Factsheet for GSMUA_Achr2P11930_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	extracellular	50.92	46.11
GSMUA_Achr7P07040_001	Banana	extracellular	73.62	42.7
GSMUA_AchrUn_...	Banana	extracellular	61.96	38.26
GSMUA_Achr2P13730_001	Banana	extracellular	60.12	37.4
GSMUA_Achr2P13740_001	Banana	extracellular	60.12	37.4
GSMUA_Achr4P26910_001	Banana	extracellular	61.96	37.13
GSMUA_Achr2P13750_001	Banana	extracellular	57.06	35.63
GSMUA_Achr1P00120_001	Banana	extracellular	41.72	25.56
GSMUA_AchrUn_...	Banana	extracellular	39.88	24.71
GSMUA_Achr5P12080_001	Banana	extracellular	39.88	24.34
GSMUA_AchrUn_...	Banana	extracellular	24.54	21.28
GSMUA_Achr11P...	Banana	extracellular	31.9	20.47
GSMUA_AchrUn_...	Banana	extracellular	29.45	18.9
GSMUA_Achr5P19030_001	Banana	extracellular	29.45	18.18
GSMUA_Achr11P...	Banana	extracellular	29.45	18.05
GSMUA_Achr5P11590_001	Banana	extracellular	26.38	16.48
GSMUA_Achr11P...	Banana	extracellular	26.38	16.23
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	27.61	14.66
GSMUA_Achr5P12710_001	Banana	extracellular, nucleus, plasma membrane	26.38	13.48
GSMUA_AchrUn_...	Banana	extracellular	0.61	1.09

Protein Annotations

Gene3D:2.40.40.10	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	GO:GO:0000003	GO:GO:0005575
GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	EnsemblPlantsGene:GSMUA_Achr2G11930_001	EnsemblPlants:GSMUA_Achr2P11930_001	EnsemblPlants:GSMUA_Achr2T11930_001
InterPro:IPR007112	InterPro:IPR036908	InterPro:LolPI	UniProt:M0S784	PFAM:PF03330	PRINTS:PR00829
PRINTS:PR01225	PFscan:PS50842	PANTHER:PTHR31692	PANTHER:PTHR31692:SF27	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296D7F1	SEG:seg

Description

Expansin-B15 [Source:GMGC_GENE;Acc:GSMUA_Achr2G11930_001]

Coordinates

chr2:+:14540968..14541601

Molecular Weight (calculated)

16321.4 Da

IEP (calculated)

6.710

GRAVY (calculated)

0.323

Length

163 amino acids

Sequence
(BLAST)

001: MAFSLPHHSS LLVFVALLAF LSLLGQCACR KLLNSSAVAG ATWSSAGATW YGTANGAGSD GGACGYGGAV ATAPFSSMIA AGSPSIYKSG KGCGACYQVL
101: CTTNDACSGD PVTVVITDEC PGGPCLAEPV HFDLSGTAFG AMAKPSQGDQ LRNAGVLQVQ YSR

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.