Factsheet for TraesCS2A01G413500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

plastid 3
extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G411100.1	Wheat	extracellular, plastid	97.86	97.86
TraesCS2B01G432200.1	Wheat	extracellular, plastid	97.51	97.51
HORVU2Hr1G097490.1	Barley	plastid	94.66	85.53
Zm00001d026171_P001	Maize	extracellular	50.18	72.31
EES11233	Sorghum	extracellular	65.84	64.24
Zm00001d026169_P001	Maize	extracellular	64.77	62.33
EES11235	Sorghum	extracellular	63.7	61.51
TraesCS2A01G413600.1	Wheat	extracellular	56.58	60.69
TraesCS6A01G249400.2	Wheat	extracellular	55.52	58.87
TraesCS2A01G413400.1	Wheat	extracellular	54.09	58.24
TraesCS6A01G249700.1	Wheat	extracellular	54.8	57.89
TraesCS2A01G580200.1	Wheat	extracellular	51.6	57.77
TraesCS2A01G081200.1	Wheat	extracellular	51.96	57.48
TraesCS2A01G080800.1	Wheat	extracellular	51.6	57.09
TraesCS2A01G580300.1	Wheat	extracellular	50.53	57.03
TraesCS6A01G249200.1	Wheat	extracellular	56.94	55.75
TraesCS2A01G105200.1	Wheat	extracellular	48.04	53.15
TraesCS6A01G249300.1	Wheat	extracellular	52.31	50.87
TraesCS3A01G488000.1	Wheat	extracellular	51.25	49.83
TraesCS5A01G537300.1	Wheat	cytosol, extracellular, plastid	28.11	49.07
TraesCS1A01G212000.1	Wheat	extracellular	41.99	43.7
TraesCS3A01G011100.1	Wheat	extracellular	42.35	43.43
TraesCS1A01G212400.1	Wheat	extracellular	40.57	43.02
TraesCS1A01G208200.1	Wheat	extracellular	39.86	42.26
TraesCS1A01G212300.1	Wheat	extracellular	40.93	41.97
TraesCS6A01G032700.1	Wheat	extracellular	40.57	41.76
TraesCS1A01G212200.1	Wheat	extracellular	39.5	40.96
TraesCS6A01G235800.1	Wheat	extracellular	38.79	40.82
TraesCS1A01G212600.1	Wheat	extracellular	40.21	40.65
TraesCS3A01G011200.1	Wheat	cytosol	23.13	40.62
TraesCS5A01G538000.1	Wheat	extracellular	40.93	40.49
TraesCS5A01G530100.1	Wheat	extracellular	37.72	39.26
TraesCS5A01G530700.1	Wheat	extracellular	37.72	39.26
TraesCS2A01G458900.1	Wheat	extracellular	37.01	39.25
TraesCS6A01G217100.1	Wheat	extracellular	39.86	37.71
TraesCS2A01G373000.1	Wheat	extracellular	37.01	37.01
TraesCS3A01G479900.1	Wheat	extracellular	41.99	36.99
TraesCS3A01G480000.1	Wheat	extracellular	40.57	35.51
TraesCS5A01G073100.1	Wheat	extracellular, plasma membrane	40.21	33.04
TraesCS5A01G498900.1	Wheat	extracellular	28.11	28.73
TraesCS5A01G499300.1	Wheat	nucleus	27.4	28.21
TraesCS5A01G499100.1	Wheat	extracellular	24.56	27.6
TraesCS5A01G499200.1	Wheat	extracellular	24.56	26.24
TraesCS1A01G203200.1	Wheat	extracellular	24.91	24.82
TraesCS7A01G545800.1	Wheat	extracellular	23.49	21.93
TraesCS7A01G545900.1	Wheat	extracellular	23.84	21.68
TraesCS7A01G546000.1	Wheat	endoplasmic reticulum, extracellular	23.49	20.43
TraesCS7A01G546300.1	Wheat	endoplasmic reticulum, extracellular	23.13	20.25

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF22	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2A01G413500	EnsemblPlants:TraesCS2A01G413500.1	SEG:seg	:

Description

No Description!

Coordinates

chr2A:-:670670656..670671755

Molecular Weight (calculated)

29499.9 Da

IEP (calculated)

9.081

GRAVY (calculated)

-0.125

Length

281 amino acids

Sequence
(BLAST)

001: MASPGTLLLA TVLVILSIFV SPISGYWKPS RTRTRRPSSR RSWSSGGATW YGSPYGAGSD GGACGYQRAV GQHPFSSMIA AGGPSFFKSG KGCGSCYQVK
101: CTGNKACSGR PVTVVIADNC PDGICASEDH FDMSGTAFGA MANRGMADRL RSAGQLKIHY ARVPCNYNGM NIVFKVDAGS NPFYLSVLIM YQAGDGDLSA
201: VDIMQGGCAP GHHNDHGAPW MAMTQSWGAL WLLQSNNGKP LQAPFSFRLT SGSGKVLEVT NAIPSGWSAG TSYSSSANYA S

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.