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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 9
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d051368_P001 Maize extracellular 54.17 90.51
Zm00001d017493_P001 Maize extracellular 90.53 89.51
TraesCS6A01G249700.1 Wheat extracellular 77.27 76.69
TraesCS6D01G231400.1 Wheat extracellular 76.14 75.56
HORVU0Hr1G016380.2 Barley extracellular 75.38 75.09
TraesCS6A01G249400.2 Wheat extracellular 75.0 74.72
EER88254 Sorghum extracellular 71.97 73.36
KXG19818 Sorghum extracellular 71.97 73.36
EES11234 Sorghum extracellular 69.32 69.58
Os02t0658600-00 Rice plastid 71.21 68.86
HORVU2Hr1G013380.1 Barley cytosol, extracellular, mitochondrion 60.98 67.93
TraesCS2B01G607400.1 Wheat extracellular 64.02 67.87
TraesCSU01G009600.1 Wheat extracellular 64.77 67.59
TraesCS2A01G081200.1 Wheat extracellular 64.39 66.93
TraesCS2D01G078900.1 Wheat extracellular 64.39 66.93
TraesCS2B01G095600.1 Wheat extracellular 64.39 66.67
TraesCS2D01G592900.1 Wheat extracellular 62.88 66.67
HORVU2Hr1G013360.1 Barley extracellular 63.26 66.53
TraesCS2A01G580200.1 Wheat extracellular 62.5 65.74
TraesCS2D01G078800.1 Wheat extracellular 62.88 65.35
TraesCS2A01G580300.1 Wheat extracellular 61.36 65.06
TraesCS2A01G080800.1 Wheat extracellular 62.12 64.57
TraesCS2B01G095700.1 Wheat extracellular 61.36 64.29
TraesCS2D01G104800.1 Wheat extracellular 60.23 62.6
TraesCS2A01G105200.1 Wheat extracellular 59.47 61.81
TraesCS2B01G122100.1 Wheat extracellular 44.7 61.78
TraesCS2D01G078600.1 Wheat extracellular 55.68 61.51
GSMUA_AchrUn_... Banana extracellular 58.33 58.33
VIT_15s0021g02670.t01 Wine grape extracellular 59.85 57.88
Solyc01g090810.2.1 Tomato extracellular 60.23 57.82
VIT_15s0021g02700.t01 Wine grape extracellular 58.33 56.41
CDY18950 Canola cytosol, extracellular, plastid 50.38 56.12
EES11235 Sorghum extracellular 61.74 56.01
EES11233 Sorghum extracellular 60.61 55.56
CDY18948 Canola extracellular 40.91 55.38
EES05780 Sorghum extracellular 61.74 55.25
CDY72345 Canola cytosol 50.76 54.92
EES07508 Sorghum extracellular 60.98 54.76
GSMUA_Achr4P26910_001 Banana extracellular 56.06 54.41
PGSC0003DMT400048506 Potato plastid 39.77 54.12
AT1G65680.1 Thale cress extracellular 55.3 53.48
HORVU2Hr1G013340.1 Barley extracellular 59.09 53.42
KRH33426 Soybean extracellular 54.92 53.31
CDX74711 Canola extracellular 52.65 53.26
CDY18951 Canola extracellular 55.3 53.09
AT2G45110.1 Thale cress extracellular 51.52 52.51
AT1G65681.1 Thale cress cytosol 44.32 52.47
KRG88934 Soybean extracellular, vacuole 54.92 52.35
KRH33423 Soybean extracellular 54.92 52.35
KRH75302 Soybean extracellular 54.92 52.35
CDY72655 Canola cytosol, plastid 33.33 52.07
CDY18946 Canola extracellular 52.27 51.88
CDY72505 Canola cytosol 31.44 51.88
CDX74710 Canola extracellular 53.79 51.82
CDY70406 Canola extracellular 53.79 51.82
Bra000370.1-P Field mustard extracellular 50.76 51.74
CDX83404 Canola extracellular 50.76 51.74
Bra004889.1-P Field mustard extracellular 53.79 51.64
EER93754 Sorghum extracellular 59.47 51.31
KXG37946 Sorghum extracellular 61.74 50.15
VIT_09s0002g08510.t01 Wine grape extracellular 52.65 49.82
KRH65410 Soybean extracellular 50.38 49.81
EER91942 Sorghum extracellular 50.0 49.62
Bra035987.1-P Field mustard extracellular 49.62 49.43
CDY14888 Canola extracellular 49.62 49.43
CDX96901 Canola extracellular 49.24 49.06
Solyc01g090820.1.1 Tomato extracellular 47.35 48.64
Solyc10g018500.1.1 Tomato extracellular 48.48 48.3
