat	extracellular	30.39	70.23
Os03t0645000-00	Rice	mitochondrion	29.55	67.41
Zm00001d026170_P001	Maize	extracellular	23.39	63.74
Zm00001d051368_P001	Maize	extracellular	13.59	61.39
Zm00001d045861_P001	Maize	mitochondrion	21.85	58.87
Zm00001d017493_P001	Maize	extracellular	21.85	58.43
Zm00001d026171_P001	Maize	extracellular	15.83	57.95
Zm00001d045792_P001	Maize	extracellular	21.85	57.78
VIT_15s0021g02670.t01	Wine grape	extracellular	20.73	54.21
Solyc01g090810.2.1	Tomato	extracellular	20.45	53.09
VIT_15s0021g02700.t01	Wine grape	extracellular	20.17	52.75
GSMUA_AchrUn_...	Banana	extracellular	19.33	52.27
HORVU5Hr1G092910.9	Barley	plastid	29.97	51.69
Zm00001d017495_P001	Maize	extracellular	20.87	50.68
GSMUA_Achr4P26910_001	Banana	extracellular	18.91	49.63
PGSC0003DMT400048506	Potato	plastid	13.17	48.45
Zm00001d017494_P001	Maize	extracellular	20.03	48.31
Zm00001d026169_P001	Maize	extracellular	19.75	48.29
KRH75302	Soybean	extracellular	18.63	48.01
KRG88934	Soybean	extracellular, vacuole	18.49	47.65
CDY18948	Canola	extracellular	12.89	47.18
KRH33423	Soybean	extracellular	18.21	46.93
KRH33426	Soybean	extracellular	17.79	46.69
CDY72655	Canola	cytosol, plastid	10.92	46.15
CDY18950	Canola	cytosol, extracellular, plastid	15.27	45.99
Zm00001d019560_P001	Maize	plasma membrane	19.75	45.78
CDX74710	Canola	extracellular	17.51	45.62
Bra004889.1-P	Field mustard	extracellular	17.51	45.45
Zm00001d029903_P002	Maize	extracellular	16.95	45.32
CDY70406	Canola	extracellular	17.37	45.26
Zm00001d029906_P001	Maize	extracellular	16.95	45.15
CDY72345	Canola	cytosol	15.41	45.08
CDY18951	Canola	extracellular	17.23	44.73
Zm00001d047089_P001	Maize	extracellular	16.67	44.57
Zm00001d047090_P002	Maize	extracellular	16.81	44.44
CDY72505	Canola	cytosol	9.8	43.75
Zm00001d029913_P001	Maize	extracellular	16.81	43.48
Bra035987.1-P	Field mustard	extracellular	16.11	43.4
CDY14888	Canola	extracellular	16.11	43.4
Solyc10g018500.1.1	Tomato	extracellular	16.11	43.4
CDX74711	Canola	extracellular	15.83	43.3
AT2G45110.1	Thale cress	extracellular	15.69	43.24
AT1G65680.1	Thale cress	extracellular	16.53	43.22
CDX96901	Canola	extracellular	15.97	43.02
VIT_09s0002g08510.t01	Wine grape	extracellular	16.81	43.01
Bra000370.1-P	Field mustard	extracellular	15.55	42.86
CDX83404	Canola	extracellular	15.55	42.86
KRH65410	Soybean	extracellular	15.97	42.7
AT1G65681.1	Thale cress	cytosol	13.31	42.6
Zm00001d047096_P001	Maize	extracellular	16.81	42.55
Zm00001d027281_P001	Maize	extracellular	16.11	42.12
CDY18946	Canola	extracellular	15.69	42.11
Solyc03g093390.2.1	Tomato	extracellular, nucleus	16.81	42.11
Zm00001d017736_P001	Maize	cytosol	11.34	41.97
Zm00001d017740_P001	Maize	extracellular	14.71	41.5
Zm00001d029907_P001	Maize	extracellular	15.83	41.39
Zm00001d047093_P001	Maize	extracellular	15.27	41.29
Zm00001d047135_P011	Maize	extracellular	15.55	41.26
Zm00001d047146_P001	Maize	extracellular	15.55	41.26
Zm00001d047147_P001	Maize	extracellular	15.55	41.26
Zm00001d017735_P001	Maize	extracellular	14.57	41.11
Zm00001d004586_P001	Maize	extracellular	17.93	40.89
Zm00001d047091_P001	Maize	extracellular	15.55	40.66
Zm00001d047142_P001	Maize	extracellular	15.27	40.52
Solyc01g090820.1.1	Tomato	extracellular	14.57	40.47
Zm00001d019557_P001	Maize	extracellular, plastid	16.25	40.14
Zm00001d040608_P001	Maize	extracellular	14.99	39.93
Zm00001d017737_P001	Maize	extracellular	14.99	39.63
Zm00001d048384_P001	Maize	extracellular	14.85	39.41
Zm00001d040609_P001	Maize	extracellular	14.71	39.03
Zm00001d017732_P001	Maize	extracellular	14.71	38.89
Zm00001d017733_P001	Maize	extracellular	14.71	38.89
CDX95627	Canola	extracellular	15.13	38.71
Zm00001d029899_P001	Maize	extracellular, mitochondrion	15.27	38.65
Zm00001d017731_P001	Maize	extracellular	12.61	38.63
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	7.0	38.46
Zm00001d047087_P001	Maize	extracellular	15.41	38.46
Bra004890.1-P	Field mustard	extracellular	16.81	37.74
Zm00001d027283_P001	Maize	extracellular	16.81	37.74
Solyc07g049540.1.1	Tomato	extracellular	13.45	37.35
Solyc05g052330.1.1	Tomato	extracellular	14.01	37.31
Zm00001d047094_P001	Maize	extracellular	14.43	36.92
Zm00001d017377_P001	Maize	extracellular	13.31	35.45
AT3G60570.1	Thale cress	extracellular	13.03	35.23
Zm00001d017741_P001	Maize	extracellular	7.84	35.22
CDX74713	Canola	extracellular	16.81	34.99
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	6.72	34.78
PGSC0003DMT400095086	Potato	plastid	12.04	34.4
CDY71186	Canola	extracellular	12.89	33.95
Bra003421.1-P	Field mustard	extracellular	12.46	33.46
CDX67835	Canola	extracellular	12.46	33.46
Zm00001d029827_P001	Maize	extracellular	10.5	32.61
Zm00001d002860_P002	Maize	extracellular	13.31	31.15
Bra014484.1-P	Field mustard	extracellular	15.41	30.56
CDY48362	Canola	extracellular	15.13	30.25
PGSC0003DMT400066943	Potato	cytosol, plastid, vacuole	18.21	28.32
Zm00001d027520_P001	Maize	extracellular	10.92	28.06
Zm00001d048344_P002	Maize	extracellular	10.64	27.74
Zm00001d006360_P001	Maize	extracellular	10.36	27.21
Zm00001d029783_P003	Maize	extracellular	10.08	26.18
Zm00001d017734_P001	Maize	cytosol	14.71	22.93
Zm00001d014826_P001	Maize	endoplasmic reticulum, extracellular, vacuole	8.4	18.81

