Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P13730_001 | Banana | extracellular | 52.14 | 51.15 |
| HORVU2Hr1G013380.1 | Barley | cytosol, extracellular, mitochondrion | 47.08 | 51.05 |
| GSMUA_Achr2P13750_001 | Banana | extracellular | 51.75 | 50.96 |
| GSMUA_Achr2P13740_001 | Banana | extracellular | 50.97 | 50.0 |
| Solyc10g018500.1.1 | Tomato | extracellular | 51.36 | 49.81 |
| TraesCS2D01G592900.1 | Wheat | extracellular | 48.25 | 49.8 |
| TraesCS2A01G580300.1 | Wheat | extracellular | 48.25 | 49.8 |
| TraesCS2B01G607400.1 | Wheat | extracellular | 47.86 | 49.4 |
| TraesCS2D01G078900.1 | Wheat | extracellular | 48.64 | 49.21 |
| TraesCS2B01G095600.1 | Wheat | extracellular | 48.64 | 49.02 |
| TraesCS2A01G580200.1 | Wheat | extracellular | 47.86 | 49.0 |
| TraesCS2A01G081200.1 | Wheat | extracellular | 48.25 | 48.82 |
| TraesCSU01G009600.1 | Wheat | extracellular | 47.86 | 48.62 |
| Solyc05g052330.1.1 | Tomato | extracellular | 50.58 | 48.51 |
| CDY72345 | Canola | cytosol | 45.91 | 48.36 |
| HORVU2Hr1G013360.1 | Barley | extracellular | 47.08 | 48.21 |
| TraesCS2D01G104800.1 | Wheat | extracellular | 47.47 | 48.03 |
| TraesCS2B01G095700.1 | Wheat | extracellular | 47.08 | 48.02 |
| CDY18950 | Canola | cytosol, extracellular, plastid | 43.97 | 47.68 |
| TraesCS2A01G080800.1 | Wheat | extracellular | 47.08 | 47.64 |
| TraesCS2D01G078800.1 | Wheat | extracellular | 47.08 | 47.64 |
| Solyc07g049540.1.1 | Tomato | extracellular | 47.47 | 47.47 |
| EES07509 | Sorghum | extracellular | 48.64 | 47.35 |
| TraesCS2D01G078600.1 | Wheat | extracellular | 43.97 | 47.28 |
| KXG19818 | Sorghum | extracellular | 47.47 | 47.1 |
| Zm00001d051368_P001 | Maize | extracellular | 28.79 | 46.84 |
| CDX74711 | Canola | extracellular | 47.47 | 46.74 |
| AT1G65681.1 | Thale cress | cytosol | 40.47 | 46.64 |
| EER88254 | Sorghum | extracellular | 46.69 | 46.33 |
| Solyc01g090810.2.1 | Tomato | extracellular | 49.42 | 46.18 |
| TraesCS2A01G105200.1 | Wheat | extracellular | 45.53 | 46.06 |
| Zm00001d045861_P001 | Maize | mitochondrion | 47.47 | 46.04 |
| AT2G45110.1 | Thale cress | extracellular | 46.3 | 45.95 |
| TraesCS6A01G249700.1 | Wheat | extracellular | 47.47 | 45.86 |
| Os04t0552000-00 | Rice | extracellular | 47.08 | 45.83 |
| HORVU0Hr1G016380.2 | Barley | extracellular | 47.08 | 45.66 |
| TraesCS6A01G249400.2 | Wheat | extracellular | 47.08 | 45.66 |
| Bra000370.1-P | Field mustard | extracellular | 45.91 | 45.56 |
| CDX83404 | Canola | extracellular | 45.91 | 45.56 |
| TraesCS2B01G432300.1 | Wheat | plastid | 46.3 | 45.42 |
| TraesCS2A01G413600.1 | Wheat | extracellular | 46.3 | 45.42 |
| Zm00001d017493_P001 | Maize | extracellular | 47.08 | 45.32 |
| Zm00001d045792_P001 | Maize | extracellular | 47.47 | 45.19 |
| TraesCS6D01G231400.1 | Wheat | extracellular | 46.69 | 45.11 |
| CDY18946 | Canola | extracellular | 46.3 | 44.74 |
| Os02t0658600-00 | Rice | plastid | 47.47 | 44.69 |
| TraesCS2D01G411000.1 | Wheat | extracellular | 45.53 | 44.66 |
| TraesCS2B01G122100.1 | Wheat | extracellular | 33.07 | 44.5 |
| EES11234 | Sorghum | extracellular | 45.53 | 44.49 |
| CDY72505 | Canola | cytosol | 27.63 | 44.38 |
