Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G073140.1 | Barley | plastid | 100.0 | 100.0 |
| HORVU6Hr1G055090.1 | Barley | extracellular | 79.47 | 77.99 |
| HORVU3Hr1G073120.1 | Barley | extracellular | 89.35 | 76.8 |
| HORVU3Hr1G105180.1 | Barley | extracellular | 89.35 | 76.8 |
| Os03t0102700-01 | Rice | plastid | 76.43 | 72.04 |
| TraesCS3A01G479900.1 | Wheat | extracellular | 86.31 | 71.16 |
| HORVU3Hr1G001920.2 | Barley | extracellular | 70.72 | 66.19 |
| HORVU3Hr1G105520.1 | Barley | extracellular | 85.93 | 65.51 |
| KXG40416 | Sorghum | extracellular, vacuole | 79.47 | 65.31 |
| HORVU3Hr1G076110.1 | Barley | cytosol, extracellular | 33.46 | 63.77 |
| Zm00001d027283_P001 | Maize | extracellular | 74.9 | 61.95 |
| HORVU6Hr1G005760.1 | Barley | extracellular | 63.12 | 58.25 |
| HORVU5Hr1G019100.1 | Barley | extracellular, plasma membrane | 74.14 | 55.24 |
| HORVU6Hr1G005810.3 | Barley | extracellular | 62.36 | 54.13 |
| HORVU1Hr1G054210.1 | Barley | extracellular | 55.51 | 53.87 |
| HORVU1Hr1G054240.2 | Barley | plastid | 61.98 | 51.42 |
| HORVU2Hr1G013380.1 | Barley | cytosol, extracellular, mitochondrion | 45.63 | 50.63 |
| HORVU4Hr1G088080.4 | Barley | plastid | 76.05 | 49.63 |
| GSMUA_AchrUn_... | Banana | extracellular | 16.73 | 47.83 |
| HORVU1Hr1G053300.1 | Barley | extracellular | 50.19 | 47.65 |
| HORVU2Hr1G013360.1 | Barley | extracellular | 45.25 | 47.41 |
| HORVU4Hr1G086830.1 | Barley | extracellular | 47.91 | 47.37 |
| HORVU0Hr1G005490.1 | Barley | extracellular | 51.33 | 47.2 |
| HORVU4Hr1G086930.1 | Barley | extracellular | 47.53 | 45.62 |
| HORVU4Hr1G087070.2 | Barley | extracellular, mitochondrion, peroxisome | 47.91 | 44.84 |
| HORVU0Hr1G016380.2 | Barley | extracellular | 44.11 | 43.77 |
| HORVU2Hr1G097510.1 | Barley | extracellular, mitochondrion, plastid | 45.25 | 42.81 |
| HORVU2Hr1G097480.1 | Barley | extracellular | 46.01 | 42.76 |
| HORVU6Hr1G063180.1 | Barley | extracellular | 44.11 | 40.42 |
| HORVU0Hr1G016410.1 | Barley | extracellular | 44.11 | 40.42 |
| HORVU0Hr1G018320.1 | Barley | extracellular | 43.73 | 39.79 |
| HORVU4Hr1G088140.3 | Barley | extracellular | 46.77 | 38.2 |
| HORVU2Hr1G013340.1 | Barley | extracellular | 40.68 | 36.64 |
| HORVU6Hr1G060410.7 | Barley | extracellular | 36.12 | 35.45 |
| HORVU2Hr1G097490.1 | Barley | plastid | 41.83 | 35.37 |
| HORVU5Hr1G092910.9 | Barley | plastid | 44.11 | 28.02 |
| HORVU4Hr1G081990.2 | Barley | extracellular | 27.38 | 25.71 |
| HORVU1Hr1G052290.4 | Barley | extracellular | 25.1 | 23.83 |
| HORVU4Hr1G081800.6 | Barley | extracellular, golgi, plastid | 27.0 | 23.75 |
| HORVU7Hr1G119200.1 | Barley | golgi, plastid, vacuole | 24.33 | 20.25 |
| HORVU7Hr1G119220.1 | Barley | extracellular, golgi, plastid | 23.57 | 19.81 |
| HORVU7Hr1G119340.3 | Barley | extracellular, golgi, plastid | 23.19 | 19.74 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | UniProt:A0A287MJ94 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom |
| InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 |
| GO:GO:0019953 | EnsemblPlantsGene:HORVU3Hr1G105170 | EnsemblPlants:HORVU3Hr1G105170.1 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 |
| InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 |
| PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF23 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf |
| SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | UniParc:UPI000B48298D | SEG:seg | : |
Description
No Description!
Coordinates
chrchr3H:+:667707527..667708510
Molecular Weight (calculated)
28348.1 Da
IEP (calculated)
5.677
GRAVY (calculated)
-0.444
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: WQRPPPPTSL RSFSSGCSPP MAASGSANGS SGGWFDARAT WYGAPDGAGP LDNGGACGFK NVNLPPFNAM TSCGNEPLFK DGKGCGSCYQ IRCEGKAHPA
101: CSGVPETVII TDMNYYPVAR YHFDLSGTAF GAMAKEGRND ELRHAGIIDM QFKRVPCQYA GLSVTFHVEK GSNPNYLAIL VEYGNGDGDV AQVDLMDGGE
201: PTGSWRPMRE SWGSIWRMDT RRPLRGPFSL RVTNGSGRSL VADQVIPADW QPDTVYSSDV QFD
101: CSGVPETVII TDMNYYPVAR YHFDLSGTAF GAMAKEGRND ELRHAGIIDM QFKRVPCQYA GLSVTFHVEK GSNPNYLAIL VEYGNGDGDV AQVDLMDGGE
201: PTGSWRPMRE SWGSIWRMDT RRPLRGPFSL RVTNGSGRSL VADQVIPADW QPDTVYSSDV QFD
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.