Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400095086 | Potato | plastid | 76.26 | 78.4 |
| Solyc05g052330.1.1 | Tomato | extracellular | 58.75 | 56.34 |
| HORVU2Hr1G013380.1 | Barley | cytosol, extracellular, mitochondrion | 44.36 | 48.1 |
| Solyc01g090820.1.1 | Tomato | extracellular | 47.47 | 47.47 |
| GSMUA_Achr2P13750_001 | Banana | extracellular | 47.47 | 46.74 |
| CDY72345 | Canola | cytosol | 44.36 | 46.72 |
| Solyc10g018500.1.1 | Tomato | extracellular | 47.47 | 46.04 |
| CDY18950 | Canola | cytosol, extracellular, plastid | 42.41 | 45.99 |
| TraesCS2B01G095600.1 | Wheat | extracellular | 45.53 | 45.88 |
| TraesCSU01G009600.1 | Wheat | extracellular | 45.14 | 45.85 |
| TraesCS2D01G078800.1 | Wheat | extracellular | 45.14 | 45.67 |
| TraesCS2D01G078900.1 | Wheat | extracellular | 45.14 | 45.67 |
| GSMUA_Achr2P13740_001 | Banana | extracellular | 46.3 | 45.42 |
| TraesCS2B01G095700.1 | Wheat | extracellular | 44.36 | 45.24 |
| TraesCS2A01G081200.1 | Wheat | extracellular | 44.36 | 44.88 |
| TraesCS2A01G080800.1 | Wheat | extracellular | 43.97 | 44.49 |
| AT2G45110.1 | Thale cress | extracellular | 44.75 | 44.4 |
| AT1G65681.1 | Thale cress | cytosol | 38.52 | 44.39 |
| EES07509 | Sorghum | extracellular | 45.53 | 44.32 |
| GSMUA_Achr2P13730_001 | Banana | extracellular | 45.14 | 44.27 |
| HORVU2Hr1G013360.1 | Barley | extracellular | 43.19 | 44.22 |
| CDX74711 | Canola | extracellular | 44.75 | 44.06 |
| Zm00001d017493_P001 | Maize | extracellular | 45.53 | 43.82 |
| TraesCS2B01G607400.1 | Wheat | extracellular | 42.41 | 43.78 |
| Os04t0552000-00 | Rice | extracellular | 44.75 | 43.56 |
| TraesCS2D01G592900.1 | Wheat | extracellular | 42.02 | 43.37 |
| Zm00001d026170_P001 | Maize | extracellular | 43.97 | 43.13 |
| TraesCS2A01G580200.1 | Wheat | extracellular | 42.02 | 43.03 |
| Zm00001d045861_P001 | Maize | mitochondrion | 44.36 | 43.02 |
| TraesCS2A01G580300.1 | Wheat | extracellular | 41.63 | 42.97 |
| EES11234 | Sorghum | extracellular | 43.97 | 42.97 |
| KXG19818 | Sorghum | extracellular | 43.19 | 42.86 |
| TraesCS6A01G249700.1 | Wheat | extracellular | 44.36 | 42.86 |
| HORVU0Hr1G016380.2 | Barley | extracellular | 43.97 | 42.64 |
| TraesCS6D01G231400.1 | Wheat | extracellular | 43.97 | 42.48 |
| EER88254 | Sorghum | extracellular | 42.8 | 42.47 |
| TraesCS2B01G122100.1 | Wheat | extracellular | 31.52 | 42.41 |
| Zm00001d051368_P001 | Maize | extracellular | 26.07 | 42.41 |
| TraesCS6A01G249400.2 | Wheat | extracellular | 43.58 | 42.26 |
| Zm00001d045792_P001 | Maize | extracellular | 44.36 | 42.22 |
| CDY18946 | Canola | extracellular | 43.58 | 42.11 |
| Os05t0246300-01 | Rice | extracellular | 42.8 | 41.67 |
| TraesCS2D01G411000.1 | Wheat | extracellular | 42.41 | 41.6 |
| CDY72655 | Canola | cytosol, plastid | 27.24 | 41.42 |
| TraesCS2D01G104800.1 | Wheat | extracellular | 40.86 | 41.34 |
| CDY72505 | Canola | cytosol | 25.68 | 41.25 |
| TraesCS2A01G413600.1 | Wheat | extracellular | 42.02 | 41.22 |
| Os02t0658600-00 | Rice | plastid | 43.58 | 41.03 |
| TraesCS2D01G078600.1 | Wheat | extracellular | 38.13 | 41.0 |
| TraesCS2A01G105200.1 | Wheat | extracellular | 40.47 | 40.94 |
