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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69288 Canola extracellular 100.0 100.0
CDY64278 Canola extracellular 98.11 97.74
CDY72634 Canola extracellular 97.35 96.98
Bra011899.1-P Field mustard extracellular 90.53 88.85
AT4G38400.1 Thale cress extracellular 87.12 86.79
AT3G45970.1 Thale cress extracellular 85.98 85.66
AT3G45960.2 Thale cress extracellular 80.3 80.61
KRH24119 Soybean extracellular 64.39 65.13
KRH29091 Soybean extracellular 62.88 64.09
PGSC0003DMT400047948 Potato extracellular 62.5 63.46
VIT_03s0038g03430.t01 Wine grape extracellular 61.36 62.55
Solyc01g112000.2.1 Tomato extracellular 61.74 62.45
GSMUA_Achr11P... Banana extracellular 59.09 58.65
GSMUA_Achr5P19030_001 Banana extracellular 56.82 56.82
GSMUA_Achr5P11590_001 Banana extracellular 54.55 55.17
EER95568 Sorghum extracellular 54.17 52.96
TraesCS4B01G326900.1 Wheat extracellular 54.92 52.73
GSMUA_AchrUn_... Banana extracellular 37.5 52.66
TraesCS4B01G327200.1 Wheat extracellular 53.41 52.61
GSMUA_Achr11P... Banana extracellular 52.65 52.45
TraesCS5A01G498900.1 Wheat extracellular 54.55 52.36
TraesCS4D01G323600.1 Wheat extracellular 54.92 52.35
HORVU4Hr1G081990.2 Barley extracellular 54.92 51.79
TraesCS4D01G324000.1 Wheat extracellular 53.03 51.28
TraesCS5A01G499300.1 Wheat nucleus 53.03 51.28
Zm00001d027520_P001 Maize extracellular 53.79 51.08
TraesCS4D01G323900.1 Wheat golgi 51.89 50.55
Os10t0542400-01 Rice extracellular 52.65 50.55
Zm00001d048344_P002 Maize extracellular 52.27 50.37
Zm00001d029783_P003 Maize extracellular 52.27 50.18
Os03t0132200-01 Rice extracellular, plastid 52.65 49.82
HORVU1Hr1G052290.4 Barley extracellular 51.89 49.46
TraesCS5A01G499100.1 Wheat extracellular 46.59 49.2
TraesCS1B01G217200.1 Wheat extracellular 51.14 49.09
HORVU4Hr1G081800.6 Barley extracellular, golgi, plastid 54.92 48.49
TraesCS4B01G327100.1 Wheat golgi 49.62 48.34
KXG38992 Sorghum extracellular 51.52 48.23
TraesCS1A01G203200.1 Wheat extracellular 51.14 47.87
TraesCS5A01G499200.1 Wheat extracellular 47.35 47.53
TraesCS1D01G206700.1 Wheat extracellular 50.76 47.35
GSMUA_Achr1P02170_001 Banana extracellular, peroxisome, plastid 54.92 47.23
EER99370 Sorghum extracellular 48.11 46.35
Os07t0475400-01 Rice extracellular 48.11 46.01
Zm00001d006360_P001 Maize extracellular 46.97 45.59
TraesCS4D01G323800.2 Wheat extracellular 50.76 44.37
TraesCS7A01G545900.1 Wheat extracellular 41.29 35.28
Bra012687.1-P Field mustard extracellular 33.33 35.2
Bra012684.1-P Field mustard extracellular 33.33 35.2
TraesCSU01G099200.1 Wheat endoplasmic reticulum, extracellular 40.53 34.74
TraesCS7D01G532200.1 Wheat extracellular 40.53 34.63
TraesCS7A01G545800.1 Wheat extracellular 39.39 34.55
Bra040107.1-P Field mustard extracellular 32.58 34.4
HORVU7Hr1G119340.3 Barley extracellular, golgi, plastid 40.15 34.3
TraesCS7B01G468700.1 Wheat endoplasmic reticulum, extracellular 40.91 34.18
HORVU7Hr1G119200.1 Barley golgi, plastid, vacuole 40.53 33.86
