Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G078900.1 | Wheat | extracellular | 95.67 | 95.67 |
| TraesCS2A01G080800.1 | Wheat | extracellular | 94.88 | 94.88 |
| TraesCS2B01G095600.1 | Wheat | extracellular | 88.98 | 88.63 |
| TraesCS2A01G580300.1 | Wheat | extracellular | 77.95 | 79.52 |
| TraesCS2A01G580200.1 | Wheat | extracellular | 77.95 | 78.88 |
| TraesCS2A01G105200.1 | Wheat | extracellular | 76.77 | 76.77 |
| Os02t0658600-00 | Rice | plastid | 71.26 | 66.3 |
| Zm00001d017493_P001 | Maize | extracellular | 69.69 | 66.29 |
| Zm00001d045861_P001 | Maize | mitochondrion | 68.9 | 66.04 |
| KXG19818 | Sorghum | extracellular | 66.93 | 65.64 |
| EER88254 | Sorghum | extracellular | 66.54 | 65.25 |
| Zm00001d045792_P001 | Maize | extracellular | 68.9 | 64.81 |
| EES07509 | Sorghum | extracellular | 66.93 | 64.39 |
| TraesCS2A01G413600.1 | Wheat | extracellular | 65.75 | 63.74 |
| TraesCS6A01G249700.1 | Wheat | extracellular | 66.14 | 63.16 |
| TraesCS6A01G249400.2 | Wheat | extracellular | 65.35 | 62.64 |
| Zm00001d051368_P001 | Maize | extracellular | 37.8 | 60.76 |
| GSMUA_AchrUn_... | Banana | extracellular | 61.42 | 59.09 |
| VIT_15s0021g02670.t01 | Wine grape | extracellular | 62.99 | 58.61 |
| VIT_15s0021g02700.t01 | Wine grape | extracellular | 62.2 | 57.88 |
| TraesCS2A01G413400.1 | Wheat | extracellular | 57.48 | 55.94 |
| CDY18950 | Canola | cytosol, extracellular, plastid | 51.97 | 55.7 |
| Solyc01g090810.2.1 | Tomato | extracellular | 59.84 | 55.27 |
| CDY72655 | Canola | cytosol, plastid | 36.61 | 55.03 |
| CDY72505 | Canola | cytosol | 34.65 | 55.0 |
| CDY72345 | Canola | cytosol | 52.36 | 54.51 |
| GSMUA_Achr4P26910_001 | Banana | extracellular | 57.87 | 54.04 |
| KRH33426 | Soybean | extracellular | 57.48 | 53.68 |
| AT2G45110.1 | Thale cress | extracellular | 54.72 | 53.67 |
| PGSC0003DMT400048506 | Potato | plastid | 40.94 | 53.61 |
| Bra000370.1-P | Field mustard | extracellular | 53.94 | 52.9 |
| CDX83404 | Canola | extracellular | 53.94 | 52.9 |
| CDX74711 | Canola | extracellular | 54.33 | 52.87 |
| CDY14888 | Canola | extracellular | 55.12 | 52.83 |
| Bra035987.1-P | Field mustard | extracellular | 55.12 | 52.83 |
| CDX96901 | Canola | extracellular | 55.12 | 52.83 |
| AT1G65681.1 | Thale cress | cytosol | 46.06 | 52.47 |
| TraesCS5A01G537300.1 | Wheat | cytosol, extracellular, plastid | 33.07 | 52.17 |
| KRG88934 | Soybean | extracellular, vacuole | 56.69 | 51.99 |
| TraesCS2A01G413500.1 | Wheat | extracellular, plastid | 57.48 | 51.96 |
| TraesCS6A01G249200.1 | Wheat | extracellular | 58.27 | 51.57 |
| KRH75302 | Soybean | extracellular | 55.91 | 51.26 |
| CDY18946 | Canola | extracellular | 53.54 | 51.13 |
| KRH33423 | Soybean | extracellular | 54.72 | 50.18 |
| AT1G65680.1 | Thale cress | extracellular | 53.54 | 49.82 |
| KRH65410 | Soybean | extracellular | 52.36 | 49.81 |
| Solyc10g018500.1.1 | Tomato | extracellular | 51.97 | 49.81 |
| PGSC0003DMT400030395 | Potato | cytosol, extracellular, mitochondrion, nucleus | 25.2 | 49.23 |
| VIT_09s0002g08510.t01 | Wine grape | extracellular | 53.94 | 49.1 |
| Solyc01g090820.1.1 | Tomato | extracellular | 48.82 | 48.25 |
| CDY18948 | Canola | extracellular | 37.01 | 48.21 |
| TraesCS6A01G249300.1 | Wheat | extracellular | 54.72 | 48.1 |
| CDY18951 | Canola | extracellular | 51.97 | 48.0 |
| CDY70406 | Canola | extracellular | 51.57 | 47.81 |
| CDX74710 | Canola | extracellular | 51.18 | 47.45 |
| Bra004889.1-P | Field mustard | extracellular | 51.18 | 47.27 |
| TraesCS1A01G212000.1 | Wheat | extracellular | 50.0 | 47.04 |
| TraesCS1A01G212400.1 | Wheat | extracellular | 48.43 | 46.42 |
| TraesCS3A01G488000.1 | Wheat | extracellular | 52.76 | 46.37 |
