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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX67835 Canola extracellular 100.0 100.0
AT3G60570.1 Thale cress extracellular 81.95 82.58
Bra014484.1-P Field mustard extracellular 76.32 56.39
Bra000370.1-P Field mustard extracellular 50.38 51.74
Bra035987.1-P Field mustard extracellular 51.5 51.7
Bra004891.1-P Field mustard cytosol, nucleus, plastid 24.44 47.1
HORVU2Hr1G013360.1 Barley extracellular 43.23 45.82
TraesCS2D01G078900.1 Wheat extracellular 42.86 44.88
TraesCS2A01G081200.1 Wheat extracellular 42.86 44.88
TraesCS2B01G095600.1 Wheat extracellular 42.48 44.31
HORVU2Hr1G013380.1 Barley cytosol, extracellular, mitochondrion 39.47 44.3
GSMUA_Achr2P13730_001 Banana extracellular 43.61 44.27
GSMUA_Achr2P13750_001 Banana extracellular 43.23 44.06
GSMUA_Achr2P13740_001 Banana extracellular 43.23 43.89
TraesCS2D01G104800.1 Wheat extracellular 41.73 43.7
TraesCSU01G009600.1 Wheat extracellular 41.35 43.48
TraesCS2A01G580200.1 Wheat extracellular 40.98 43.43
TraesCS2A01G580300.1 Wheat extracellular 40.6 43.37
TraesCS2D01G592900.1 Wheat extracellular 40.6 43.37
TraesCS2A01G080800.1 Wheat extracellular 41.35 43.31
TraesCS2B01G607400.1 Wheat extracellular 40.23 42.97
EES07509 Sorghum extracellular 42.48 42.8
TraesCS2A01G105200.1 Wheat extracellular 40.6 42.52
TraesCS2D01G078800.1 Wheat extracellular 40.6 42.52
Zm00001d051368_P001 Maize extracellular 25.19 42.41
Zm00001d017493_P001 Maize extracellular 42.48 42.32
HORVU0Hr1G016380.2 Barley extracellular 42.11 42.26
TraesCS6A01G249700.1 Wheat extracellular 42.11 42.11
TraesCS2B01G095700.1 Wheat extracellular 39.85 42.06
Solyc10g018500.1.1 Tomato extracellular 41.73 41.89
TraesCS2D01G078600.1 Wheat extracellular 37.59 41.84
TraesCS6D01G231400.1 Wheat extracellular 41.73 41.73
Os04t0552000-00 Rice extracellular 41.35 41.67
TraesCS2B01G432300.1 Wheat plastid 40.98 41.6
TraesCS6A01G249400.2 Wheat extracellular 41.35 41.51
EES11234 Sorghum extracellular 40.98 41.44
Os02t0658600-00 Rice plastid 42.48 41.39
Zm00001d045861_P001 Maize mitochondrion 40.98 41.13
KXG19818 Sorghum extracellular 39.85 40.93
EER88254 Sorghum extracellular 39.85 40.93
TraesCS2A01G413600.1 Wheat extracellular 40.23 40.84
PGSC0003DMT400030395 Potato cytosol, extracellular, mitochondrion, nucleus 19.92 40.77
Solyc01g090820.1.1 Tomato extracellular 39.1 40.47
TraesCS2D01G411000.1 Wheat extracellular 39.85 40.46
Zm00001d026170_P001 Maize extracellular 39.85 40.46
Zm00001d045792_P001 Maize extracellular 40.98 40.37
Os05t0246300-01 Rice extracellular 39.47 39.77
Solyc05g052330.1.1 Tomato extracellular 39.47 39.18
Bra004889.1-P Field mustard extracellular 40.23 38.91
TraesCS2B01G122100.1 Wheat extracellular 27.82 38.74
