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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY64278 Canola extracellular 99.25 99.25
Bra033563.1-P Field mustard extracellular 96.98 97.35
CDY69288 Canola extracellular 96.98 97.35
CDY61895 Canola extracellular 89.43 88.1
CDY52801 Canola extracellular 89.06 87.73
AT3G45970.1 Thale cress extracellular 85.66 85.66
AT4G38400.1 Thale cress extracellular 85.66 85.66
AT3G45960.2 Thale cress extracellular 80.0 80.61
KRH24119 Soybean extracellular 62.64 63.6
KRH29091 Soybean extracellular 61.13 62.55
VIT_03s0038g03430.t01 Wine grape extracellular 60.38 61.78
PGSC0003DMT400047948 Potato extracellular 60.38 61.54
Solyc01g112000.2.1 Tomato extracellular 59.62 60.54
GSMUA_Achr11P... Banana extracellular 58.49 58.27
GSMUA_Achr5P19030_001 Banana extracellular 55.85 56.06
GSMUA_Achr5P11590_001 Banana extracellular 53.96 54.79
EER95568 Sorghum extracellular 53.21 52.22
GSMUA_AchrUn_... Banana extracellular 36.98 52.13
GSMUA_Achr11P... Banana extracellular 51.7 51.7
TraesCS4B01G326900.1 Wheat extracellular 53.58 51.64
TraesCS4B01G327200.1 Wheat extracellular 52.08 51.49
TraesCS5A01G498900.1 Wheat extracellular 53.21 51.27
TraesCS4D01G323600.1 Wheat extracellular 53.58 51.26
HORVU4Hr1G081990.2 Barley extracellular 53.58 50.71
Zm00001d027520_P001 Maize extracellular 52.83 50.36
TraesCS4D01G324000.1 Wheat extracellular 51.7 50.18
TraesCS5A01G499300.1 Wheat nucleus 51.7 50.18
Zm00001d048344_P002 Maize extracellular 51.7 50.0
TraesCS4D01G323900.1 Wheat golgi 50.94 49.82
Os10t0542400-01 Rice extracellular 51.32 49.45
Os03t0132200-01 Rice extracellular, plastid 51.32 48.75
Zm00001d029783_P003 Maize extracellular 50.57 48.73
TraesCS5A01G499100.1 Wheat extracellular 45.66 48.4
HORVU1Hr1G052290.4 Barley extracellular 50.19 48.01
TraesCS1B01G217200.1 Wheat extracellular 49.81 48.0
HORVU4Hr1G081800.6 Barley extracellular, golgi, plastid 53.96 47.83
TraesCS4B01G327100.1 Wheat golgi 48.68 47.6
KXG38992 Sorghum extracellular 49.81 46.81
TraesCS5A01G499200.1 Wheat extracellular 46.42 46.77
TraesCS1D01G206700.1 Wheat extracellular 49.81 46.64
GSMUA_Achr1P02170_001 Banana extracellular, peroxisome, plastid 53.96 46.58
TraesCS1A01G203200.1 Wheat extracellular 49.43 46.45
Os07t0475400-01 Rice extracellular 47.92 46.01
EER99370 Sorghum extracellular 47.17 45.62
Zm00001d006360_P001 Maize extracellular 46.42 45.22
TraesCS4D01G323800.2 Wheat extracellular 49.81 43.71
CDX90493 Canola cytosol, extracellular, nucleus 19.25 38.93
CDY65447 Canola extracellular 32.83 34.8
TraesCS7A01G545900.1 Wheat extracellular 40.38 34.63
TraesCSU01G099200.1 Wheat endoplasmic reticulum, extracellular 39.62 34.09
CDY09659 Canola plasma membrane 32.08 34.0
CDY42954 Canola extracellular 32.08 34.0
TraesCS7D01G532200.1 Wheat extracellular 39.62 33.98
TraesCS7A01G545800.1 Wheat extracellular 38.49 33.89
HORVU7Hr1G119340.3 Barley extracellular, golgi, plastid 39.25 33.66
CDY35606 Canola extracellular 31.7 33.6
TraesCS7B01G468700.1 Wheat endoplasmic reticulum, extracellular 40.0 33.54
TraesCS7B01G469200.1 Wheat endoplasmic reticulum, extracellular 40.0 33.23
HORVU7Hr1G119200.1 Barley golgi, plastid, vacuole 39.62 33.23
TraesCS7A01G546300.1 Wheat endoplasmic reticulum, extracellular 40.0 33.02