| Solyc03g093390.2.1 | Tomato | extracellular, nucleus | 51.97 | 46.32 |
| TraesCS3A01G011200.1 | Wheat | cytosol | 29.13 | 46.25 |
| Solyc05g052330.1.1 | Tomato | extracellular | 48.43 | 45.9 |
| Bra004891.1-P | Field mustard | cytosol, nucleus, plastid | 24.8 | 45.65 |
| TraesCS1A01G212300.1 | Wheat | extracellular | 49.21 | 45.62 |
| TraesCS6A01G032700.1 | Wheat | extracellular | 48.82 | 45.42 |
| TraesCS3A01G011100.1 | Wheat | extracellular | 48.43 | 44.89 |
| CDX95627 | Canola | extracellular | 48.82 | 44.44 |
| Solyc07g049540.1.1 | Tomato | extracellular | 44.88 | 44.36 |
| PGSC0003DMT400095086 | Potato | plastid | 42.91 | 43.6 |
| AT3G60570.1 | Thale cress | extracellular | 45.28 | 43.56 |
| Bra003421.1-P | Field mustard | extracellular | 44.88 | 42.86 |
| CDX67835 | Canola | extracellular | 44.88 | 42.86 |
| CDY71186 | Canola | extracellular | 45.67 | 42.8 |
| TraesCS1A01G208200.1 | Wheat | extracellular | 44.09 | 42.26 |
| TraesCS6A01G217100.1 | Wheat | extracellular | 49.21 | 42.09 |
| TraesCS1A01G212200.1 | Wheat | extracellular | 44.49 | 41.7 |
| TraesCS1A01G212600.1 | Wheat | extracellular | 45.28 | 41.37 |
| TraesCS2A01G458900.1 | Wheat | extracellular | 42.91 | 41.13 |
| TraesCS5A01G538000.1 | Wheat | extracellular | 45.67 | 40.85 |
| TraesCS3A01G480000.1 | Wheat | extracellular | 50.79 | 40.19 |
| TraesCS6A01G235800.1 | Wheat | extracellular | 42.13 | 40.07 |
| TraesCS3A01G479900.1 | Wheat | extracellular | 49.61 | 39.5 |
| Bra004890.1-P | Field mustard | extracellular | 48.82 | 38.99 |
| TraesCS5A01G530100.1 | Wheat | extracellular | 40.55 | 38.15 |
| TraesCS2A01G373000.1 | Wheat | extracellular | 42.13 | 38.08 |
| TraesCS5A01G530700.1 | Wheat | extracellular | 40.16 | 37.78 |
| CDX74713 | Canola | extracellular | 49.21 | 36.44 |
| TraesCS5A01G073100.1 | Wheat | extracellular, plasma membrane | 48.82 | 36.26 |
| CDY48362 | Canola | extracellular | 46.06 | 32.77 |
| Bra014484.1-P | Field mustard | extracellular | 46.06 | 32.5 |
| TraesCS5A01G498900.1 | Wheat | extracellular | 31.5 | 29.09 |
| PGSC0003DMT400066943 | Potato | cytosol, plastid, vacuole | 51.57 | 28.54 |
| TraesCS5A01G499300.1 | Wheat | nucleus | 29.92 | 27.84 |
| TraesCS5A01G499100.1 | Wheat | extracellular | 25.98 | 26.4 |
| TraesCS5A01G499200.1 | Wheat | extracellular | 27.17 | 26.24 |
| TraesCS1A01G203200.1 | Wheat | extracellular | 27.56 | 24.82 |
| TraesCS7A01G545900.1 | Wheat | extracellular | 26.77 | 22.01 |
| TraesCS7A01G545800.1 | Wheat | extracellular | 25.98 | 21.93 |
| TraesCS7A01G546000.1 | Wheat | endoplasmic reticulum, extracellular | 26.77 | 21.05 |
| TraesCS7A01G546300.1 | Wheat | endoplasmic reticulum, extracellular | 25.98 | 20.56 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 |
| PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 |
| PANTHER:PTHR31692:SF27 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS2A01G081200 | EnsemblPlants:TraesCS2A01G081200.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2A:-:36718285..36719239
Molecular Weight (calculated)
26491.1 Da
IEP (calculated)
7.981
GRAVY (calculated)
-0.145
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSFVAFV ALASSCLLIL HSRSVSGWSD GGATWYGPRH GAGSDGGACG YQGDVEKPPF SAMITAGGPS IFNGGKGCGA CYQVRYIGNS ACSGSPATVV
101: VTDQCPGGPC QAEAAHFDLS GKAFGAMAKP GQDDNLRNVG KLRIQYNRVP CNWHGLDIAF KVDAGSNPNY LAVLIEDEAG DGDLSAVELQ QRGGSWAPMQ
201: ESWGAVWKYN AGSTLQAPIS FRLTSGSGKK LVARNVIPAG WQAGKTYRSI VNFQ
101: VTDQCPGGPC QAEAAHFDLS GKAFGAMAKP GQDDNLRNVG KLRIQYNRVP CNWHGLDIAF KVDAGSNPNY LAVLIEDEAG DGDLSAVELQ QRGGSWAPMQ
201: ESWGAVWKYN AGSTLQAPIS FRLTSGSGKK LVARNVIPAG WQAGKTYRSI VNFQ
001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF
Arabidopsis Description
EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.