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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 5
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14888 Canola extracellular 100.0 100.0
CDY72655 Canola cytosol, plastid 62.26 97.63
CDY72505 Canola cytosol 58.49 96.88
Bra000370.1-P Field mustard extracellular 76.23 77.99
AT2G45110.1 Thale cress extracellular 75.85 77.61
AT1G65681.1 Thale cress cytosol 61.89 73.54
Bra004891.1-P Field mustard cytosol, nucleus, plastid 30.94 59.42
HORVU2Hr1G013380.1 Barley cytosol, extracellular, mitochondrion 49.81 55.7
TraesCS2D01G078900.1 Wheat extracellular 53.21 55.51
TraesCS2B01G095600.1 Wheat extracellular 53.21 55.29
TraesCS2A01G081200.1 Wheat extracellular 52.83 55.12
TraesCS2D01G592900.1 Wheat extracellular 51.32 54.62
TraesCS2B01G607400.1 Wheat extracellular 50.94 54.22
HORVU2Hr1G013360.1 Barley extracellular 51.32 54.18
TraesCSU01G009600.1 Wheat extracellular 51.7 54.15
TraesCS2A01G580300.1 Wheat extracellular 50.57 53.82
TraesCS2A01G080800.1 Wheat extracellular 51.32 53.54
TraesCS2D01G078800.1 Wheat extracellular 50.94 53.15
TraesCS2D01G104800.1 Wheat extracellular 50.94 53.15
TraesCS2D01G078600.1 Wheat extracellular 47.92 53.14
TraesCS2A01G580200.1 Wheat extracellular 50.19 52.99
TraesCS2A01G105200.1 Wheat extracellular 50.57 52.76
Bra003421.1-P Field mustard extracellular 51.7 51.5
Zm00001d051368_P001 Maize extracellular 30.57 51.27
TraesCS2B01G095700.1 Wheat extracellular 48.3 50.79
TraesCS2B01G122100.1 Wheat extracellular 36.6 50.79
TraesCS2A01G413600.1 Wheat extracellular 50.19 50.76
TraesCS2B01G432300.1 Wheat plastid 50.19 50.76
Os04t0552000-00 Rice extracellular 50.57 50.76
Zm00001d017493_P001 Maize extracellular 50.57 50.19
TraesCS2D01G411000.1 Wheat extracellular 49.43 50.0
EES07509 Sorghum extracellular 49.43 49.62
Zm00001d045861_P001 Maize mitochondrion 49.06 49.06
EES11234 Sorghum extracellular 48.68 49.05
Os05t0246300-01 Rice extracellular 48.68 48.86
Zm00001d026170_P001 Maize extracellular 48.3 48.85
TraesCS6A01G249400.2 Wheat extracellular 48.68 48.68
HORVU0Hr1G016380.2 Barley extracellular 48.68 48.68
KXG19818 Sorghum extracellular 47.55 48.65
TraesCS6A01G249700.1 Wheat extracellular 48.68 48.5
GSMUA_Achr2P13740_001 Banana extracellular 47.92 48.47
GSMUA_Achr2P13730_001 Banana extracellular 47.92 48.47
Os02t0658600-00 Rice plastid 49.81 48.35
EER88254 Sorghum extracellular 47.17 48.26
Zm00001d045792_P001 Maize extracellular 49.06 48.15
GSMUA_Achr2P13750_001 Banana extracellular 47.17 47.89
TraesCS6D01G231400.1 Wheat extracellular 47.92 47.74
Solyc10g018500.1.1 Tomato extracellular 46.79 46.79
HORVU2Hr1G097480.1 Barley extracellular 49.81 46.64
Bra004889.1-P Field mustard extracellular 45.28 43.64
Solyc01g090820.1.1 Tomato extracellular 42.26 43.58
HORVU2Hr1G013340.1 Barley extracellular 47.55 43.15
GSMUA_AchrUn_... Banana extracellular 29.06 42.78
PGSC0003DMT400030395 Potato cytosol, extracellular, mitochondrion, nucleus 20.75 42.31
Solyc05g052330.1.1 Tomato extracellular 42.26 41.79
Solyc07g049540.1.1 Tomato extracellular 38.49 39.69
TraesCS5B01G376500.1 Wheat extracellular 45.66 39.16
TraesCS5D01G384200.1 Wheat extracellular 45.28 38.96
EER93754 Sorghum extracellular 44.15 38.24
Bra026272.1-P Field mustard extracellular 38.11 38.11
Bra014484.1-P Field mustard extracellular 51.32 37.78
Bra024215.1-P Field mustard extracellular 37.74 37.74
Os03t0645000-00 Rice mitochondrion 44.53 37.7
PGSC0003DMT400095086 Potato plastid 35.47 37.6
KXG37946 Sorghum extracellular 46.04 37.54
Bra004890.1-P Field mustard extracellular 43.02 35.85
Bra036499.1-P Field mustard extracellular 35.47 35.47
Bra012684.1-P Field mustard extracellular 28.3 30.0
Bra012687.1-P Field mustard extracellular 27.92 29.6
HORVU5Hr1G092910.9 Barley plastid 45.28 28.99
Bra040107.1-P Field mustard extracellular 27.17 28.8
Bra033563.1-P Field mustard extracellular 25.66 25.76
Bra011899.1-P Field mustard extracellular 26.04 25.65
Zm00001d033231_P003 Maize extracellular 43.4 16.11
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1EnsemblPlantsGene:Bra035987EnsemblPlants:Bra035987.1EnsemblPlants:Bra035987.1-P
InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sfGO:GO:0000003GO:GO:0005575
GO:GO:0005576GO:GO:0008150GO:GO:0019953InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749
InterPro:IPR036908InterPro:LolPIUniProt:M4F4I7PFAM:PF01357PFAM:PF03330PRINTS:PR00829
PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF3InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF49590SUPFAM:SSF50685SignalP:SignalP-noTMUniParc:UPI000253E65C
SEG:seg:::::
Description
AT2G45110 (E=4e-104) ATEXPB4, EXPB4, ATHEXP BETA 1.1 | ATEXPB4 (ARABIDOPSIS THALIANA EXPANSIN B4)
Coordinates
chrScaffold000111:-:290653..291849
Molecular Weight (calculated)
28170.3 Da
IEP (calculated)
6.099
GRAVY (calculated)
0.040
Length
265 amino acids
Sequence
(BLAST)
001: MASPSHRYFA ILALFAVSLK FSYSQNVTIE DNGWGYAGVT WYGEAGGAGS TGGACGYGFA VANPPFYGMV SAGGPSLFNN GKGCGTCYQV VCLENPACSM
101: RPIRVTITDE CPGGPCASEP AHFDLSGKAI GALARHGQAD QLRAAGVLRV VYRRVPCSYR ESSYSWSTIA LHIDAGANPY YIAFVVEYEN GDGDLASVEI
201: QPAGGSFIPM QEMRSAVWKL NSGSALIGPF NIRLTSGETG NVIVAQTVIP VNWRADETYR SIVNF
Best Arabidopsis Sequence Match ( AT2G45110.1 )
(BLAST)
001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF
Arabidopsis Description
EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.