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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • nucleus 1
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012687.1-P Field mustard extracellular 99.24 52.0
CDY65447 Canola extracellular 98.47 51.6
CDY09659 Canola plasma membrane 97.71 51.2
CDY42954 Canola extracellular 90.08 47.2
AT4G17030.1 Thale cress extracellular 89.31 46.8
CDY35606 Canola extracellular 89.31 46.8
KRH77296 Soybean extracellular 57.25 29.88
KRH28194 Soybean extracellular 57.25 29.88
PGSC0003DMT400068379 Potato mitochondrion 51.15 29.78
KRH04222 Soybean extracellular 56.49 29.48
KRH57515 Soybean extracellular 55.73 29.08
VIT_00s1455g00010.t01 Wine grape extracellular 51.15 26.69
VIT_00s0309g00050.t01 Wine grape extracellular 50.38 26.29
Solyc06g060970.1.1 Tomato extracellular 49.62 26.21
Solyc08g077900.2.1 Tomato extracellular 50.38 26.09
PGSC0003DMT400067456 Potato extracellular 49.62 25.69
VIT_00s0309g00090.t01 Wine grape extracellular 48.85 25.5
KRH04218 Soybean extracellular 45.8 24.0
KRH04215 Soybean nucleus 45.8 24.0
PGSC0003DMT400067458 Potato extracellular 45.8 23.9
KRH57512 Soybean extracellular 41.22 21.86
KRH04221 Soybean extracellular 41.22 21.86
KRH04220 Soybean endoplasmic reticulum 38.17 20.16
CDY72505 Canola cytosol 24.43 20.0
PGSC0003DMT400067459 Potato extracellular 38.17 19.92
Solyc08g077910.2.1 Tomato extracellular 38.17 19.92
CDY61895 Canola extracellular 40.46 19.7
CDY52801 Canola extracellular 40.46 19.7
KRH57508 Soybean endoplasmic reticulum 36.64 19.67
CDY72655 Canola cytosol, plastid 25.19 19.53
CDY69288 Canola extracellular 38.93 19.32
CDY72634 Canola extracellular 38.93 19.25
CDY64278 Canola extracellular 38.93 19.25
CDY18951 Canola extracellular 35.11 16.73
CDY70406 Canola extracellular 32.82 15.69
CDX74710 Canola extracellular 32.06 15.33
CDY72345 Canola cytosol 26.72 14.34
CDY14888 Canola extracellular 28.24 13.96
CDY18950 Canola cytosol, extracellular, plastid 25.19 13.92
CDX83404 Canola extracellular 27.48 13.9
CDX74711 Canola extracellular 26.72 13.41
CDY18948 Canola extracellular 19.85 13.33
CDX96901 Canola extracellular 26.72 13.21
CDY05789 Canola extracellular 26.72 13.21
CDY18990 Canola extracellular 26.72 13.21
CDY18946 Canola extracellular 26.72 13.16
CDX74713 Canola extracellular 34.35 13.12
CDY70556 Canola extracellular 25.95 12.83
CDY58728 Canola extracellular 25.95 12.83
CDY31940 Canola extracellular 25.95 12.83
CDX95627 Canola extracellular 22.9 10.75
CDY71186 Canola extracellular 21.37 10.33
CDX67835 Canola extracellular 20.61 10.15
CDY48362 Canola extracellular 24.43 8.96
Protein Annotations
Gene3D:2.60.40.760MapMan:35.1GO:A0A078DTG3EnsemblPlants:CDX90493ProteinID:CDX90493ProteinID:CDX90493.1
InterPro:Expan_Lol_pIInterPro:Expansin_CBDInterPro:Expansin_CBD_sfGO:GO:0000003GO:GO:0005575GO:GO:0005576
GO:GO:0008150GO:GO:0019953EnsemblPlantsGene:GSBRNA2T00151110001InterPro:IPR007117InterPro:IPR036749InterPro:LolPI
PFAM:PF01357PRINTS:PR00829PRINTS:PR01225PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF10
SUPFAM:SSF49590UniParc:UPI0004EEB4AF::::
Description
BnaA03g42880D
Coordinates
chrLK031863:+:510623..511498
Molecular Weight (calculated)
15025.9 Da
IEP (calculated)
7.493
GRAVY (calculated)
-0.200
Length
131 amino acids
Sequence
(BLAST)
001: MARPGTEFQL YSFGVVDVEY QRVPCRYGGY NLVYKIHEKS YNPHYLAILI LYVGGVNDIL AVEVWQEDCK EWKRMRRVFG AVHDYQNPPR GTLSLRFLVY
101: GSAGLNWVES QNALPADWTA GATYNSNILL T
Best Arabidopsis Sequence Match ( AT4G17030.1 )
(BLAST)
001: MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY GEFGRDINNG EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT
Arabidopsis Description
EXLB1Expansin-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WRS3]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.