Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra012687.1-P | Field mustard | extracellular | 99.24 | 52.0 |
CDY65447 | Canola | extracellular | 98.47 | 51.6 |
CDY09659 | Canola | plasma membrane | 97.71 | 51.2 |
CDY42954 | Canola | extracellular | 90.08 | 47.2 |
AT4G17030.1 | Thale cress | extracellular | 89.31 | 46.8 |
CDY35606 | Canola | extracellular | 89.31 | 46.8 |
KRH77296 | Soybean | extracellular | 57.25 | 29.88 |
KRH28194 | Soybean | extracellular | 57.25 | 29.88 |
PGSC0003DMT400068379 | Potato | mitochondrion | 51.15 | 29.78 |
KRH04222 | Soybean | extracellular | 56.49 | 29.48 |
KRH57515 | Soybean | extracellular | 55.73 | 29.08 |
VIT_00s1455g00010.t01 | Wine grape | extracellular | 51.15 | 26.69 |
VIT_00s0309g00050.t01 | Wine grape | extracellular | 50.38 | 26.29 |
Solyc06g060970.1.1 | Tomato | extracellular | 49.62 | 26.21 |
Solyc08g077900.2.1 | Tomato | extracellular | 50.38 | 26.09 |
PGSC0003DMT400067456 | Potato | extracellular | 49.62 | 25.69 |
VIT_00s0309g00090.t01 | Wine grape | extracellular | 48.85 | 25.5 |
KRH04218 | Soybean | extracellular | 45.8 | 24.0 |
KRH04215 | Soybean | nucleus | 45.8 | 24.0 |
PGSC0003DMT400067458 | Potato | extracellular | 45.8 | 23.9 |
KRH57512 | Soybean | extracellular | 41.22 | 21.86 |
KRH04221 | Soybean | extracellular | 41.22 | 21.86 |
KRH04220 | Soybean | endoplasmic reticulum | 38.17 | 20.16 |
CDY72505 | Canola | cytosol | 24.43 | 20.0 |
PGSC0003DMT400067459 | Potato | extracellular | 38.17 | 19.92 |
Solyc08g077910.2.1 | Tomato | extracellular | 38.17 | 19.92 |
CDY61895 | Canola | extracellular | 40.46 | 19.7 |
CDY52801 | Canola | extracellular | 40.46 | 19.7 |
KRH57508 | Soybean | endoplasmic reticulum | 36.64 | 19.67 |
CDY72655 | Canola | cytosol, plastid | 25.19 | 19.53 |
CDY69288 | Canola | extracellular | 38.93 | 19.32 |
CDY72634 | Canola | extracellular | 38.93 | 19.25 |
CDY64278 | Canola | extracellular | 38.93 | 19.25 |
CDY18951 | Canola | extracellular | 35.11 | 16.73 |
CDY70406 | Canola | extracellular | 32.82 | 15.69 |
CDX74710 | Canola | extracellular | 32.06 | 15.33 |
CDY72345 | Canola | cytosol | 26.72 | 14.34 |
CDY14888 | Canola | extracellular | 28.24 | 13.96 |
CDY18950 | Canola | cytosol, extracellular, plastid | 25.19 | 13.92 |
CDX83404 | Canola | extracellular | 27.48 | 13.9 |
CDX74711 | Canola | extracellular | 26.72 | 13.41 |
CDY18948 | Canola | extracellular | 19.85 | 13.33 |
CDX96901 | Canola | extracellular | 26.72 | 13.21 |
CDY05789 | Canola | extracellular | 26.72 | 13.21 |
CDY18990 | Canola | extracellular | 26.72 | 13.21 |
CDY18946 | Canola | extracellular | 26.72 | 13.16 |
CDX74713 | Canola | extracellular | 34.35 | 13.12 |
CDY70556 | Canola | extracellular | 25.95 | 12.83 |
CDY58728 | Canola | extracellular | 25.95 | 12.83 |
CDY31940 | Canola | extracellular | 25.95 | 12.83 |
CDX95627 | Canola | extracellular | 22.9 | 10.75 |
CDY71186 | Canola | extracellular | 21.37 | 10.33 |
CDX67835 | Canola | extracellular | 20.61 | 10.15 |
CDY48362 | Canola | extracellular | 24.43 | 8.96 |
Protein Annotations
Gene3D:2.60.40.760 | MapMan:35.1 | GO:A0A078DTG3 | EnsemblPlants:CDX90493 | ProteinID:CDX90493 | ProteinID:CDX90493.1 |
InterPro:Expan_Lol_pI | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 |
GO:GO:0008150 | GO:GO:0019953 | EnsemblPlantsGene:GSBRNA2T00151110001 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:LolPI |
PFAM:PF01357 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF10 |
SUPFAM:SSF49590 | UniParc:UPI0004EEB4AF | : | : | : | : |
Description
BnaA03g42880D
Coordinates
chrLK031863:+:510623..511498
Molecular Weight (calculated)
15025.9 Da
IEP (calculated)
7.493
GRAVY (calculated)
-0.200
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MARPGTEFQL YSFGVVDVEY QRVPCRYGGY NLVYKIHEKS YNPHYLAILI LYVGGVNDIL AVEVWQEDCK EWKRMRRVFG AVHDYQNPPR GTLSLRFLVY
101: GSAGLNWVES QNALPADWTA GATYNSNILL T
101: GSAGLNWVES QNALPADWTA GATYNSNILL T
001: MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY GEFGRDINNG EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT
Arabidopsis Description
EXLB1Expansin-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WRS3]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.