Factsheet for HORVU2Hr1G097490.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
extracellular 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	extracellular, plastid, vacuole
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
TargetP:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G411100.1	Wheat	extracellular, plastid	87.14	96.44
TraesCS2B01G432200.1	Wheat	extracellular, plastid	87.14	96.44
TraesCS2A01G413500.1	Wheat	extracellular, plastid	85.53	94.66
Zm00001d026171_P001	Maize	extracellular	45.34	72.31
EES11233	Sorghum	extracellular	59.49	64.24
Zm00001d026169_P001	Maize	extracellular	59.16	63.01
EES11235	Sorghum	extracellular	58.84	62.89
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	46.62	61.18
HORVU0Hr1G016410.1	Barley	extracellular	53.05	57.49
HORVU6Hr1G063180.1	Barley	extracellular	53.05	57.49
HORVU0Hr1G016380.2	Barley	extracellular	48.87	57.36
HORVU2Hr1G013360.1	Barley	extracellular	45.66	56.57
HORVU2Hr1G097480.1	Barley	extracellular	49.84	54.77
HORVU2Hr1G097510.1	Barley	extracellular, mitochondrion, plastid	48.55	54.32
HORVU0Hr1G018320.1	Barley	extracellular	48.55	52.25
HORVU2Hr1G013340.1	Barley	extracellular	43.41	46.23
HORVU3Hr1G073140.1	Barley	plastid	35.37	41.83
HORVU3Hr1G105170.1	Barley	plastid	35.37	41.83
HORVU6Hr1G055090.1	Barley	extracellular	36.01	41.79
HORVU3Hr1G076110.1	Barley	cytosol, extracellular	18.01	40.58
HORVU3Hr1G001920.2	Barley	extracellular	36.66	40.57
HORVU6Hr1G060410.7	Barley	extracellular	34.08	39.55
HORVU4Hr1G086830.1	Barley	extracellular	33.76	39.47
HORVU1Hr1G054210.1	Barley	extracellular	34.08	39.11
HORVU4Hr1G086930.1	Barley	extracellular	33.76	38.32
HORVU1Hr1G053300.1	Barley	extracellular	34.08	38.27
HORVU6Hr1G005760.1	Barley	extracellular	34.73	37.89
HORVU3Hr1G073120.1	Barley	extracellular	36.98	37.58
HORVU3Hr1G105180.1	Barley	extracellular	36.98	37.58
HORVU1Hr1G054240.2	Barley	plastid	37.94	37.22
HORVU4Hr1G087070.2	Barley	extracellular, mitochondrion, peroxisome	33.44	37.01
HORVU6Hr1G005810.3	Barley	extracellular	36.01	36.96
HORVU0Hr1G005490.1	Barley	extracellular	33.76	36.71
HORVU5Hr1G092910.9	Barley	plastid	46.95	35.27
HORVU3Hr1G105520.1	Barley	extracellular	36.33	32.75
HORVU5Hr1G019100.1	Barley	extracellular, plasma membrane	36.66	32.29
HORVU4Hr1G088080.4	Barley	plastid	36.66	28.29
HORVU4Hr1G081990.2	Barley	extracellular	25.4	28.21
HORVU4Hr1G081800.6	Barley	extracellular, golgi, plastid	25.4	26.42
HORVU1Hr1G052290.4	Barley	extracellular	23.47	26.35
HORVU4Hr1G088140.3	Barley	extracellular	27.01	26.09
HORVU7Hr1G119340.3	Barley	extracellular, golgi, plastid	19.94	20.06
HORVU7Hr1G119220.1	Barley	extracellular, golgi, plastid	19.61	19.49
HORVU7Hr1G119200.1	Barley	golgi, plastid, vacuole	19.61	19.3

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	UniProt:A0A287J2X0	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0019953	EnsemblPlantsGene:HORVU2Hr1G097490	EnsemblPlants:HORVU2Hr1G097490.1	InterPro:IPR007112
InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357	PFAM:PF03330
PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF22
InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	TMHMM:TMhelix
UniParc:UPI000B469C14	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:679393499..679394981

Molecular Weight (calculated)

32959.0 Da

IEP (calculated)

9.604

GRAVY (calculated)

-0.155

Length

311 amino acids

Sequence
(BLAST)

001: KQRTPSSWYY NSANLASPLA FCLLTDRSSM AASRGTLLLA TVLVILSLFV SPISGYWKAS RTRTRRPSSR RSWSSGGATW YGSPYGAGSD GGACGYQSAV
101: GQRPFSSMIA AGGSSFFKSG KGCGACYQVK CTGNKACSGR PVTVVITDSC PDGICASEDH FDMSGTAFGA MANRGMADRL RSAGQLRIHY ARVPCKYNGM
201: NIVFKVDAGS NPFYLSVLIM YQAGDGDLSA VDIMQGGCAP GHHNDHGQPW MAMKQSWGAL WLLQSNNGKP LQAPFSFRLT SGSGKVLEVT NAIPSGWTAG
301: TSYSSSVNYA S

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.