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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 10
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX83404 Canola extracellular 100.0 100.0
CDX95627 Canola extracellular 90.35 83.87
AT2G45110.1 Thale cress extracellular 80.69 80.69
Bra035987.1-P Field mustard extracellular 77.99 76.23
AT1G65681.1 Thale cress cytosol 62.55 72.65
Bra004891.1-P Field mustard cytosol, nucleus, plastid 35.91 67.39
TraesCSU01G009600.1 Wheat extracellular 54.83 56.13
TraesCS2D01G078800.1 Wheat extracellular 53.67 54.72
TraesCS2D01G592900.1 Wheat extracellular 52.51 54.62
TraesCS2B01G607400.1 Wheat extracellular 52.51 54.62
HORVU2Hr1G013360.1 Barley extracellular 52.51 54.18
TraesCS2B01G095600.1 Wheat extracellular 53.28 54.12
TraesCS2A01G081200.1 Wheat extracellular 52.9 53.94
TraesCS2A01G580300.1 Wheat extracellular 51.74 53.82
HORVU2Hr1G013380.1 Barley cytosol, extracellular, mitochondrion 49.03 53.59
TraesCS2D01G078900.1 Wheat extracellular 52.51 53.54
TraesCS2A01G580200.1 Wheat extracellular 51.74 53.39
TraesCS2B01G095700.1 Wheat extracellular 51.74 53.17
TraesCS2A01G105200.1 Wheat extracellular 52.12 53.15
TraesCS2D01G104800.1 Wheat extracellular 52.12 53.15
TraesCS2A01G080800.1 Wheat extracellular 50.58 51.57
HORVU0Hr1G016380.2 Barley extracellular 52.51 51.32
Zm00001d051368_P001 Maize extracellular 31.27 51.27
TraesCS2B01G122100.1 Wheat extracellular 37.45 50.79
EES07509 Sorghum extracellular 51.74 50.76
TraesCS2D01G078600.1 Wheat extracellular 46.72 50.63
TraesCS2B01G432300.1 Wheat plastid 50.97 50.38
TraesCS2A01G413600.1 Wheat extracellular 50.97 50.38
Bra003421.1-P Field mustard extracellular 51.74 50.38
Zm00001d017493_P001 Maize extracellular 51.74 50.19
Os04t0552000-00 Rice extracellular 50.97 50.0
TraesCS2D01G411000.1 Wheat extracellular 50.19 49.62
GSMUA_Achr2P13750_001 Banana extracellular 49.81 49.43
TraesCS6A01G249700.1 Wheat extracellular 50.58 49.25
Zm00001d045861_P001 Maize mitochondrion 50.19 49.06
EES11234 Sorghum extracellular 49.81 49.05
KXG19818 Sorghum extracellular 49.03 49.03
GSMUA_Achr2P13740_001 Banana extracellular 49.42 48.85
GSMUA_Achr2P13730_001 Banana extracellular 49.42 48.85
TraesCS6A01G249400.2 Wheat extracellular 49.81 48.68
EER88254 Sorghum extracellular 48.65 48.65
TraesCS6D01G231400.1 Wheat extracellular 49.81 48.5
Zm00001d026170_P001 Maize extracellular 49.03 48.47
Zm00001d045792_P001 Maize extracellular 50.19 48.15
Os05t0246300-01 Rice extracellular 48.26 47.35
Os02t0658600-00 Rice plastid 49.42 46.89
Solyc10g018500.1.1 Tomato extracellular 47.49 46.42
HORVU2Hr1G097480.1 Barley extracellular 50.58 46.29
Solyc01g090820.1.1 Tomato extracellular 45.56 45.91
HORVU2Hr1G013340.1 Barley extracellular 50.19 44.52
Bra004889.1-P Field mustard extracellular 45.95 43.27
GSMUA_AchrUn_... Banana extracellular 29.73 42.78
Bra026272.1-P Field mustard extracellular 42.86 41.89
PGSC0003DMT400030395 Potato cytosol, extracellular, mitochondrion, nucleus 20.85 41.54
Solyc05g052330.1.1 Tomato extracellular 42.47 41.04
Solyc07g049540.1.1 Tomato extracellular 40.54 40.86
Bra024215.1-P Field mustard extracellular 40.15 39.25
Bra036499.1-P Field mustard extracellular 40.15 39.25
PGSC0003DMT400095086 Potato plastid 37.84 39.2
TraesCS5B01G376500.1 Wheat extracellular 45.95 38.51
TraesCS5D01G384200.1 Wheat extracellular 45.56 38.31
KXG37946 Sorghum extracellular 47.1 37.54
Bra004890.1-P Field mustard extracellular 45.56 37.11
EER93754 Sorghum extracellular 43.63 36.93
Os03t0645000-00 Rice mitochondrion 43.63 36.1
Bra014484.1-P Field mustard extracellular 48.65 35.0
Bra012684.1-P Field mustard extracellular 28.57 29.6
Bra012687.1-P Field mustard extracellular 28.19 29.2
Bra040107.1-P Field mustard extracellular 28.19 29.2
HORVU5Hr1G092910.9 Barley plastid 45.56 28.5
Bra033563.1-P Field mustard extracellular 25.48 25.0
Bra011899.1-P Field mustard extracellular 25.1 24.16
Zm00001d033231_P003 Maize extracellular 42.86 15.55
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1EnsemblPlantsGene:Bra000370EnsemblPlants:Bra000370.1EnsemblPlants:Bra000370.1-P
InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sfGO:GO:0000003GO:GO:0005575
GO:GO:0005576GO:GO:0008150GO:GO:0019953InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749
InterPro:IPR036908InterPro:LolPIUniProt:M4C842PFAM:PF01357PFAM:PF03330PRINTS:PR00829
PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF3InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF49590SUPFAM:SSF50685SignalP:SignalP-noTMUniParc:UPI000253FE33
SEG:seg:::::
Description
AT2G45110 (E=8e-114) ATEXPB4, EXPB4, ATHEXP BETA 1.1 | ATEXPB4 (ARABIDOPSIS THALIANA EXPANSIN B4)
Coordinates
chrA03:+:10779423..10782460
Molecular Weight (calculated)
27048.3 Da
IEP (calculated)
7.828
GRAVY (calculated)
0.134
Length
259 amino acids
Sequence
(BLAST)
001: MASSSHIYIA LLALFAVSLK CCYCQNETLA AGWGNAGVTW YGEPEGAGST GGACGYGMVV ANPPLYAMVS AGGPSLFNNG QGCGTCYQIV CTGTAACSGR
101: PITVTITDEC PGGPCASEPF HFDLSGKAIG ALAKPGQAGS LRAAGVLRVS YRRAPCLYRG TNIAFHVDAG ATPFYMAFVV EYENGDGDLA SVEIQPAGGG
201: FIAMQEMRSA LWKVNSGSAL RGPFNIRLTS RESRKVVVAQ GVIPANWRAD QTYRSIINF
Best Arabidopsis Sequence Match ( AT2G45110.1 )
(BLAST)
001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF
Arabidopsis Description
EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.