Factsheet for GSMUA_Achr7P07040_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P11930_001	Banana	extracellular	42.7	73.62
GSMUA_AchrUn_...	Banana	extracellular	23.13	70.65
GSMUA_AchrUn_...	Banana	extracellular	58.72	62.5
GSMUA_Achr4P26910_001	Banana	extracellular	56.94	58.82
GSMUA_Achr2P13730_001	Banana	extracellular	53.38	57.25
GSMUA_Achr2P13740_001	Banana	extracellular	53.02	56.87
GSMUA_Achr2P13750_001	Banana	extracellular	51.96	55.94
GSMUA_AchrUn_...	Banana	extracellular	34.52	53.89
GSMUA_AchrUn_...	Banana	extracellular	40.21	42.97
GSMUA_Achr1P00120_001	Banana	extracellular	40.21	42.48
GSMUA_Achr5P12080_001	Banana	extracellular	40.21	42.32
GSMUA_Achr11P...	Banana	extracellular	29.54	31.2
GSMUA_Achr11P...	Banana	extracellular	28.11	31.1
GSMUA_AchrUn_...	Banana	extracellular	28.11	31.1
GSMUA_Achr5P19030_001	Banana	extracellular	27.05	28.79
GSMUA_Achr5P11590_001	Banana	extracellular	26.69	28.74
GSMUA_Achr11P...	Banana	extracellular	27.05	28.68
GSMUA_AchrUn_...	Banana	extracellular	18.51	27.66
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	26.33	24.1
GSMUA_Achr5P12710_001	Banana	extracellular, nucleus, plasma membrane	25.27	22.26

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
EnsemblPlantsGene:GSMUA_Achr7G07040_001	EnsemblPlants:GSMUA_Achr7P07040_001	EnsemblPlants:GSMUA_Achr7T07040_001	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	InterPro:LolPI	UniProt:M0TFE4	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829
PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF52	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000294B716
SEG:seg	:	:	:	:	:

Description

Expansin-B18 [Source:GMGC_GENE;Acc:GSMUA_Achr7G07040_001]

Coordinates

chr7:+:5169045..5170194

Molecular Weight (calculated)

29362.5 Da

IEP (calculated)

6.089

GRAVY (calculated)

0.027

Length

281 amino acids

Sequence
(BLAST)

001: MAFPLHGSSS VLSFIVLLAL SSLLSPCNCF NPKRLNFSSS ALEGWSPAGA TWYGSAHGAG SDGGACGYGN GVDRAPFSSM IAAGSPSIFK SGEGCGACYQ
101: IRCTKNAACS GNPATIVLTD ECPGGICLAE PVHFDLSGTA FGAMAKPGQS DQLRNAGVLQ IQYTRVECNY AGIDVAFHVD VGSNPYYIAV LIEYEGGDGD
201: LACVDIKEGA SSSSSTPSSS WIPMTQSWGA EWRLNSGPKL RPPFSFRLTS GLSRKVLVAN NVIPVGWQPG ATYRSLVNYS D

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.