Factsheet for TraesCS3A01G011200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G000400.1	Wheat	cytosol	96.25	75.86
TraesCS5A01G537300.1	Wheat	cytosol, extracellular, plastid	62.5	62.11
TraesCS3B01G014400.1	Wheat	cytosol	88.12	56.85
TraesCS3A01G011100.1	Wheat	extracellular	81.25	47.45
Os03t0102700-01	Rice	plastid	75.62	43.37
TraesCS6A01G217100.1	Wheat	extracellular	75.0	40.4
GSMUA_AchrUn_...	Banana	extracellular	23.12	40.22
TraesCS1A01G212300.1	Wheat	extracellular	65.62	38.32
TraesCS1A01G212400.1	Wheat	extracellular	63.12	38.11
TraesCS6A01G032700.1	Wheat	extracellular	64.38	37.73
TraesCS5A01G538000.1	Wheat	extracellular	65.62	36.97
KXG40416	Sorghum	extracellular, vacuole	73.75	36.88
Zm00001d027283_P001	Maize	extracellular	73.12	36.79
TraesCS1A01G212000.1	Wheat	extracellular	60.0	35.56
TraesCS3A01G480000.1	Wheat	extracellular	71.25	35.51
TraesCS3A01G479900.1	Wheat	extracellular	69.38	34.8
TraesCS1A01G212200.1	Wheat	extracellular	58.75	34.69
TraesCS1A01G212600.1	Wheat	extracellular	58.75	33.81
TraesCS5A01G073100.1	Wheat	extracellular, plasma membrane	68.75	32.16
TraesCS1A01G208200.1	Wheat	extracellular	50.0	30.19
TraesCS2A01G081200.1	Wheat	extracellular	46.25	29.13
TraesCS2A01G580300.1	Wheat	extracellular	45.0	28.92
TraesCS2A01G580200.1	Wheat	extracellular	45.0	28.69
TraesCS6A01G249700.1	Wheat	extracellular	47.5	28.57
TraesCS2A01G413400.1	Wheat	extracellular	46.25	28.35
TraesCS6A01G249400.2	Wheat	extracellular	46.88	28.3
TraesCS2A01G458900.1	Wheat	extracellular	46.88	28.3
TraesCS2A01G413600.1	Wheat	extracellular	46.25	28.24
TraesCS2A01G080800.1	Wheat	extracellular	43.75	27.56
TraesCS5A01G530100.1	Wheat	extracellular	44.38	26.3
TraesCS5A01G530700.1	Wheat	extracellular	44.38	26.3
TraesCS2A01G105200.1	Wheat	extracellular	40.62	25.59
TraesCS6A01G249300.1	Wheat	extracellular	44.38	24.57
TraesCS3A01G488000.1	Wheat	extracellular	43.12	23.88
TraesCS6A01G249200.1	Wheat	extracellular	41.88	23.34
TraesCS2A01G413500.1	Wheat	extracellular, plastid	40.62	23.13
TraesCS6A01G235800.1	Wheat	extracellular	37.5	22.47
TraesCS2A01G373000.1	Wheat	extracellular	36.25	20.64
TraesCS5A01G499100.1	Wheat	extracellular	25.0	16.0
TraesCS5A01G499300.1	Wheat	nucleus	26.25	15.38
TraesCS5A01G498900.1	Wheat	extracellular	25.0	14.55
TraesCS5A01G499200.1	Wheat	extracellular	23.75	14.45
TraesCS1A01G203200.1	Wheat	extracellular	23.12	13.12
TraesCS7A01G545900.1	Wheat	extracellular	24.38	12.62
TraesCS7A01G546300.1	Wheat	endoplasmic reticulum, extracellular	25.0	12.46
TraesCS7A01G546000.1	Wheat	endoplasmic reticulum, extracellular	25.0	12.38
TraesCS7A01G545800.1	Wheat	extracellular	23.12	12.29

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF23
InterPro:RlpA-like_sf	SUPFAM:SSF49590	SUPFAM:SSF50685	EnsemblPlantsGene:TraesCS3A01G011200	EnsemblPlants:TraesCS3A01G011200.1	:

Description

No Description!

Coordinates

chr3A:+:9185502..9187065

Molecular Weight (calculated)

18131.8 Da

IEP (calculated)

5.241

GRAVY (calculated)

-0.302

Length

160 amino acids

Sequence
(BLAST)

001: MNYYPVFPYH FDLSGTAFGA MAKDGRNDEL RNAGIIDMQF RRVPCQYPGL AVMFHVEKGS NPFYMAILVE YENGDGDVKL LEIMESRPVA GNGGEMAPTG
101: EWVPMKESWG SIWRMDARHR MQGPFSLRIT NESGKMLVAD QVIPAVWKPE KVYSSVIQFD

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.