Factsheet for HORVU5Hr1G019100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G079400.1	Wheat	extracellular, plasma membrane	90.08	93.26
TraesCS5A01G073100.1	Wheat	extracellular, plasma membrane	90.08	92.98
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	89.8	91.35
HORVU6Hr1G055090.1	Barley	extracellular	59.77	78.73
HORVU3Hr1G105170.1	Barley	plastid	55.24	74.14
HORVU3Hr1G073140.1	Barley	plastid	55.24	74.14
Os03t0102700-01	Rice	plastid	57.22	72.4
HORVU3Hr1G105180.1	Barley	extracellular	61.47	70.92
HORVU3Hr1G073120.1	Barley	extracellular	61.47	70.92
HORVU3Hr1G001920.2	Barley	extracellular	56.37	70.82
KXG40416	Sorghum	extracellular, vacuole	58.92	65.0
HORVU3Hr1G076110.1	Barley	cytosol, extracellular	24.93	63.77
Zm00001d027283_P001	Maize	extracellular	56.94	63.21
HORVU3Hr1G105520.1	Barley	extracellular	61.19	62.61
HORVU6Hr1G005760.1	Barley	extracellular	47.59	58.95
HORVU6Hr1G005810.3	Barley	extracellular	48.73	56.77
HORVU1Hr1G054210.1	Barley	extracellular	43.06	56.09
HORVU1Hr1G054240.2	Barley	plastid	48.44	53.94
HORVU4Hr1G088080.4	Barley	plastid	60.34	52.85
HORVU2Hr1G013360.1	Barley	extracellular	35.13	49.4
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	33.14	49.37
HORVU0Hr1G005490.1	Barley	extracellular	39.66	48.95
HORVU0Hr1G016380.2	Barley	extracellular	35.41	47.17
HORVU4Hr1G086830.1	Barley	extracellular	35.41	46.99
HORVU1Hr1G053300.1	Barley	extracellular	36.83	46.93
GSMUA_AchrUn_...	Banana	extracellular	12.18	46.74
HORVU2Hr1G097480.1	Barley	extracellular	36.83	45.94
HORVU0Hr1G016410.1	Barley	extracellular	36.54	44.95
HORVU6Hr1G063180.1	Barley	extracellular	36.54	44.95
HORVU0Hr1G018320.1	Barley	extracellular	36.54	44.64
HORVU4Hr1G086930.1	Barley	extracellular	34.56	44.53
HORVU2Hr1G097510.1	Barley	extracellular, mitochondrion, plastid	34.84	44.24
HORVU4Hr1G087070.2	Barley	extracellular, mitochondrion, peroxisome	35.13	44.13
HORVU4Hr1G088140.3	Barley	extracellular	37.96	41.61
HORVU2Hr1G013340.1	Barley	extracellular	31.44	38.01
HORVU6Hr1G060410.7	Barley	extracellular	28.33	37.31
HORVU2Hr1G097490.1	Barley	plastid	32.29	36.66
HORVU5Hr1G092910.9	Barley	plastid	36.83	31.4
HORVU4Hr1G081990.2	Barley	extracellular	20.96	26.43
HORVU1Hr1G052290.4	Barley	extracellular	19.55	24.91
HORVU4Hr1G081800.6	Barley	extracellular, golgi, plastid	20.11	23.75
HORVU7Hr1G119200.1	Barley	golgi, plastid, vacuole	19.26	21.52
HORVU7Hr1G119220.1	Barley	extracellular, golgi, plastid	18.7	21.09
HORVU7Hr1G119340.3	Barley	extracellular, golgi, plastid	18.41	21.04

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	UniProt:A0A287QJM6	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150
GO:GO:0019953	EnsemblPlantsGene:HORVU5Hr1G019100	EnsemblPlants:HORVU5Hr1G019100.1	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF23	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000B47E448	SEG:seg

Description

No Description!

Coordinates

chrchr5H:-:81572972..81576459

Molecular Weight (calculated)

38193.4 Da

IEP (calculated)

7.814

GRAVY (calculated)

-0.117

Length

353 amino acids

Sequence
(BLAST)

001: MAAAFSFARV AALFFLVAAH PHGCCGCGFL PDLFCYPPPP APTTNVPATN VPASNIPTSN SSSGGGGGTN GDGGGWLDAR ATWYGAPNGA GPYDNGGACG
101: FKNVNWPPFS SMTSCGNQPL FKDGKGCGSC YQIRCVAHRA CSGVPETVII TDMNYYPVSR YHFDLSGTAF GAMAKYGRND ELRHAGIIDM QFKRVPCQYP
201: GLTVTFRVQH GSNPNYLAIL VEYEDGDGDV AQVDIMESRL PDRAPTGYWT PMRESWGSIW RLDRLRPLQG PFSLRVTDES GRSVVANQVI PAYWQPNAAY
301: RSLVQFDETL PLSLVTSGAT TRRLLVLPMP MSMYSAARTY VWPCVRSILA LAV

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.