Solyc03g093390.2.1 Tomato extracellular, nucleus 50.0 46.32
EER98447 Sorghum extracellular 53.03 45.6
Solyc07g049540.1.1 Tomato extracellular 44.32 45.53
PGSC0003DMT400030395 Potato cytosol, extracellular, mitochondrion, nucleus 22.35 45.38
EER98449 Sorghum extracellular 53.41 45.19
CDX95627 Canola extracellular 47.73 45.16
EER91947 Sorghum extracellular 45.83 44.98
Solyc05g052330.1.1 Tomato extracellular 44.7 44.03
KXG38969 Sorghum extracellular 44.32 43.98
EER91945 Sorghum extracellular 45.83 43.84
EER91949 Sorghum extracellular 46.59 43.62
EER94506 Sorghum extracellular 46.59 43.62
AT3G60570.1 Thale cress extracellular 43.56 43.56
Bra004890.1-P Field mustard extracellular 52.27 43.4
EER94537 Sorghum extracellular 43.56 43.23
KXG38972 Sorghum extracellular 43.56 43.23
PGSC0003DMT400095086 Potato plastid 40.91 43.2
OQU93456 Sorghum cytosol, extracellular 34.47 42.92
Bra004891.1-P Field mustard cytosol, nucleus, plastid 22.35 42.75
EES05488 Sorghum extracellular 43.94 42.49
Bra003421.1-P Field mustard extracellular 42.8 42.48
CDX67835 Canola extracellular 42.8 42.48
CDY71186 Canola extracellular 43.56 42.44
OQU92157 Sorghum extracellular 48.86 41.88
KXG40417 Sorghum mitochondrion 46.21 41.08
EER94500 Sorghum extracellular 44.32 40.34
EER91948 Sorghum extracellular 42.42 40.29
CDX74713 Canola extracellular 52.27 40.23
OQU93455 Sorghum extracellular 38.26 39.45
KXG40416 Sorghum extracellular, vacuole 47.73 39.38
OQU93459 Sorghum extracellular 39.39 39.1
KXG38933 Sorghum mitochondrion 46.97 38.87
OQU92156 Sorghum plastid 47.73 38.77
EES05315 Sorghum extracellular 46.21 38.36
EER95684 Sorghum extracellular 38.64 38.35
EER95683 Sorghum extracellular 38.26 37.97
OQU93457 Sorghum extracellular 38.26 37.97
OQU93458 Sorghum extracellular 38.26 37.97
CDY48362 Canola extracellular 46.59 34.45
Bra014484.1-P Field mustard extracellular 46.59 34.17
PGSC0003DMT400066943 Potato cytosol, plastid, vacuole 53.03 30.5
EER99370 Sorghum extracellular 30.3 29.2
EER95568 Sorghum extracellular 26.89 26.3
KXG38992 Sorghum extracellular 23.86 22.34
OQU89980 Sorghum extracellular, plasma membrane, vacuole 16.29 19.11
KXG20919 Sorghum plastid 23.11 13.77
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1EntrezGene:8073952UniProt:C5XRX3EnsemblPlants:EES07509
ProteinID:EES07509ProteinID:EES07509.1InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sf
GO:GO:0000003GO:GO:0005575GO:GO:0005576GO:GO:0008150GO:GO:0019953InterPro:IPR007112
InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908InterPro:LolPIPFAM:PF01357PFAM:PF03330
PRINTS:PR00829PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF52
InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837EnsemblPlantsGene:SORBI_3004G294500SUPFAM:SSF49590SUPFAM:SSF50685
unigene:Sbi.10258SignalP:SignalP-noTMUniParc:UPI0001A8603ERefSeq:XP_002454533.1::
Description
hypothetical protein
Coordinates
chr4:-:63460123..63462394
Molecular Weight (calculated)
27408.5 Da
IEP (calculated)
7.596
GRAVY (calculated)
0.034
Length
264 amino acids
Sequence
(BLAST)
001: MATKMVLCRF VALAALACLL RPGAPVELHR RLSAWSGDAG ATWYGAPTGA GSDGGACGYQ NAVDQPPFSS MIAAGSPSIF QNGEGCGSCY QVKCTGHASC
101: SGSPVTVVLT DECPGGACLA EPVHFDLSGT AFGALAKPGQ ADQLRSAGLL KIQYTRVPCN WNGMDIAFKV DGGSNANYLA VLIEYESGDG ELRSVELMQR
201: GGAAWAPMQR SWGAVWRYNS GAALQAPFSV RLTSGSGRTV VATNVIPAGW SPGATYRSVV NFNN
Best Arabidopsis Sequence Match ( AT2G45110.1 )
(BLAST)
001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF
Arabidopsis Description
EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.