Factsheet for PGSC0003DMT400067456

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g077900.2.1	Tomato	extracellular	97.63	97.63
VIT_00s1455g00010.t01	Wine grape	extracellular	60.87	61.35
VIT_00s0309g00050.t01	Wine grape	extracellular	57.31	57.77
VIT_00s0309g00090.t01	Wine grape	extracellular	56.13	56.57
KRH28194	Soybean	extracellular	52.57	52.99
KRH04222	Soybean	extracellular	52.57	52.99
CDY42954	Canola	extracellular	52.17	52.8
KRH77296	Soybean	extracellular	52.17	52.59
PGSC0003DMT400068379	Potato	mitochondrion	46.64	52.44
Bra012687.1-P	Field mustard	extracellular	51.78	52.4
Bra040107.1-P	Field mustard	extracellular	51.78	52.4
AT4G17030.1	Thale cress	extracellular	51.78	52.4
KRH57515	Soybean	extracellular	51.78	52.19
CDY35606	Canola	extracellular	51.38	52.0
Bra012684.1-P	Field mustard	extracellular	50.59	51.2
CDY09659	Canola	plasma membrane	50.59	51.2
CDY65447	Canola	extracellular	50.59	51.2
CDX90493	Canola	cytosol, extracellular, nucleus	25.69	49.62
PGSC0003DMT400067458	Potato	extracellular	47.43	47.81
PGSC0003DMT400067459	Potato	extracellular	45.45	45.82
KRH04221	Soybean	extracellular	43.48	44.53
KRH57512	Soybean	extracellular	43.08	44.13
KRH57508	Soybean	endoplasmic reticulum	42.29	43.85
KRH04218	Soybean	extracellular	41.9	42.4
KRH04215	Soybean	nucleus	41.9	42.4
KRH04220	Soybean	endoplasmic reticulum	41.5	42.34
PGSC0003DMT400004660	Potato	extracellular	41.11	40.78
PGSC0003DMT400052810	Potato	extracellular	39.92	39.92
PGSC0003DMT400047948	Potato	extracellular	35.97	35.0
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	16.21	31.54
PGSC0003DMT400048506	Potato	plastid	22.13	28.87
PGSC0003DMT400055827	Potato	extracellular	27.67	26.72
PGSC0003DMT400047177	Potato	extracellular	28.06	26.59
PGSC0003DMT400095086	Potato	plastid	22.92	23.2
PGSC0003DMT400066943	Potato	cytosol, plastid, vacuole	25.69	14.16

Protein Annotations

EntrezGene:102592278	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.4	ProteinID:AFW90642	ProteinID:AFW90642.1
InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	EMBL:JX576286	UniProt:M1CHA1
PFAM:PF01357	PFAM:PF03330	EnsemblPlantsGene:PGSC0003DMG400026220	PGSC:PGSC0003DMG400026220	EnsemblPlants:PGSC0003DMT400067456	PRINTS:PR01225
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF10	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002959851	RefSeq:XP_006359217.1

Description

Major pollen allergen Ory s 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400026220]

Coordinates

chr8:+:51057961..51061006

Molecular Weight (calculated)

28246.6 Da

IEP (calculated)

6.379

GRAVY (calculated)

-0.108

Length

253 amino acids

Sequence
(BLAST)

001: MVFNNSHCII FLLVTIIIYP AICYGQEANS LYTRATYYGS PDCYGTPSGA CGFGEYGRKI YDGKVSGVSR LYRNGTGCGA CYQVRCKVPG HCTDEGTKIV
101: VTDHGEGDHT DFILSVRAYS DMATSGMANH LLAYGVVDVE YRRVPCTYYG YNLMIKVHEH SRFCNYLAIV PIYQSGAFDI EAVEVWQADC KEWRGMRKAY
201: GAVWDMPNPP KGSLTFRVQV SLNGEAAKWV QLADVLPDEW KAGIAYDTYL MLD

Best Arabidopsis Sequence Match ( AT4G17030.1 )
(BLAST)

001: MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY GEFGRDINNG EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT

Arabidopsis Description

EXLB1Expansin-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WRS3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.