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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:extracellular, mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
TargetP:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G376500.1 Wheat extracellular 71.74 96.12
TraesCS5D01G384200.1 Wheat extracellular 70.53 94.81
Os03t0645000-00 Rice mitochondrion 56.76 75.08
EER93754 Sorghum extracellular 52.17 70.59
HORVU2Hr1G013380.1 Barley cytosol, extracellular, mitochondrion 36.72 64.14
HORVU2Hr1G097480.1 Barley extracellular 43.72 63.96
KXG37946 Sorghum extracellular 49.52 63.08
HORVU0Hr1G016380.2 Barley extracellular 39.86 62.26
HORVU2Hr1G013360.1 Barley extracellular 36.72 60.56
GSMUA_AchrUn_... Banana extracellular 35.02 54.92
Solyc01g090810.2.1 Tomato extracellular 36.47 54.91
VIT_15s0021g02670.t01 Wine grape extracellular 35.51 53.85
VIT_15s0021g02700.t01 Wine grape extracellular 34.78 52.75
GSMUA_Achr4P26910_001 Banana extracellular 33.57 51.1
HORVU2Hr1G013340.1 Barley extracellular 35.75 50.68
HORVU2Hr1G097510.1 Barley extracellular, mitochondrion, plastid 33.82 50.36
PGSC0003DMT400048506 Potato plastid 23.43 50.0
CDY72655 Canola cytosol, plastid 20.29 49.7
KRH33426 Soybean extracellular 32.61 49.63
KRH75302 Soybean extracellular 32.85 49.1
KRG88934 Soybean extracellular, vacuole 32.85 49.1
CDY18950 Canola cytosol, extracellular, plastid 27.78 48.52
HORVU0Hr1G016410.1 Barley extracellular 33.57 48.43
HORVU6Hr1G063180.1 Barley extracellular 33.57 48.43
CDY72345 Canola cytosol 28.26 47.95
CDY18948 Canola extracellular 22.46 47.69
CDY72505 Canola cytosol 18.36 47.5
AT2G45110.1 Thale cress extracellular 29.47 47.1
HORVU2Hr1G097490.1 Barley plastid 35.27 46.95
KRH33423 Soybean extracellular 31.4 46.93
CDY18951 Canola extracellular 31.16 46.91
Solyc10g018500.1.1 Tomato extracellular 29.95 46.79
AT1G65681.1 Thale cress cytosol 25.12 46.64
HORVU0Hr1G018320.1 Barley extracellular 32.13 46.02
CDX74711 Canola extracellular 28.99 45.98
VIT_09s0002g08510.t01 Wine grape extracellular 30.92 45.88
CDY70406 Canola extracellular 30.19 45.62
CDX74710 Canola extracellular 30.19 45.62
Bra000370.1-P Field mustard extracellular 28.5 45.56
CDX83404 Canola extracellular 28.5 45.56
Bra004889.1-P Field mustard extracellular 30.19 45.45
PGSC0003DMT400030395 Potato cytosol, extracellular, mitochondrion, nucleus 14.25 45.38
KRH65410 Soybean extracellular 29.23 45.32
CDX96901 Canola extracellular 28.99 45.28
Bra035987.1-P Field mustard extracellular 28.99 45.28
CDY14888 Canola extracellular 28.99 45.28
AT1G65680.1 Thale cress extracellular 29.71 45.05
HORVU3Hr1G076110.1 Barley cytosol, extracellular 14.98 44.93
HORVU6Hr1G055090.1 Barley extracellular 28.99 44.78
HORVU3Hr1G073140.1 Barley plastid 28.02 44.11
HORVU3Hr1G105170.1 Barley plastid 28.02 44.11
CDY18946 Canola extracellular 28.26 43.98
Solyc01g090820.1.1 Tomato extracellular 27.05 43.58
HORVU1Hr1G054210.1 Barley extracellular 28.5 43.54
Solyc03g093390.2.1 Tomato extracellular, nucleus 29.47 42.81
HORVU3Hr1G001920.2 Barley extracellular 28.99 42.7
Solyc05g052330.1.1 Tomato extracellular 27.05 41.79
HORVU6Hr1G005760.1 Barley extracellular 28.74 41.75
CDX95627 Canola extracellular 28.02 41.58
