Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g093390.2.1 | Tomato | extracellular, nucleus | 93.3 | 63.51 |
| VIT_09s0002g08510.t01 | Wine grape | extracellular | 77.32 | 53.76 |
| HORVU2Hr1G013380.1 | Barley | cytosol, extracellular, mitochondrion | 56.7 | 46.41 |
| HORVU2Hr1G013360.1 | Barley | extracellular | 58.25 | 45.02 |
| TraesCS2B01G122100.1 | Wheat | extracellular | 43.3 | 43.98 |
| Os04t0552000-00 | Rice | extracellular | 58.76 | 43.18 |
| TraesCS2A01G580200.1 | Wheat | extracellular | 55.15 | 42.63 |
| EES11234 | Sorghum | extracellular | 57.73 | 42.59 |
| TraesCS2A01G580300.1 | Wheat | extracellular | 54.64 | 42.57 |
| TraesCS2D01G078900.1 | Wheat | extracellular | 55.67 | 42.52 |
| HORVU0Hr1G016380.2 | Barley | extracellular | 57.73 | 42.26 |
| TraesCS2D01G592900.1 | Wheat | extracellular | 54.12 | 42.17 |
| TraesCS2D01G411000.1 | Wheat | extracellular | 56.7 | 41.98 |
| Zm00001d026170_P001 | Maize | extracellular | 56.7 | 41.98 |
| TraesCS2B01G607400.1 | Wheat | extracellular | 53.61 | 41.77 |
| Os05t0246300-01 | Rice | extracellular | 56.7 | 41.67 |
| TraesCS2B01G432300.1 | Wheat | plastid | 56.19 | 41.6 |
| TraesCS2A01G413600.1 | Wheat | extracellular | 56.19 | 41.6 |
| TraesCS6A01G249400.2 | Wheat | extracellular | 56.7 | 41.51 |
| TraesCS2D01G104800.1 | Wheat | extracellular | 54.12 | 41.34 |
| TraesCS2D01G078800.1 | Wheat | extracellular | 54.12 | 41.34 |
| TraesCS6D01G231400.1 | Wheat | extracellular | 56.19 | 40.98 |
| TraesCS2A01G081200.1 | Wheat | extracellular | 53.61 | 40.94 |
| TraesCS2B01G095600.1 | Wheat | extracellular | 53.61 | 40.78 |
| Zm00001d045861_P001 | Maize | mitochondrion | 55.67 | 40.75 |
| TraesCSU01G009600.1 | Wheat | extracellular | 53.09 | 40.71 |
| TraesCS2B01G095700.1 | Wheat | extracellular | 52.58 | 40.48 |
| Zm00001d045792_P001 | Maize | extracellular | 56.19 | 40.37 |
| TraesCS6A01G249700.1 | Wheat | extracellular | 55.15 | 40.23 |
| TraesCS2A01G080800.1 | Wheat | extracellular | 52.58 | 40.16 |
| Zm00001d017493_P001 | Maize | extracellular | 55.15 | 40.07 |
| EES07509 | Sorghum | extracellular | 54.12 | 39.77 |
| GSMUA_Achr2P13730_001 | Banana | extracellular | 53.61 | 39.69 |
| KXG19818 | Sorghum | extracellular | 52.58 | 39.38 |
| TraesCS2A01G105200.1 | Wheat | extracellular | 51.55 | 39.37 |
| KRH75302 | Soybean | extracellular | 56.19 | 39.35 |
| GSMUA_Achr2P13740_001 | Banana | extracellular | 53.09 | 39.31 |
| EER88254 | Sorghum | extracellular | 52.06 | 39.0 |
| KRH33426 | Soybean | extracellular | 54.64 | 38.97 |
| TraesCS2D01G078600.1 | Wheat | extracellular | 47.94 | 38.91 |
| HORVU2Hr1G097480.1 | Barley | extracellular | 56.7 | 38.87 |
| Os02t0658600-00 | Rice | plastid | 54.64 | 38.83 |
| KRH33423 | Soybean | extracellular | 55.15 | 38.63 |
