Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72655 | Canola | cytosol, plastid | 95.62 | 90.53 |
| CDX96901 | Canola | extracellular | 99.38 | 60.0 |
| Bra035987.1-P | Field mustard | extracellular | 96.88 | 58.49 |
| CDY14888 | Canola | extracellular | 96.88 | 58.49 |
| AT1G65681.1 | Thale cress | cytosol | 75.62 | 54.26 |
| CDX83404 | Canola | extracellular | 80.0 | 49.42 |
| CDY18950 | Canola | cytosol, extracellular, plastid | 73.12 | 49.37 |
| CDY72345 | Canola | cytosol | 73.75 | 48.36 |
| AT2G45110.1 | Thale cress | extracellular | 77.5 | 47.88 |
| CDX74711 | Canola | extracellular | 73.75 | 45.21 |
| CDY18946 | Canola | extracellular | 73.12 | 43.98 |
| CDX95627 | Canola | extracellular | 72.5 | 41.58 |
| PGSC0003DMT400030395 | Potato | cytosol, extracellular, mitochondrion, nucleus | 33.75 | 41.54 |
| TraesCS2B01G122100.1 | Wheat | extracellular | 46.88 | 39.27 |
| HORVU2Hr1G013380.1 | Barley | cytosol, extracellular, mitochondrion | 54.38 | 36.71 |
| TraesCS2B01G095600.1 | Wheat | extracellular | 56.25 | 35.29 |
| HORVU2Hr1G013360.1 | Barley | extracellular | 55.0 | 35.06 |
| CDX67835 | Canola | extracellular | 58.12 | 34.96 |
| TraesCS2D01G104800.1 | Wheat | extracellular | 55.0 | 34.65 |
| TraesCS2D01G078900.1 | Wheat | extracellular | 55.0 | 34.65 |
| TraesCS2A01G081200.1 | Wheat | extracellular | 55.0 | 34.65 |
| TraesCSU01G009600.1 | Wheat | extracellular | 54.38 | 34.39 |
| TraesCS2D01G078600.1 | Wheat | extracellular | 51.25 | 34.31 |
| TraesCS2A01G105200.1 | Wheat | extracellular | 54.38 | 34.25 |
| TraesCS2D01G592900.1 | Wheat | extracellular | 53.12 | 34.14 |
| TraesCS2B01G607400.1 | Wheat | extracellular | 52.5 | 33.73 |
| CDY71186 | Canola | extracellular | 56.88 | 33.58 |
| TraesCS2A01G580200.1 | Wheat | extracellular | 52.5 | 33.47 |
| TraesCS2A01G580300.1 | Wheat | extracellular | 51.88 | 33.33 |
| TraesCS2A01G080800.1 | Wheat | extracellular | 52.5 | 33.07 |
| TraesCS2D01G078800.1 | Wheat | extracellular | 52.5 | 33.07 |
| Os04t0552000-00 | Rice | extracellular | 54.38 | 32.95 |
| Zm00001d017493_P001 | Maize | extracellular | 53.75 | 32.21 |
| TraesCS2B01G095700.1 | Wheat | extracellular | 50.62 | 32.14 |
| Os05t0246300-01 | Rice | extracellular | 51.88 | 31.44 |
| EES07509 | Sorghum | extracellular | 51.88 | 31.44 |
| HORVU0Hr1G016380.2 | Barley | extracellular | 51.88 | 31.32 |
| TraesCS2B01G432300.1 | Wheat | plastid | 51.25 | 31.3 |
| TraesCS2A01G413600.1 | Wheat | extracellular | 51.25 | 31.3 |
| Os02t0658600-00 | Rice | plastid | 53.12 | 31.14 |
| TraesCS2D01G411000.1 | Wheat | extracellular | 50.62 | 30.92 |
| TraesCS6A01G249400.2 | Wheat | extracellular | 50.62 | 30.57 |
| Zm00001d026170_P001 | Maize | extracellular | 50.0 | 30.53 |
| TraesCS6A01G249700.1 | Wheat | extracellular | 50.62 | 30.45 |
| Zm00001d045861_P001 | Maize | mitochondrion | 50.0 | 30.19 |
| TraesCS6D01G231400.1 | Wheat | extracellular | 50.0 | 30.08 |
| EES11234 | Sorghum | extracellular | 49.38 | 30.04 |
| KXG19818 | Sorghum | extracellular | 48.12 | 29.73 |
| Zm00001d045792_P001 | Maize | extracellular | 50.0 | 29.63 |
| GSMUA_Achr2P13750_001 | Banana | extracellular | 48.12 | 29.5 |
| GSMUA_Achr2P13740_001 | Banana | extracellular | 48.12 | 29.39 |
| GSMUA_Achr2P13730_001 | Banana | extracellular | 48.12 | 29.39 |
| EER88254 | Sorghum | extracellular | 47.5 | 29.34 |
| HORVU2Hr1G097480.1 | Barley | extracellular | 51.25 | 28.98 |
| Solyc10g018500.1.1 | Tomato | extracellular | 47.5 | 28.68 |
| Solyc05g052330.1.1 | Tomato | extracellular | 47.5 | 28.36 |