HORVU6Hr1G005810.3 Barley extracellular 29.95 40.92
Solyc07g049540.1.1 Tomato extracellular 24.88 40.08
HORVU3Hr1G073120.1 Barley extracellular 29.47 39.87
HORVU3Hr1G105180.1 Barley extracellular 29.47 39.87
Bra004891.1-P Field mustard cytosol, nucleus, plastid 13.29 39.86
HORVU4Hr1G086830.1 Barley extracellular 25.6 39.85
HORVU1Hr1G054240.2 Barley plastid 30.19 39.43
Bra004890.1-P Field mustard extracellular 29.95 38.99
Bra003421.1-P Field mustard extracellular 24.88 38.72
CDX67835 Canola extracellular 24.88 38.72
HORVU1Hr1G053300.1 Barley extracellular 25.85 38.63
CDY71186 Canola extracellular 24.88 38.01
AT3G60570.1 Thale cress extracellular 24.15 37.88
PGSC0003DMT400095086 Potato plastid 22.71 37.6
HORVU4Hr1G086930.1 Barley extracellular 24.88 37.59
HORVU5Hr1G019100.1 Barley extracellular, plasma membrane 31.4 36.83
HORVU4Hr1G087070.2 Barley extracellular, mitochondrion, peroxisome 24.88 36.65
HORVU6Hr1G060410.7 Barley extracellular 23.67 36.57
CDX74713 Canola extracellular 29.95 36.15
HORVU3Hr1G105520.1 Barley extracellular 29.71 35.65
HORVU0Hr1G005490.1 Barley extracellular 23.67 34.27
Bra014484.1-P Field mustard extracellular 26.57 30.56
CDY48362 Canola extracellular 26.33 30.53
HORVU4Hr1G088080.4 Barley plastid 29.47 30.27
Zm00001d033231_P003 Maize extracellular 51.69 29.97
PGSC0003DMT400066943 Potato cytosol, plastid, vacuole 32.13 28.98
HORVU4Hr1G081990.2 Barley extracellular 18.12 26.79
HORVU4Hr1G081800.6 Barley extracellular, golgi, plastid 19.32 26.76
HORVU4Hr1G088140.3 Barley extracellular 20.53 26.4
HORVU1Hr1G052290.4 Barley extracellular 15.94 23.83
HORVU7Hr1G119340.3 Barley extracellular, golgi, plastid 14.01 18.77
HORVU7Hr1G119200.1 Barley golgi, plastid, vacuole 14.01 18.35
HORVU7Hr1G119220.1 Barley extracellular, golgi, plastid 13.77 18.21
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1UniProt:A0A287S9F3InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBDInterPro:Expansin_CBD_sfGO:GO:0000003GO:GO:0005575GO:GO:0005576GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0019953EnsemblPlantsGene:HORVU5Hr1G092910EnsemblPlants:HORVU5Hr1G092910.9InterPro:IPR007112
InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908InterPro:LolPIPFAM:PF01357PFAM:PF03330
PRINTS:PR00829PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF14
InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF49590SUPFAM:SSF50685TMHMM:TMhelix
UniParc:UPI000B470A5ESEG:seg::::
Description
No Description!
Coordinates
chrchr5H:-:589788228..589791966
Molecular Weight (calculated)
43753.3 Da
IEP (calculated)
8.427
GRAVY (calculated)
-0.013
Length
414 amino acids
Sequence
(BLAST)
001: MSTKKRQVTP HPSPISLHVT ARHSTSPTFS LLRPAAASVP PPPPPPAFHQ TPPSPCKHSS NWTPRPGFAW FLFRICAAAF ARLTRAGEEH GGLRVRLANC
101: HRVLRMASKL QLLSFIATGV VIASLLHSCA SIDIHRELSG WSGGIATWYG DANGAGSEGG ACGFQYAVDQ PPFSSMIAAG GPVIYDSGDG CGSCYRVVCG
201: GNQACSGIPV TVVITDQGPG GGPCLSGLVD GQCQNEAAHF DMSGTAFGAM AKPGQADQLR GAGLIQIEYT RVTCDWTGVG LTFKVDTGSN PNYLAVLVEY
301: EDGDSDLYAV DIMQSGAGAT GVWIPMQQSW GAVWKLNSGS TLQGPFSIRL TFRSGKMLVA GNAIPTGWNP GVAYQPGGVA VRERASGGRR RHGFEGRLGW
401: LYHLPLLLMV LFQL
Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.