TraesCS7B01G469200.1 Wheat endoplasmic reticulum, extracellular 40.91 33.86
TraesCS7A01G546300.1 Wheat endoplasmic reticulum, extracellular 40.91 33.64
TraesCS7D01G532500.1 Wheat extracellular 40.53 33.33
TraesCS7A01G546000.1 Wheat endoplasmic reticulum, extracellular 40.53 33.13
HORVU7Hr1G119220.1 Barley extracellular, golgi, plastid 39.02 32.91
TraesCS7D01G532400.1 Wheat extracellular 38.26 32.79
Os06t0725300-01 Rice endoplasmic reticulum 37.88 31.95
TraesCSU01G099100.1 Wheat extracellular, golgi 37.12 31.41
Zm00001d014826_P001 Maize endoplasmic reticulum, extracellular, vacuole 36.74 30.41
Bra004889.1-P Field mustard extracellular 29.55 28.36
Bra024215.1-P Field mustard extracellular 26.14 26.04
Bra026272.1-P Field mustard extracellular 26.14 26.04
Bra036499.1-P Field mustard extracellular 25.76 25.66
Bra035987.1-P Field mustard extracellular 25.76 25.66
Bra000370.1-P Field mustard extracellular 25.0 25.48
Bra003421.1-P Field mustard extracellular 25.0 24.81
KXG20919 Sorghum plastid 40.15 23.93
Bra004890.1-P Field mustard extracellular 28.79 23.9
Bra004891.1-P Field mustard cytosol, nucleus, plastid 11.36 21.74
Bra014484.1-P Field mustard extracellular 26.14 19.17
TraesCS7B01G469100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 39.02 15.99
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:21.4.2.2EnsemblPlantsGene:Bra033563EnsemblPlants:Bra033563.1EnsemblPlants:Bra033563.1-P
InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sfGO:GO:0000003GO:GO:0005575
GO:GO:0005576GO:GO:0008150GO:GO:0019953InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749
InterPro:IPR036908InterPro:LolPIUniProt:M4EXM6PFAM:PF01357PFAM:PF03330PRINTS:PR00829
PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF4InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF49590SUPFAM:SSF50685SignalP:SignalP-noTMUniParc:UPI000253F954
SEG:seg:::::
Description
AT4G38400 (E=3e-118) ATEXLA2, EXPL2, ATEXPL2, ATHEXP BETA 2.2 | ATEXLA2 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A2)
Coordinates
chrA06:+:26215103..26216058
Molecular Weight (calculated)
28565.2 Da
IEP (calculated)
8.200
GRAVY (calculated)
0.027
Length
264 amino acids
Sequence
(BLAST)
001: MGSCFLVLVV LLFSSSVNAC DRCLHRSKAA YFSSASALSS GACSYGSMAT GFFAGHIAAA VPSIYKDGAG CGACFQVRCT NPSLCSTKGT TVMVTDLNRS
101: NQTDLLLSSR AFRAMAKPVL GADRDLLRQG IVDVQYQRVP CDYGNKKMMN VRVEESSKKP NYLAIKLLYQ GGQTEVVAID IAQVGSSHWS YMTRSHGAVW
201: VTDKVPTGPL QFRFVVTAGF DGKMLWSPRV LPANWEAGKI YDAGVQITDI AQEGCDPCDD HIWS
Best Arabidopsis Sequence Match ( AT3G45970.1 )
(BLAST)
001: MGSFLFLIVV IFLFSSSVNA CDRCLHRSKA AYFSSASALS SGACAYGSMA TSFFAGHIAA AIPSIYKDGA GCGACFQVRC KNPKLCSTKG TIVMITDLNK
101: SNQTDLVLSS RAFRAMAKPI VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID IAQVGSSPNW GYMTRSHGAV
201: WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK IYDAGVQITD IAQEGCDPCD AHIWN
Arabidopsis Description
EXLA1Expansin-like A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.