Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75302 | Soybean | extracellular | 64.73 | 64.26 |
| HORVU2Hr1G013380.1 | Barley | cytosol, extracellular, mitochondrion | 54.91 | 63.71 |
| Os04t0552000-00 | Rice | extracellular | 61.09 | 63.64 |
| KRG88934 | Soybean | extracellular, vacuole | 63.27 | 62.82 |
| TraesCS2D01G411000.1 | Wheat | extracellular | 59.64 | 62.6 |
| TraesCS2A01G413600.1 | Wheat | extracellular | 59.64 | 62.6 |
| Os05t0246300-01 | Rice | extracellular | 60.0 | 62.5 |
| TraesCS2B01G432300.1 | Wheat | plastid | 59.27 | 62.21 |
| Zm00001d026170_P001 | Maize | extracellular | 58.55 | 61.45 |
| KRH33423 | Soybean | extracellular | 61.82 | 61.37 |
| Zm00001d017493_P001 | Maize | extracellular | 59.27 | 61.05 |
| TraesCS2B01G607400.1 | Wheat | extracellular | 55.27 | 61.04 |
| EES11234 | Sorghum | extracellular | 58.18 | 60.84 |
| KRH33426 | Soybean | extracellular | 60.0 | 60.66 |
| TraesCS2D01G592900.1 | Wheat | extracellular | 54.91 | 60.64 |
| TraesCS2B01G095600.1 | Wheat | extracellular | 56.0 | 60.39 |
| EES07509 | Sorghum | extracellular | 57.82 | 60.23 |
| TraesCS2A01G580200.1 | Wheat | extracellular | 54.91 | 60.16 |
| TraesCS2A01G081200.1 | Wheat | extracellular | 55.27 | 59.84 |
| TraesCS2A01G580300.1 | Wheat | extracellular | 54.18 | 59.84 |
| HORVU2Hr1G013360.1 | Barley | extracellular | 54.55 | 59.76 |
| TraesCS2D01G078900.1 | Wheat | extracellular | 54.91 | 59.45 |
| TraesCS2A01G080800.1 | Wheat | extracellular | 54.55 | 59.06 |
| Zm00001d051368_P001 | Maize | extracellular | 33.82 | 58.86 |
| HORVU2Hr1G097480.1 | Barley | extracellular | 60.0 | 58.3 |
| EER88254 | Sorghum | extracellular | 54.91 | 58.3 |
| KXG19818 | Sorghum | extracellular | 54.91 | 58.3 |
| TraesCS6A01G249700.1 | Wheat | extracellular | 56.36 | 58.27 |
| Zm00001d045861_P001 | Maize | mitochondrion | 56.0 | 58.11 |
| TraesCS6D01G231400.1 | Wheat | extracellular | 56.0 | 57.89 |
| HORVU0Hr1G016380.2 | Barley | extracellular | 55.64 | 57.74 |
| TraesCS2B01G095700.1 | Wheat | extracellular | 52.73 | 57.54 |
| Os02t0658600-00 | Rice | plastid | 57.09 | 57.51 |
| TraesCS2D01G078800.1 | Wheat | extracellular | 53.09 | 57.48 |
| TraesCS2D01G104800.1 | Wheat | extracellular | 53.09 | 57.48 |
| TraesCS6A01G249400.2 | Wheat | extracellular | 55.27 | 57.36 |
| Zm00001d045792_P001 | Maize | extracellular | 56.0 | 57.04 |
| TraesCS2B01G122100.1 | Wheat | extracellular | 39.27 | 56.54 |
| TraesCSU01G009600.1 | Wheat | extracellular | 52.0 | 56.52 |
| Solyc03g093390.2.1 | Tomato | extracellular, nucleus | 58.55 | 56.49 |
| GSMUA_Achr2P13730_001 | Banana | extracellular | 53.82 | 56.49 |
| GSMUA_Achr2P13740_001 | Banana | extracellular | 53.45 | 56.11 |
| TraesCS2A01G105200.1 | Wheat | extracellular | 51.27 | 55.51 |
| KRH65410 | Soybean | extracellular | 53.09 | 54.68 |