Protein Annotations

EntrezGene:100282108	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	UniProt:A0A1D6KX41	InterPro:Expan_Lol_pI
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576
GO:GO:0008150	GO:GO:0019953	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
InterPro:LolPI	ProteinID:ONM07029.1	ProteinID:ONM07030.1	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829
PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF14	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000842B9D7
EnsemblPlantsGene:Zm00001d033231	EnsemblPlants:Zm00001d033231_P003	EnsemblPlants:Zm00001d033231_T003	SEG:seg	:	:

Description

Expansin-B4

Coordinates

chr1:+:255266249..255275500

Molecular Weight (calculated)

75474.3 Da

IEP (calculated)

5.711

GRAVY (calculated)

0.036

Length

714 amino acids

Sequence
(BLAST)

001: MSFKIQLLSS IAIFAFALHL HPCVSTEFRR ELSSWTTGIA TWYGDANGAG SEGGACGYQY AVDQPPFSSL IAAGSPFIYD SGNGCGSCYQ VVCSSNQACS
101: GYPVTVVITD QGPGGGPCLS QASDGMCMNE GAHFDMSGTA FGAMAKPGMA DQLRAAGLLQ IQYTRVQCEW PGVDVTFSVD SGSNPNYLAV LIEYEDCESD
201: LSAVDIMQSS AGQWVPMQHS WGAIWRLDSG SALQGPFHLR LTFSSGRVLI ASNAIPAGWN AGVAYRAGGV AVTRARPRSG GSQAGEAAAG TFRGLVYHLL
301: MFVQTANQVI SEFPQQRASI NPAIPASFSP ISGARIPLRL HAPRQFHDAS PLTSVLTQHP GGWNPQRKTD SQSTVLPKSS SISFMKIQVR IKSIKVSIFL
401: PPETLAKVCC MASTLQLLFS IAITALAFFL HPCASTDEFH RELYGWSNGI ATWYGAADGA GTDGGACGYQ NAVDQPPFSS MIAAGCSSIY DSGKGCGSCY
501: QAVCTGNDAC SGNPVTVVIT DECPDCPCPD EQVHFDMSGT AFGALAKPGQ ESQLRGAGAI QIQYTRVQCE WPGVDVTFSV EPGSNPNYLA VLIEYEDSDS
601: DLDSVDMMQT QGGTTGQWVP MQQSWGAVWK INSGSVLQGP FNIRLTFSSG RALVASNAIP AGWNAGVAYR SGGVAVTRAR PRSGACRGYE AAGTLDGLVH
701: RHLVVLLLLV LLTL

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.