Factsheet for Solyc10g018500.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	48.3	54.01
CDY18950	Canola	cytosol, extracellular, plastid	47.17	52.74
TraesCS2B01G095600.1	Wheat	extracellular	50.57	52.55
CDY72345	Canola	cytosol	48.3	52.46
TraesCS2D01G078900.1	Wheat	extracellular	50.19	52.36
HORVU2Hr1G013360.1	Barley	extracellular	49.43	52.19
AT1G65681.1	Thale cress	cytosol	43.77	52.02
TraesCS2A01G081200.1	Wheat	extracellular	49.81	51.97
Solyc01g090820.1.1	Tomato	extracellular	49.81	51.36
AT2G45110.1	Thale cress	extracellular	50.19	51.35
TraesCS2A01G080800.1	Wheat	extracellular	49.06	51.18
Zm00001d026170_P001	Maize	extracellular	50.19	50.76
TraesCS2A01G413600.1	Wheat	extracellular	50.19	50.76
TraesCS2D01G592900.1	Wheat	extracellular	47.55	50.6
TraesCS2A01G580300.1	Wheat	extracellular	47.55	50.6
TraesCS2A01G580200.1	Wheat	extracellular	47.92	50.6
CDX74711	Canola	extracellular	49.81	50.57
TraesCS2D01G411000.1	Wheat	extracellular	49.81	50.38
Os04t0552000-00	Rice	extracellular	50.19	50.38
EES11234	Sorghum	extracellular	49.43	49.81
GSMUA_Achr2P13750_001	Banana	extracellular	49.06	49.81
TraesCSU01G009600.1	Wheat	extracellular	47.55	49.8
Os05t0246300-01	Rice	extracellular	49.43	49.62
TraesCS2B01G432300.1	Wheat	plastid	49.06	49.62
GSMUA_Achr2P13730_001	Banana	extracellular	49.06	49.62
TraesCS2B01G607400.1	Wheat	extracellular	46.42	49.4
TraesCS2D01G078600.1	Wheat	extracellular	44.53	49.37
Zm00001d051368_P001	Maize	extracellular	29.43	49.37
GSMUA_Achr2P13740_001	Banana	extracellular	48.68	49.24
Solyc01g090810.2.1	Tomato	extracellular	50.94	49.09
Zm00001d017493_P001	Maize	extracellular	49.43	49.06
CDY18946	Canola	extracellular	49.06	48.87
TraesCS2D01G078800.1	Wheat	extracellular	46.79	48.82
TraesCS2B01G095700.1	Wheat	extracellular	46.42	48.81
Zm00001d045861_P001	Maize	mitochondrion	48.68	48.68
KXG19818	Sorghum	extracellular	47.55	48.65
EES07509	Sorghum	extracellular	48.3	48.48
EER88254	Sorghum	extracellular	47.17	48.26
Zm00001d045792_P001	Maize	extracellular	48.68	47.78
Solyc05g052330.1.1	Tomato	extracellular	48.3	47.76
CDY72505	Canola	cytosol	28.68	47.5
CDX83404	Canola	extracellular	46.42	47.49
Bra000370.1-P	Field mustard	extracellular	46.42	47.49
Solyc07g049540.1.1	Tomato	extracellular	46.04	47.47
TraesCS6A01G249700.1	Wheat	extracellular	47.55	47.37
CDY72655	Canola	cytosol, plastid	30.19	47.34
TraesCS2D01G104800.1	Wheat	extracellular	45.28	47.24
HORVU0Hr1G016380.2	Barley	extracellular	47.17	47.17
CDX96901	Canola	extracellular	47.17	47.17
TraesCS6D01G231400.1	Wheat	extracellular	47.17	46.99
TraesCS6A01G249400.2	Wheat	extracellular	46.79	46.79
Bra035987.1-P	Field mustard	extracellular	46.79	46.79
CDY14888	Canola	extracellular	46.79	46.79
HORVU2Hr1G097480.1	Barley	extracellular	49.43	46.29
TraesCS2A01G105200.1	Wheat	extracellular	43.77	45.67
TraesCS2B01G122100.1	Wheat	extracellular	32.83	45.55
Os02t0658600-00	Rice	plastid	46.04	44.69
Solyc03g093390.2.1	Tomato	extracellular, nucleus	47.92	44.56
CDX95627	Canola	extracellular	44.91	42.65
AT3G60570.1	Thale cress	extracellular	42.26	42.42
HORVU2Hr1G013340.1	Barley	extracellular	46.42	42.12
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	21.89	42.03
Solyc07g054170.2.1	Tomato	extracellular	42.26	41.95
Bra003421.1-P	Field mustard	extracellular	41.89	41.73
CDX67835	Canola	extracellular	41.89	41.73
CDY71186	Canola	extracellular	42.26	41.33
GSMUA_AchrUn_...	Banana	extracellular	27.92	41.11
TraesCS5D01G384200.1	Wheat	extracellular	47.17	40.58
TraesCS5B01G376500.1	Wheat	extracellular	47.17	40.45
Solyc10g008440.2.1	Tomato	extracellular	39.25	39.69
KXG37946	Sorghum	extracellular	46.42	37.85
EER93754	Sorghum	extracellular	43.4	37.58
Os03t0645000-00	Rice	mitochondrion	42.64	36.1
Solyc08g077910.2.1	Tomato	extracellular	29.43	31.08
CDY48362	Canola	extracellular	41.51	30.81
Solyc08g077330.2.1	Tomato	extracellular	29.43	30.59
Bra014484.1-P	Field mustard	extracellular	41.51	30.56
HORVU5Hr1G092910.9	Barley	plastid	46.79	29.95
Solyc06g060970.1.1	Tomato	extracellular	26.42	28.23
Solyc08g077900.2.1	Tomato	extracellular	26.04	27.27
Solyc01g112000.2.1	Tomato	extracellular	26.04	26.44
Zm00001d033231_P003	Maize	extracellular	43.4	16.11

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0019953	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
UniProt:K4CYX4	InterPro:LolPI	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF3	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc10g018500.1	EnsemblPlants:Solyc10g018500.1.1
TMHMM:TMhelix	UniParc:UPI000276C795	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:-:8468478..8470332

Molecular Weight (calculated)

28261.6 Da

IEP (calculated)

4.956

GRAVY (calculated)

0.031

Length

265 amino acids

Sequence
(BLAST)

001: MSNPPLAHSF YLFTILTIFT LSIFSCSIVA ETDPFSPAVA TWYGDSAGAG SDGGACGYGN DVKNPPFSAM VSAGNGNIFK GGKGCGACYQ VMCKEKSACS
101: EIPITVTITD ECPGSCGNYG APFHFDLSGT AFGALAKPGQ ADLLRGDGII NIGYKRVACN YPQTTLTFKM DQGSNPSYFS CVIEFENGEG DLGLVELQSS
201: TGLVNKWPPM QHSWGANWKI ELPPQIKPPF SIRLTTLDSN KILVANNVIP LDWAPGLIYH SLVNF

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.