Factsheet for GSMUA_AchrUn_randomP23780_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P11930_001	Banana	extracellular	46.11	50.92
GSMUA_Achr2P13740_001	Banana	extracellular	60.56	41.6
GSMUA_Achr2P13730_001	Banana	extracellular	60.56	41.6
GSMUA_AchrUn_...	Banana	extracellular	56.11	38.26
GSMUA_Achr2P13750_001	Banana	extracellular	55.0	37.93
CDY18948	Canola	extracellular	40.56	37.44
VIT_15s0021g02670.t01	Wine grape	extracellular	53.33	35.16
VIT_15s0021g02700.t01	Wine grape	extracellular	52.78	34.8
GSMUA_Achr7P07040_001	Banana	extracellular	53.89	34.52
GSMUA_Achr4P26910_001	Banana	extracellular	51.67	34.19
Solyc01g090810.2.1	Tomato	extracellular	51.11	33.45
KRH33426	Soybean	extracellular	49.44	32.72
AT1G65680.1	Thale cress	extracellular	48.33	31.87
KRH33423	Soybean	extracellular	48.33	31.41
KRH75302	Soybean	extracellular	48.33	31.41
KRG88934	Soybean	extracellular, vacuole	47.22	30.69
CDY18951	Canola	extracellular	46.67	30.55
CDX74710	Canola	extracellular	45.56	29.93
CDY70406	Canola	extracellular	45.56	29.93
CDY72345	Canola	cytosol	40.56	29.92
Bra004889.1-P	Field mustard	extracellular	45.56	29.82
Bra000370.1-P	Field mustard	extracellular	42.78	29.73
CDX83404	Canola	extracellular	42.78	29.73
Solyc01g090820.1.1	Tomato	extracellular	42.22	29.57
CDY18950	Canola	cytosol, extracellular, plastid	38.89	29.54
Solyc03g093390.2.1	Tomato	extracellular, nucleus	46.67	29.47
CDX74711	Canola	extracellular	42.22	29.12
Bra035987.1-P	Field mustard	extracellular	42.78	29.06
CDY14888	Canola	extracellular	42.78	29.06
CDX96901	Canola	extracellular	42.78	29.06
VIT_09s0002g08510.t01	Wine grape	extracellular	45.0	29.03
AT2G45110.1	Thale cress	extracellular	41.11	28.57
KRH65410	Soybean	extracellular	41.67	28.09
Solyc10g018500.1.1	Tomato	extracellular	41.11	27.92
CDY18946	Canola	extracellular	41.11	27.82
CDX95627	Canola	extracellular	42.22	27.24
GSMUA_AchrUn_...	Banana	extracellular	39.44	27.0
PGSC0003DMT400048506	Potato	plastid	28.33	26.29
AT3G60570.1	Thale cress	extracellular	38.33	26.14
Solyc07g049540.1.1	Tomato	extracellular	37.22	26.07
GSMUA_Achr1P00120_001	Banana	extracellular	37.78	25.56
AT1G65681.1	Thale cress	cytosol	31.67	25.56
Bra004890.1-P	Field mustard	extracellular	45.0	25.47
Solyc05g052330.1.1	Tomato	extracellular	37.78	25.37
GSMUA_Achr5P12080_001	Banana	extracellular	37.22	25.09
Bra003421.1-P	Field mustard	extracellular	36.67	24.81
CDX67835	Canola	extracellular	36.67	24.81
CDY71186	Canola	extracellular	37.22	24.72
PGSC0003DMT400095086	Potato	plastid	33.33	24.0
CDY72655	Canola	cytosol, plastid	22.22	23.67
CDX74713	Canola	extracellular	45.0	23.62
CDY72505	Canola	cytosol	20.56	23.12
GSMUA_AchrUn_...	Banana	extracellular	28.89	20.47
GSMUA_Achr11P...	Banana	extracellular	27.78	19.68
GSMUA_AchrUn_...	Banana	extracellular	20.56	19.68
CDY48362	Canola	extracellular	37.22	18.77
Bra014484.1-P	Field mustard	extracellular	37.22	18.61
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	12.22	16.92
GSMUA_Achr5P11590_001	Banana	extracellular	24.44	16.86
GSMUA_Achr11P...	Banana	extracellular	24.44	16.54
GSMUA_Achr11P...	Banana	extracellular	23.89	16.23
PGSC0003DMT400066943	Potato	cytosol, plastid, vacuole	40.56	15.9
GSMUA_Achr5P12710_001	Banana	extracellular, nucleus, plasma membrane	27.22	15.36
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	11.67	15.22
GSMUA_Achr5P19030_001	Banana	extracellular	22.22	15.15
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	24.44	14.33
GSMUA_AchrUn_...	Banana	extracellular	5.0	9.78

Protein Annotations

Gene3D:2.40.40.10	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	GO:GO:0005575	GO:GO:0005576
EnsemblPlantsGene:GSMUA_AchrUn_randomG23780_001	EnsemblPlants:GSMUA_AchrUn_randomP23780_001	EnsemblPlants:GSMUA_AchrUn_randomT23780_001	InterPro:IPR007112	InterPro:IPR036908	UniProt:M0UBT6
PRINTS:PR01225	PFscan:PS50842	PANTHER:PTHR31692	PANTHER:PTHR31692:SF3	InterPro:RlpA-like_sf	SUPFAM:SSF50685
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00029481A2	SEG:seg	:	:

Description

Putative Expansin-B18 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG23780_001]

Coordinates

chrchrUn_random:+:116959165..116959931

Molecular Weight (calculated)

18249.7 Da

IEP (calculated)

8.204

GRAVY (calculated)

0.319

Length

180 amino acids

Sequence
(BLAST)

001: MAFSLRHPSS LLVFIALLGF LSLFRPCACS SRNFLNTSAV VLGTSPAEAT WYGNAHGAGS EGNVSNIPVL LATAPFSSTT AAGGPLLYKS GKGCGACYQV
101: SCTSNAACPG GPCASGAVHF DLSGSAFGAM SKPGQEDTLR AAGAIQVQYS TLPCSYPGVN VAFKVDAGSN ANYRAVLIIN

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.