| Solyc01g090820.1.1 | Tomato | extracellular | 44.38 | 27.63 |
| HORVU2Hr1G013340.1 | Barley | extracellular | 49.38 | 27.05 |
| CDY18951 | Canola | extracellular | 45.62 | 26.55 |
| PGSC0003DMT400095086 | Potato | plastid | 41.25 | 26.4 |
| CDY70406 | Canola | extracellular | 45.0 | 26.28 |
| CDX74710 | Canola | extracellular | 45.0 | 26.28 |
| Solyc07g049540.1.1 | Tomato | extracellular | 41.25 | 25.68 |
| CDY18948 | Canola | extracellular | 31.25 | 25.64 |
| Os03t0645000-00 | Rice | mitochondrion | 48.12 | 24.6 |
| TraesCS5B01G376500.1 | Wheat | extracellular | 47.5 | 24.6 |
| CDX90493 | Canola | cytosol, extracellular, nucleus | 20.0 | 24.43 |
| TraesCS5D01G384200.1 | Wheat | extracellular | 46.88 | 24.35 |
| CDY48362 | Canola | extracellular | 53.75 | 24.09 |
| CDY18990 | Canola | extracellular | 38.75 | 23.4 |
| EER93754 | Sorghum | extracellular | 43.12 | 22.55 |
| CDY58728 | Canola | extracellular | 36.88 | 22.26 |
| CDY05789 | Canola | extracellular | 36.88 | 22.26 |
| CDY70556 | Canola | extracellular | 36.88 | 22.26 |
| KXG37946 | Sorghum | extracellular | 45.0 | 22.15 |
| Zm00001d051368_P001 | Maize | extracellular | 21.88 | 22.15 |
| CDY31940 | Canola | extracellular | 36.25 | 21.89 |
| GSMUA_AchrUn_... | Banana | extracellular | 23.12 | 20.56 |
| CDX74713 | Canola | extracellular | 41.88 | 19.53 |
| HORVU5Hr1G092910.9 | Barley | plastid | 47.5 | 18.36 |
| CDY09659 | Canola | plasma membrane | 25.62 | 16.4 |
| CDY65447 | Canola | extracellular | 25.62 | 16.4 |
| CDY42954 | Canola | extracellular | 24.38 | 15.6 |
| CDY52801 | Canola | extracellular | 25.62 | 15.24 |
| CDY35606 | Canola | extracellular | 23.75 | 15.2 |
| CDY61895 | Canola | extracellular | 25.0 | 14.87 |
| CDY69288 | Canola | extracellular | 23.75 | 14.39 |
| CDY72634 | Canola | extracellular | 23.75 | 14.34 |
| CDY64278 | Canola | extracellular | 23.75 | 14.34 |
| Zm00001d033231_P003 | Maize | extracellular | 43.75 | 9.8 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | GO:A0A078K193 | UniProt:A0A078K193 | EnsemblPlants:CDY72505 |
| ProteinID:CDY72505 | ProteinID:CDY72505.1 | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 | EnsemblPlantsGene:GSBRNA2T00030197001 | InterPro:IPR007112 |
| InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 | PFAM:PF03330 |
| PRINTS:PR00829 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF3 | InterPro:RlpA-like_DPBB |
| InterPro:RlpA-like_sf | SUPFAM:SSF49590 | SUPFAM:SSF50685 | UniParc:UPI0004EF4264 | SEG:seg | : |
Description
BnaCnng78020DBnaCnng78020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K193]
Coordinates
chrLK051448:+:913..1592
Molecular Weight (calculated)
17457.8 Da
IEP (calculated)
6.783
GRAVY (calculated)
-0.058
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPIRVTITD ECPGGPCASE PAHFDLSGKA IGALARHGQA DQLRAAGVLR VVYRRYSSYR WSTIALHIDA GANPYYIAFV VEYENGDGDL ASVEIQPAGG
101: SFIPMQEMRS AVWKLNSGSA LIGPFNIRLT SGETDKVIVA QAVIPVNWRA DETYRSIVNF
101: SFIPMQEMRS AVWKLNSGSA LIGPFNIRLT SGETDKVIVA QAVIPVNWRA DETYRSIVNF
001: MIGELDFPFL GAGSTGGACG FAVANPPLYG MVSAGGPSVF NNGIGCGTCF QILCNGHPAC SRRPITVTIT DECPGGPCAS EPAHFDLSGK AMGALARPGQ
101: GDRLRSAGVL RVYYRRVECL YRRTNIAFRM DPGANPYYIS FVVEYENGDG DLAYIEIQPA DGEFIPMQEM RSAVWKISSG SPLTGPFNIR LTSAESHKVV
201: LAYNVIPANW KPNETYRSVV NFK
101: GDRLRSAGVL RVYYRRVECL YRRTNIAFRM DPGANPYYIS FVVEYENGDG DLAYIEIQPA DGEFIPMQEM RSAVWKISSG SPLTGPFNIR LTSAESHKVV
201: LAYNVIPANW KPNETYRSVV NFK
Arabidopsis Description
EXPB6Expansin-B6 [Source:UniProtKB/Swiss-Prot;Acc:F4IBJ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.