Factsheet for TraesCSU01G099100.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G532400.1	Wheat	extracellular	80.13	81.17
TraesCS7A01G545900.1	Wheat	extracellular	75.32	76.05
HORVU7Hr1G119220.1	Barley	extracellular, golgi, plastid	73.08	72.84
TraesCSU01G099200.1	Wheat	endoplasmic reticulum, extracellular	64.74	65.58
Os06t0725300-01	Rice	endoplasmic reticulum	51.92	51.76
Zm00001d014826_P001	Maize	endoplasmic reticulum, extracellular, vacuole	46.47	45.45
KRH29091	Soybean	extracellular	35.26	42.47
GSMUA_Achr11P...	Banana	extracellular	35.9	42.11
KRH24119	Soybean	extracellular	34.94	41.76
GSMUA_Achr5P19030_001	Banana	extracellular	33.65	39.77
GSMUA_Achr11P...	Banana	extracellular	33.65	39.62
Solyc01g112000.2.1	Tomato	extracellular	32.69	39.08
PGSC0003DMT400047948	Potato	extracellular	31.73	38.08
GSMUA_Achr5P11590_001	Banana	extracellular	31.73	37.93
VIT_03s0038g03430.t01	Wine grape	extracellular	31.09	37.45
CDY69288	Canola	extracellular	31.41	37.12
Bra033563.1-P	Field mustard	extracellular	31.41	37.12
AT4G38400.1	Thale cress	extracellular	31.41	36.98
CDY52801	Canola	extracellular	31.73	36.8
GSMUA_AchrUn_...	Banana	extracellular	22.12	36.7
CDY61895	Canola	extracellular	31.41	36.43
Bra011899.1-P	Field mustard	extracellular	31.41	36.43
CDY72634	Canola	extracellular	30.77	36.23
CDY64278	Canola	extracellular	30.77	36.23
AT3G45960.2	Thale cress	extracellular	29.17	34.6
KXG20919	Sorghum	plastid	49.04	34.54
AT3G45970.1	Thale cress	extracellular	29.17	34.34
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	32.69	33.22
TraesCSU01G009600.1	Wheat	extracellular	19.87	24.51
TraesCSU01G085500.1	Wheat	cytosol	14.1	22.45
TraesCSU01G216000.1	Wheat	cytosol	10.9	22.22
TraesCSU01G236100.1	Wheat	cytosol	7.05	21.15
TraesCSU01G271700.1	Wheat	cytosol	7.05	21.15

Protein Annotations

EnsemblPlants:TraesCSU01G099100.1	EnsemblPlantsGene:TraesCSU01G099100	Gene3D:2.40.40.10	Gene3D:2.60.40.760	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:RlpA-like_sf
PANTHER:PTHR31692	PANTHER:PTHR31692:SF25	PFAM:PF01357	PFscan:PS50842	PFscan:PS50843	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF49590	SUPFAM:SSF50685	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrUn:+:87838178..87839116

Molecular Weight (calculated)

32541.5 Da

IEP (calculated)

8.211

GRAVY (calculated)

-0.039

Length

312 amino acids

Sequence
(BLAST)

001: MARLLLVLVL AVAAAVAQSL PAHVSAAPSP SWSYRCGWCP RRSTASLLPP DAGILIGAAC GYCDPADLAA DGGFHIATVS AGFFHSGRAC GACYQLRCRD
101: RGACAEDGVK VVVVADVAKP ATDTNRTGGS QFQLTKDAFA ALTASRDDGQ LRSLVDAAVN VDFRRIPCAY KSKNLAVRVD ETSSRNRGHL ALRFLYHGGQ
201: TDIVAVEVAQ AAALGAAQSA AAPSPMNWQY MTRHQGSPGG WRTSRAPAGP LQLRLVVTAG SGSKWLRAEG AMLPAKWQPG AVYDTGLRVT EVAANTCGSA
301: SCSAGDDNHD DE

Best Arabidopsis Sequence Match ( AT4G38400.1 )
(BLAST)

001: MLQGFLFLLS VVLLFSSSAA ACDRCLHSSK AAYFSSASAL SSGACAYGSM ATGFFAGHIA AALPSIYKDG SGCGACFQVR CKNPTLCSSK GTTVIVTDLN
101: KTNQTDLVLS SRAFRAMAKP VVGADRDLLK QGIVDIEYRR VPCDYGNKKM NVRVEESSKN PNYLAIKLLY QGGQTEVVAI YIAQVGSSHW SYMTRSHGAV
201: WVTDKVPNGA LQFRFVVTAG YDGKMVWSQR VLPANWEAGK SYDAGVQITD IAQEGCDPCD DHIWN

Arabidopsis Description

EXLA2Expansin-like A2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVE5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.