| TraesCS2D01G078600.1 | Wheat | extracellular | 47.27 | 54.39 |
| GSMUA_Achr2P13750_001 | Banana | extracellular | 50.18 | 52.87 |
| GSMUA_AchrUn_... | Banana | extracellular | 33.45 | 51.11 |
| Solyc10g018500.1.1 | Tomato | extracellular | 49.09 | 50.94 |
| TraesCS5D01G384200.1 | Wheat | extracellular | 55.64 | 49.68 |
| TraesCS5B01G376500.1 | Wheat | extracellular | 55.64 | 49.51 |
| Solyc01g090820.1.1 | Tomato | extracellular | 46.18 | 49.42 |
| EER93754 | Sorghum | extracellular | 53.45 | 48.04 |
| Os03t0645000-00 | Rice | mitochondrion | 54.55 | 47.92 |
| HORVU2Hr1G013340.1 | Barley | extracellular | 49.82 | 46.92 |
| PGSC0003DMT400066943 | Potato | cytosol, plastid, vacuole | 75.64 | 45.32 |
| KXG37946 | Sorghum | extracellular | 52.73 | 44.62 |
| Solyc07g054170.2.1 | Tomato | extracellular | 43.27 | 44.57 |
| Solyc07g049540.1.1 | Tomato | extracellular | 40.36 | 43.19 |
| Solyc10g008440.2.1 | Tomato | extracellular | 41.09 | 43.13 |
| Solyc05g052330.1.1 | Tomato | extracellular | 41.09 | 42.16 |
| HORVU5Hr1G092910.9 | Barley | plastid | 54.91 | 36.47 |
| Solyc08g077910.2.1 | Tomato | extracellular | 28.36 | 31.08 |
| Solyc06g060970.1.1 | Tomato | extracellular | 26.91 | 29.84 |
| Solyc08g077330.2.1 | Tomato | extracellular | 27.27 | 29.41 |
| Solyc08g077900.2.1 | Tomato | extracellular | 26.91 | 29.25 |
| Solyc01g112000.2.1 | Tomato | extracellular | 26.18 | 27.59 |
| Zm00001d033231_P003 | Maize | extracellular | 53.09 | 20.45 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0019953 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 |
| UniProt:K4AZ22 | InterPro:LolPI | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 |
| PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF3 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf |
| SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | EnsemblPlantsGene:Solyc01g090810.2 | EnsemblPlants:Solyc01g090810.2.1 | TMHMM:TMhelix |
| UniParc:UPI0002767E1C | SEG:seg | : | : | : | : |
Description
Putative expansin-B2 [Source:Projected from Arabidopsis thaliana (AT1G65680) UniProtKB/Swiss-Prot;Acc:Q9SHY6]
Coordinates
chr1:+:84521192..84523174
Molecular Weight (calculated)
29039.1 Da
IEP (calculated)
7.191
GRAVY (calculated)
-0.085
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTTFMALNP FIVFTYFTTF SLLTISCSCF HPKRFNVSKV QSNSDWSPAG ATWYGSPSGA GSDGGACGYT NAVDQPPFSS LIAAAGPSLF KSGKGCGACY
101: QVKCTGNKAC SGKPVRVVIT DSCPGGPCLS ESAHFDLSGT SFGAMAISGQ ADQLRNAGVI QIQYKRVECN YPGVKLTFHV DSGSNSNYFA ALVEYEDGDG
201: DLNSVDLKQA LDSESWQPMQ QSWGAVWKLD SGSSLVAPFS LKLTGESGQT VVANGVIPAG WQPGKTYRSV VNFKV
101: QVKCTGNKAC SGKPVRVVIT DSCPGGPCLS ESAHFDLSGT SFGAMAISGQ ADQLRNAGVI QIQYKRVECN YPGVKLTFHV DSGSNSNYFA ALVEYEDGDG
201: DLNSVDLKQA LDSESWQPMQ QSWGAVWKLD SGSSLVAPFS LKLTGESGQT VVANGVIPAG WQPGKTYRSV VNFKV
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.