Factsheet for HORVU4Hr1G088140.3

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G076110.1	Barley	cytosol, extracellular	21.12	49.28
HORVU3Hr1G105170.1	Barley	plastid	38.2	46.77
HORVU3Hr1G073140.1	Barley	plastid	38.2	46.77
HORVU6Hr1G055090.1	Barley	extracellular	37.58	45.15
HORVU3Hr1G001920.2	Barley	extracellular	37.58	43.06
HORVU3Hr1G105180.1	Barley	extracellular	39.75	41.83
HORVU3Hr1G073120.1	Barley	extracellular	39.75	41.83
HORVU1Hr1G054210.1	Barley	extracellular	33.54	39.85
HORVU6Hr1G005760.1	Barley	extracellular	34.47	38.95
HORVU6Hr1G005810.3	Barley	extracellular	36.65	38.94
HORVU1Hr1G054240.2	Barley	plastid	37.58	38.17
HORVU5Hr1G019100.1	Barley	extracellular, plasma membrane	41.61	37.96
HORVU3Hr1G105520.1	Barley	extracellular	39.44	36.81
HORVU4Hr1G086830.1	Barley	extracellular	29.19	35.34
HORVU0Hr1G005490.1	Barley	extracellular	30.75	34.62
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	25.47	34.6
HORVU0Hr1G016380.2	Barley	extracellular	28.26	34.34
HORVU4Hr1G086930.1	Barley	extracellular	29.19	34.31
HORVU1Hr1G053300.1	Barley	extracellular	29.5	34.3
HORVU2Hr1G097480.1	Barley	extracellular	30.12	34.28
HORVU4Hr1G087070.2	Barley	extracellular, mitochondrion, peroxisome	28.88	33.1
HORVU2Hr1G013360.1	Barley	extracellular	25.78	33.07
HORVU6Hr1G063180.1	Barley	extracellular	29.19	32.75
HORVU0Hr1G016410.1	Barley	extracellular	29.19	32.75
HORVU0Hr1G018320.1	Barley	extracellular	29.19	32.53
HORVU4Hr1G088080.4	Barley	plastid	39.13	31.27
HORVU2Hr1G097510.1	Barley	extracellular, mitochondrion, plastid	25.47	29.5
HORVU2Hr1G013340.1	Barley	extracellular	25.16	27.74
HORVU6Hr1G060410.7	Barley	extracellular	22.98	27.61
HORVU2Hr1G097490.1	Barley	plastid	26.09	27.01
HORVU5Hr1G092910.9	Barley	plastid	26.4	20.53
HORVU4Hr1G081990.2	Barley	extracellular	16.46	18.93
HORVU4Hr1G081800.6	Barley	extracellular, golgi, plastid	16.46	17.73
HORVU1Hr1G052290.4	Barley	extracellular	14.6	16.97
HORVU7Hr1G119340.3	Barley	extracellular, golgi, plastid	15.84	16.5
HORVU7Hr1G119200.1	Barley	golgi, plastid, vacuole	15.53	15.82
GSMUA_AchrUn_...	Banana	extracellular	4.35	15.22
HORVU7Hr1G119220.1	Barley	extracellular, golgi, plastid	14.6	15.02

Protein Annotations

Gene3D:2.40.40.10	MapMan:35.1	UniProt:A0A287Q185	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	GO:GO:0000003
GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	EnsemblPlantsGene:HORVU4Hr1G088140	EnsemblPlants:HORVU4Hr1G088140.3
InterPro:IPR007112	InterPro:IPR036908	InterPro:LolPI	PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225
PFscan:PS50842	PANTHER:PTHR31692	PANTHER:PTHR31692:SF20	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837
SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000B46CD5E	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr4H:+:639752978..639755421

Molecular Weight (calculated)

34604.5 Da

IEP (calculated)

10.821

GRAVY (calculated)

-0.469

Length

322 amino acids

Sequence
(BLAST)

001: MGRPQLTLLS APAPALVLAV LLLSSSYSLH SAEAAEEEAS AGLDTGVAGD PGLLNATAVS IGQSGVARAT WYGAPNGAGP YDNGGACGFK NVNRYPFMAM
101: TSCGNQPLFK DGKGCGACYK IKCTKHKACS GRQETVMITD MNYYPVAPYH FDLSGTAFGK LAKPGRNDEL RHAGIIDIQF TRGGVRVPGA EGGVPRGGGV
201: QRGVHGDPGG VRERRRRRGA GRPHGVRPRT ARRRAVDADA RVVGIHLAPR LQPSSPGAIL HPHPQRVRQD ARRPQRHPQE LEAQHLLPLH RPVQLDKMAI
301: VSHRLPPSNQ PTSKRALFWR EF

Best Arabidopsis Sequence Match ( AT2G45110.1 )
(BLAST)

001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF

Arabidopsis Description

EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.