| KRG88934 | Soybean | extracellular, vacuole | 55.15 | 38.63 |
| Zm00001d051368_P001 | Maize | extracellular | 30.93 | 37.97 |
| KRH65410 | Soybean | extracellular | 51.03 | 37.08 |
| GSMUA_Achr2P13750_001 | Banana | extracellular | 49.48 | 36.78 |
| PGSC0003DMT400030395 | Potato | cytosol, extracellular, mitochondrion, nucleus | 23.71 | 35.38 |
| HORVU2Hr1G013340.1 | Barley | extracellular | 51.03 | 33.9 |
| TraesCS5D01G384200.1 | Wheat | extracellular | 51.03 | 32.14 |
| TraesCS5B01G376500.1 | Wheat | extracellular | 51.03 | 32.04 |
| PGSC0003DMT400047177 | Potato | extracellular | 43.81 | 31.84 |
| EER93754 | Sorghum | extracellular | 49.48 | 31.37 |
| PGSC0003DMT400095086 | Potato | plastid | 40.21 | 31.2 |
| Os03t0645000-00 | Rice | mitochondrion | 50.0 | 30.99 |
| KXG37946 | Sorghum | extracellular | 49.48 | 29.54 |
| PGSC0003DMT400055827 | Potato | extracellular | 39.69 | 29.39 |
| GSMUA_AchrUn_... | Banana | extracellular | 26.29 | 28.33 |
| PGSC0003DMT400066943 | Potato | cytosol, plastid, vacuole | 60.31 | 25.49 |
| PGSC0003DMT400067459 | Potato | extracellular | 30.93 | 23.9 |
| PGSC0003DMT400068379 | Potato | mitochondrion | 27.32 | 23.56 |
| PGSC0003DMT400004660 | Potato | extracellular | 30.93 | 23.53 |
| HORVU5Hr1G092910.9 | Barley | plastid | 50.0 | 23.43 |
| PGSC0003DMT400052810 | Potato | extracellular | 29.38 | 22.53 |
| PGSC0003DMT400067458 | Potato | extracellular | 28.87 | 22.31 |
| PGSC0003DMT400067456 | Potato | extracellular | 28.87 | 22.13 |
| PGSC0003DMT400047948 | Potato | extracellular | 26.29 | 19.62 |
| Zm00001d033231_P003 | Maize | extracellular | 48.45 | 13.17 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0019953 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 |
| UniProt:M1BMI7 | PFAM:PF01357 | PFAM:PF03330 | EnsemblPlantsGene:PGSC0003DMG400018844 | PGSC:PGSC0003DMG400018844 | EnsemblPlants:PGSC0003DMT400048506 |
| PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF49 | InterPro:RlpA-like_DPBB |
| InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | UniParc:UPI0002968989 | : |
Description
Beta expansin 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400018844]
Coordinates
chr3:+:38408070..38408908
Molecular Weight (calculated)
20747.9 Da
IEP (calculated)
8.667
GRAVY (calculated)
-0.156
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAGGSCGYG SAVSQAPFSS FVTGIGPSLY KSGKECGACY QVKCTKKMHG SCSGKGVRVV ITDFCPGGPC VAQSAHFDLS GTAFGSMAIP GQEQKLRDAG
101: VLQILVIEFE EGDGDLAKVE LKEKISSITK NSKWRQMQQS WGAVWKLDAG SELHPPFSIR LTSQYSDQIL IAKNVIPTGW QPGATYRSLV NYRV
101: VLQILVIEFE EGDGDLAKVE LKEKISSITK NSKWRQMQQS WGAVWKLDAG SELHPPFSIR LTSQYSDQIL IAKNVIPTGW QPGATYRSLV NYRV
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.