TraesCS7D01G532500.1 Wheat extracellular 39.62 32.71
TraesCS7A01G546000.1 Wheat endoplasmic reticulum, extracellular 39.62 32.51
TraesCS7D01G532400.1 Wheat extracellular 37.36 32.14
HORVU7Hr1G119220.1 Barley extracellular, golgi, plastid 37.74 31.95
Os06t0725300-01 Rice endoplasmic reticulum 37.36 31.63
TraesCSU01G099100.1 Wheat extracellular, golgi 36.23 30.77
Zm00001d014826_P001 Maize endoplasmic reticulum, extracellular, vacuole 36.6 30.41
CDY70406 Canola extracellular 28.68 27.74
CDX74710 Canola extracellular 28.68 27.74
CDY18948 Canola extracellular 20.38 27.69
CDY18951 Canola extracellular 28.3 27.27
CDY18950 Canola cytosol, extracellular, plastid 24.15 27.0
CDY72345 Canola cytosol 24.53 26.64
CDX74711 Canola extracellular 25.66 26.05
CDX96901 Canola extracellular 25.66 25.66
CDY18990 Canola extracellular 25.28 25.28
CDY14888 Canola extracellular 25.28 25.28
CDY70556 Canola extracellular 25.28 25.28
CDY05789 Canola extracellular 25.28 25.28
CDY58728 Canola extracellular 24.91 24.91
CDY31940 Canola extracellular 24.91 24.91
CDY72655 Canola cytosol, plastid 15.85 24.85
CDY18946 Canola extracellular 24.91 24.81
CDX83404 Canola extracellular 24.15 24.71
CDX67835 Canola extracellular 24.53 24.44
CDY71186 Canola extracellular 24.53 23.99
CDY72505 Canola cytosol 14.34 23.75
KXG20919 Sorghum plastid 39.62 23.7
CDX74713 Canola extracellular 27.55 21.28
CDX95627 Canola extracellular 22.26 21.15
CDY48362 Canola extracellular 25.66 19.05
TraesCS7B01G469100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 38.49 15.84
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:21.4.2.2GO:A0A078K129UniProt:A0A078K129EnsemblPlants:CDY72634
ProteinID:CDY72634ProteinID:CDY72634.1InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sf
GO:GO:0000003GO:GO:0005575GO:GO:0005576GO:GO:0008150GO:GO:0019953EnsemblPlantsGene:GSBRNA2T00034065001
InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908InterPro:LolPIPFAM:PF01357
PFAM:PF03330PRINTS:PR00829PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692
PANTHER:PTHR31692:SF4InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSUPFAM:SSF49590SUPFAM:SSF50685SignalP:SignalP-noTM
UniParc:UPI0004EC9CA6SEG:seg::::
Description
BnaCnng78620DBnaCnng78620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K129]
Coordinates
chrLK052342:+:663..1868
Molecular Weight (calculated)
28701.5 Da
IEP (calculated)
8.197
GRAVY (calculated)
0.076
Length
265 amino acids
Sequence
(BLAST)
001: MGSCFLVVFV VLLFSSSVNA CDRCLHRSKA AYFSSASVLS SGACSYGSMA TGFFAGHIAA AVPSIYKDGA GCGACFQVRC TNPSLCSTKG TAVMVTDLNM
101: SNQTDLLLSS RAFRAMAKPV LGADRDLLRQ GIVDVQYQRV PCDYGNKKMM NVRVEEASKK PNYLAIKLLY QGGQTEVVAI DIAQVGSSHW SYMTRSRGAV
201: WVTDKVPTGP LQFRFVVTAG FDGKMLWSPR VLPANWEAGK IYDAGVQITD IAQEGCDPCD DHIWN
Best Arabidopsis Sequence Match ( AT3G45970.1 )
(BLAST)
001: MGSFLFLIVV IFLFSSSVNA CDRCLHRSKA AYFSSASALS SGACAYGSMA TSFFAGHIAA AIPSIYKDGA GCGACFQVRC KNPKLCSTKG TIVMITDLNK
101: SNQTDLVLSS RAFRAMAKPI VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID IAQVGSSPNW GYMTRSHGAV
201: WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK IYDAGVQITD IAQEGCDPCD AHIWN
Arabidopsis Description
EXLA1Expansin-like A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.