| Zm00001d026170_P001 | Maize | extracellular | 45.14 | 44.27 |
| Os05t0246300-01 | Rice | extracellular | 44.75 | 43.56 |
| CDX96901 | Canola | extracellular | 43.97 | 42.64 |
| CDY72655 | Canola | cytosol, plastid | 28.02 | 42.6 |
| CDY14888 | Canola | extracellular | 43.58 | 42.26 |
| Bra035987.1-P | Field mustard | extracellular | 43.58 | 42.26 |
| GSMUA_AchrUn_... | Banana | extracellular | 29.57 | 42.22 |
| HORVU2Hr1G097480.1 | Barley | extracellular | 45.91 | 41.7 |
| AT3G60570.1 | Thale cress | extracellular | 42.8 | 41.67 |
| Solyc03g093390.2.1 | Tomato | extracellular, nucleus | 45.14 | 40.7 |
| CDX95627 | Canola | extracellular | 43.58 | 40.14 |
| Solyc07g054170.2.1 | Tomato | extracellular | 41.25 | 39.7 |
| Solyc10g008440.2.1 | Tomato | extracellular | 40.47 | 39.69 |
| HORVU2Hr1G013340.1 | Barley | extracellular | 44.75 | 39.38 |
| CDY71186 | Canola | extracellular | 41.25 | 39.11 |
| CDX67835 | Canola | extracellular | 40.47 | 39.1 |
| Bra003421.1-P | Field mustard | extracellular | 40.47 | 39.1 |
| Bra004891.1-P | Field mustard | cytosol, nucleus, plastid | 19.84 | 36.96 |
| TraesCS5D01G384200.1 | Wheat | extracellular | 43.19 | 36.04 |
| TraesCS5B01G376500.1 | Wheat | extracellular | 43.19 | 35.92 |
| EER93754 | Sorghum | extracellular | 41.25 | 34.64 |
| Os03t0645000-00 | Rice | mitochondrion | 40.86 | 33.55 |
| KXG37946 | Sorghum | extracellular | 42.02 | 33.23 |
| CDY48362 | Canola | extracellular | 43.19 | 31.09 |
| Bra014484.1-P | Field mustard | extracellular | 43.19 | 30.83 |
| Solyc06g060970.1.1 | Tomato | extracellular | 27.63 | 28.63 |
| Solyc08g077910.2.1 | Tomato | extracellular | 27.63 | 28.29 |
| Solyc08g077330.2.1 | Tomato | extracellular | 27.63 | 27.84 |
| HORVU5Hr1G092910.9 | Barley | plastid | 43.58 | 27.05 |
| Solyc08g077900.2.1 | Tomato | extracellular | 26.46 | 26.88 |
| Solyc01g112000.2.1 | Tomato | extracellular | 24.12 | 23.75 |
| Zm00001d033231_P003 | Maize | extracellular | 40.47 | 14.57 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | UniProt:K4AZ23 | InterPro:LolPI |
| PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 |
| PANTHER:PTHR31692 | PANTHER:PTHR31692:SF3 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 |
| SUPFAM:SSF50685 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc01g090820.1 | EnsemblPlants:Solyc01g090820.1.1 | UniParc:UPI0002767E1D | : |
Description
No Description!
Coordinates
chr1:+:84526585..84527748
Molecular Weight (calculated)
27133.3 Da
IEP (calculated)
8.745
GRAVY (calculated)
-0.003
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MGYNVIIFNF LALCLLQHCT CAPVKSLNAS ISSFQPAVAT FYGPPTGAGS EGGACGYTDA VSKPPFNSFV SAGNGPLFKK GLGCGACYQV LCKLAPCTGR
101: PVTVTITDEC PGCSGSIHFD LSGTAMGALA KPGQANALRN IGNIPISYQR VPCHYQNWKI AFKVDQGSSP NFLSVNVEFQ NGDGDLSLVE FLPARSNQAI
201: RANHVFGATW SSNINPAAQP APYSIRVTTG SNKKLTATNV IPVGWQPGRT YRSNVNF
101: PVTVTITDEC PGCSGSIHFD LSGTAMGALA KPGQANALRN IGNIPISYQR VPCHYQNWKI AFKVDQGSSP NFLSVNVEFQ NGDGDLSLVE FLPARSNQAI
201: RANHVFGATW SSNINPAAQP APYSIRVTTG SNKKLTATNV IPVGWQPGRT YRSNVNF
001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF
Arabidopsis Description
EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.