Bra026272.1-P Field mustard extracellular 38.35 38.49
HORVU2Hr1G097480.1 Barley extracellular 40.23 37.81
Bra024215.1-P Field mustard extracellular 37.22 37.36
GSMUA_AchrUn_... Banana extracellular 24.81 36.67
HORVU2Hr1G013340.1 Barley extracellular 39.85 36.3
Solyc07g049540.1.1 Tomato extracellular 34.21 35.41
PGSC0003DMT400095086 Potato plastid 32.71 34.8
Bra036499.1-P Field mustard extracellular 33.83 33.96
TraesCS5B01G376500.1 Wheat extracellular 38.72 33.33
TraesCS5D01G384200.1 Wheat extracellular 38.35 33.12
Bra004890.1-P Field mustard extracellular 38.72 32.39
Os03t0645000-00 Rice mitochondrion 36.84 31.31
EER93754 Sorghum extracellular 34.21 29.74
KXG37946 Sorghum extracellular 35.71 29.23
Bra033563.1-P Field mustard extracellular 24.81 25.0
HORVU5Hr1G092910.9 Barley plastid 38.72 24.88
Bra011899.1-P Field mustard extracellular 24.81 24.54
Bra012684.1-P Field mustard extracellular 22.93 24.4
Bra040107.1-P Field mustard extracellular 22.93 24.4
Bra012687.1-P Field mustard extracellular 22.56 24.0
Zm00001d033231_P003 Maize extracellular 33.46 12.46
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1EnsemblPlantsGene:Bra003421EnsemblPlants:Bra003421.1EnsemblPlants:Bra003421.1-P
InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sfGO:GO:0000003GO:GO:0005575
GO:GO:0005576GO:GO:0008150GO:GO:0019953InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749
InterPro:IPR036908InterPro:LolPIUniProt:M4CGT8PFAM:PF01357PFAM:PF03330PRINTS:PR00829
PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF3InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sfSUPFAM:SSF49590SUPFAM:SSF50685SignalP:SignalP-noTMUniParc:UPI00025417F0SEG:seg
Description
AT2G45110 (E=1e-070) ATEXPB4, EXPB4, ATHEXP BETA 1.1 | ATEXPB4 (ARABIDOPSIS THALIANA EXPANSIN B4)
Coordinates
chrA07:+:13130735..13131877
Molecular Weight (calculated)
28747.0 Da
IEP (calculated)
9.630
GRAVY (calculated)
-0.159
Length
266 amino acids
Sequence
(BLAST)
001: MALFSGKYFC FIVALFAISL KPCSCHNNTR WNSAGITWYG DREGPGTTGG ACGFGDAVAK HPYQCMVSAG GPSLFKDGTG CGACYRLVCD HPLCTKKPIK
101: VMIADECAGC TKEAFHFDLS GKAFGALAKR GKGDELRNLG ELKVRYKRAC CKHPKSKIAI HVDAGANPYY MSFAVKFANG DGNFACVEIQ PAGGKYLKME
201: EMRSAVWKLN PGCALKGPFN VRLTSAVTKK VIVAKAVIPE NWSPGAIYHS LVNFATPKKD SHKKNK
Best Arabidopsis Sequence Match ( AT3G60570.1 )
(BLAST)
001: MASSSLKCFS FIVVLTTFFA ISLKPCYCHN KTHWNTAGIT WYGDREGPGT TGGACGYGDA VAKHPYRCMV SAGGPSLFKD GKGCGACYRL KCDHPLCTKK
101: PIKVMISDEC PGCTKESVHF DLSGKAFGAL AKRGKGDQLR NLGELKVSYK RACCKHPKTM IAIHVDAGAN PYYMSFAVKF ANGDGNFACI EVQPAGGQYM
201: KMEEMRSAVW RLSPGVPLKG PFNIRLTSAV SGKKIIAKGV IPEKWSPGAI YHSKVNFPVQ RKQK
Arabidopsis Description
EXPB5Expansin-B5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M203]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.