| TraesCS2B01G432300.1 | Wheat | plastid | 41.63 | 40.84 |
| Bra000370.1-P | Field mustard | extracellular | 40.86 | 40.54 |
| CDX83404 | Canola | extracellular | 40.86 | 40.54 |
| Solyc01g090810.2.1 | Tomato | extracellular | 43.19 | 40.36 |
| CDX96901 | Canola | extracellular | 40.08 | 38.87 |
| HORVU2Hr1G097480.1 | Barley | extracellular | 42.41 | 38.52 |
| Bra035987.1-P | Field mustard | extracellular | 39.69 | 38.49 |
| CDY14888 | Canola | extracellular | 39.69 | 38.49 |
| Bra004891.1-P | Field mustard | cytosol, nucleus, plastid | 20.23 | 37.68 |
| GSMUA_AchrUn_... | Banana | extracellular | 26.07 | 37.22 |
| Solyc03g093390.2.1 | Tomato | extracellular, nucleus | 40.86 | 36.84 |
| CDX95627 | Canola | extracellular | 38.91 | 35.84 |
| HORVU2Hr1G013340.1 | Barley | extracellular | 40.08 | 35.27 |
| CDY71186 | Canola | extracellular | 36.19 | 34.32 |
| Bra003421.1-P | Field mustard | extracellular | 35.41 | 34.21 |
| CDX67835 | Canola | extracellular | 35.41 | 34.21 |
| AT3G60570.1 | Thale cress | extracellular | 35.02 | 34.09 |
| Solyc07g054170.2.1 | Tomato | extracellular | 35.41 | 34.08 |
| TraesCS5D01G384200.1 | Wheat | extracellular | 40.08 | 33.44 |
| Solyc10g008440.2.1 | Tomato | extracellular | 33.85 | 33.21 |
| TraesCS5B01G376500.1 | Wheat | extracellular | 39.69 | 33.01 |
| KXG37946 | Sorghum | extracellular | 40.08 | 31.69 |
| EER93754 | Sorghum | extracellular | 37.35 | 31.37 |
| Os03t0645000-00 | Rice | mitochondrion | 38.13 | 31.31 |
| Solyc08g077910.2.1 | Tomato | extracellular | 29.18 | 29.88 |
| Solyc06g060970.1.1 | Tomato | extracellular | 26.07 | 27.02 |
| CDY48362 | Canola | extracellular | 35.41 | 25.49 |
| Solyc08g077330.2.1 | Tomato | extracellular | 25.29 | 25.49 |
| Solyc08g077900.2.1 | Tomato | extracellular | 24.9 | 25.3 |
| Bra014484.1-P | Field mustard | extracellular | 35.02 | 25.0 |
| HORVU5Hr1G092910.9 | Barley | plastid | 40.08 | 24.88 |
| Solyc01g112000.2.1 | Tomato | extracellular | 24.12 | 23.75 |
| Zm00001d033231_P003 | Maize | extracellular | 37.35 | 13.45 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | UniProt:K4CF56 | InterPro:LolPI |
| PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 |
| PANTHER:PTHR31692 | PANTHER:PTHR31692:SF3 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 |
| SUPFAM:SSF50685 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc07g049540.1 | EnsemblPlants:Solyc07g049540.1.1 | TMHMM:TMhelix | UniParc:UPI000276B253 |
Description
No Description!
Coordinates
chr7:-:59837327..59839096
Molecular Weight (calculated)
27709.7 Da
IEP (calculated)
6.229
GRAVY (calculated)
-0.118
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MAANLSLWII TIFFCSYLVT FSSCQPSGFS LAVATFYTDA GSGGACGLEN DVANSPYNSM ITAGNQALFK QGVGCGACYQ VFCNEAQNPH CSGNPITVTL
101: TDECPGSCND DPVHFDFSGI AFAKLAKPGE QAELHKAGRI PIYYKRVACN YNRNILFKVD KGSNPNFFAV VSEAVDGDGD LSLVEIQTGG KKNTWNSMNR
201: MIGSTWSVGI DPNTQKPPFS LRLTSGTKQS VTALNVIPDG WQPTQFYNSN VNFPCKL
101: TDECPGSCND DPVHFDFSGI AFAKLAKPGE QAELHKAGRI PIYYKRVACN YNRNILFKVD KGSNPNFFAV VSEAVDGDGD LSLVEIQTGG KKNTWNSMNR
201: MIGSTWSVGI DPNTQKPPFS LRLTSGTKQS VTALNVIPDG WQPTQFYNSN VNFPCKL
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.