Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G011200.1 | Wheat | cytosol | 62.11 | 62.5 |
| Os03t0102700-01 | Rice | plastid | 88.82 | 51.25 |
| TraesCS4D01G361700.1 | Wheat | extracellular | 100.0 | 50.95 |
| TraesCS3A01G011100.1 | Wheat | extracellular | 83.85 | 49.27 |
| TraesCS4B01G375600.1 | Wheat | extracellular | 100.0 | 47.21 |
| TraesCS6A01G217100.1 | Wheat | extracellular | 85.71 | 46.46 |
| TraesCS1A01G212400.1 | Wheat | extracellular | 73.29 | 44.53 |
| TraesCS6A01G032700.1 | Wheat | extracellular | 73.29 | 43.22 |
| KXG40416 | Sorghum | extracellular, vacuole | 85.71 | 43.12 |
| TraesCS1A01G212300.1 | Wheat | extracellular | 72.67 | 42.7 |
| TraesCS3A01G480000.1 | Wheat | extracellular | 85.09 | 42.68 |
| Zm00001d027283_P001 | Maize | extracellular | 83.85 | 42.45 |
| TraesCS3A01G479900.1 | Wheat | extracellular | 83.23 | 42.01 |
| TraesCS1A01G212000.1 | Wheat | extracellular | 70.19 | 41.85 |
| TraesCS5A01G538000.1 | Wheat | extracellular | 73.29 | 41.55 |
| TraesCS1A01G212600.1 | Wheat | extracellular | 69.57 | 40.29 |
| HORVU4Hr1G088080.4 | Barley | plastid | 99.38 | 39.7 |
| TraesCS5A01G073100.1 | Wheat | extracellular, plasma membrane | 82.61 | 38.89 |
| TraesCS1A01G212200.1 | Wheat | extracellular | 65.22 | 38.75 |
| TraesCS1A01G208200.1 | Wheat | extracellular | 56.52 | 34.34 |
| TraesCS2A01G580300.1 | Wheat | extracellular | 51.55 | 33.33 |
| TraesCS2A01G458900.1 | Wheat | extracellular | 54.66 | 33.21 |
| TraesCS2A01G081200.1 | Wheat | extracellular | 52.17 | 33.07 |
| GSMUA_AchrUn_... | Banana | extracellular | 18.63 | 32.61 |
| TraesCS6A01G249700.1 | Wheat | extracellular | 53.42 | 32.33 |
| TraesCS2A01G080800.1 | Wheat | extracellular | 50.93 | 32.28 |
| TraesCS2A01G580200.1 | Wheat | extracellular | 50.31 | 32.27 |
| TraesCS2A01G413400.1 | Wheat | extracellular | 52.17 | 32.18 |
| TraesCS6A01G249400.2 | Wheat | extracellular | 52.8 | 32.08 |
| TraesCS2A01G413600.1 | Wheat | extracellular | 51.55 | 31.68 |
| TraesCS2A01G105200.1 | Wheat | extracellular | 49.69 | 31.5 |
| TraesCS5A01G530100.1 | Wheat | extracellular | 52.17 | 31.11 |
| TraesCS5A01G530700.1 | Wheat | extracellular | 52.17 | 31.11 |
| TraesCS6A01G249200.1 | Wheat | extracellular | 52.17 | 29.27 |
| TraesCS2A01G413500.1 | Wheat | extracellular, plastid | 49.07 | 28.11 |
| TraesCS6A01G249300.1 | Wheat | extracellular | 49.69 | 27.68 |
| TraesCS6A01G235800.1 | Wheat | extracellular | 45.34 | 27.34 |
| TraesCS3A01G488000.1 | Wheat | extracellular | 47.83 | 26.64 |
| TraesCS2A01G373000.1 | Wheat | extracellular | 44.72 | 25.62 |
| TraesCS5A01G499100.1 | Wheat | extracellular | 31.06 | 20.0 |
| TraesCS5A01G499300.1 | Wheat | nucleus | 31.68 | 18.68 |
| TraesCS5A01G498900.1 | Wheat | extracellular | 31.68 | 18.55 |
| TraesCS5A01G499200.1 | Wheat | extracellular | 29.81 | 18.25 |
| TraesCS1A01G203200.1 | Wheat | extracellular | 29.81 | 17.02 |
| TraesCS7A01G545900.1 | Wheat | extracellular | 29.19 | 15.21 |
| TraesCS7A01G545800.1 | Wheat | extracellular | 26.71 | 14.29 |
| TraesCS7A01G546000.1 | Wheat | endoplasmic reticulum, extracellular | 28.57 | 14.24 |
| TraesCS7A01G546300.1 | Wheat | endoplasmic reticulum, extracellular | 27.95 | 14.02 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 |
| PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 |
| PANTHER:PTHR31692:SF23 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
| EnsemblPlantsGene:TraesCS5A01G537300 | EnsemblPlants:TraesCS5A01G537300.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:693673421..693674644
Molecular Weight (calculated)
17763.9 Da
IEP (calculated)
4.593
GRAVY (calculated)
-0.266
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSCGNEPLF KDGKGCGSCY QIRCVSAGHP ACSGVPETVI ITDMNYYPVS RFHFDLSGTA FGAMAKDGRN DELRHAGIID MQFRRVPCQY PGLTVTFHVQ
101: HGSNPYYLAI LVEYENGDGD VDQGPFSLRI TNESGKTLVA DQVIPADWEP NEIYSSIIQF D
101: HGSNPYYLAI LVEYENGDGD VDQGPFSLRI TNESGKTLVA DQVIPADWEP NEIYSSIIQF D
001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF
Arabidopsis Description
EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.