Factsheet for GSMUA_AchrUn_randomP23760_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	golgi
MultiLoc:	extracellular
Plant-mPloc:	extracellular
PProwler:	secretory
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G236100.1	Wheat	cytosol	44.57	39.42
TraesCSU01G271700.1	Wheat	cytosol	44.57	39.42
TraesCS6D01G037600.1	Wheat	mitochondrion	46.74	37.07
TraesCSU01G216000.1	Wheat	cytosol	45.65	27.45
GSMUA_AchrUn_...	Banana	extracellular	68.48	23.86
GSMUA_Achr7P07040_001	Banana	extracellular	70.65	23.13
TraesCS3A01G011200.1	Wheat	cytosol	40.22	23.12
TraesCSU01G085500.1	Wheat	cytosol	46.74	21.94
GSMUA_Achr4P26910_001	Banana	extracellular	56.52	19.12
GSMUA_Achr2P13730_001	Banana	extracellular	54.35	19.08
TraesCS5A01G537300.1	Wheat	cytosol, extracellular, plastid	32.61	18.63
GSMUA_Achr2P13750_001	Banana	extracellular	52.17	18.39
GSMUA_Achr2P13740_001	Banana	extracellular	52.17	18.32
TraesCS1A01G212000.1	Wheat	extracellular	51.09	17.41
TraesCS3D01G000400.1	Wheat	cytosol	38.04	17.24
EER91947	Sorghum	extracellular	50.0	17.1
TraesCS1D01G215400.1	Wheat	extracellular	48.91	17.05
TraesCS1A01G212400.1	Wheat	extracellular	48.91	16.98
HORVU3Hr1G073140.1	Barley	plastid	47.83	16.73
HORVU3Hr1G105170.1	Barley	plastid	47.83	16.73
Os10t0555600-01	Rice	extracellular	50.0	16.73
Os03t0102500-01	Rice	extracellular	50.0	16.67
TraesCS1B01G226000.2	Wheat	extracellular	48.91	16.67
TraesCS1D01G215100.1	Wheat	plastid	51.09	16.61
HORVU6Hr1G055090.1	Barley	extracellular	47.83	16.42
TraesCS1B01G222300.1	Wheat	extracellular	46.74	16.23
EER91942	Sorghum	extracellular	46.74	16.17
Os03t0102700-01	Rice	plastid	48.91	16.13
TraesCS6A01G032700.1	Wheat	extracellular	47.83	16.12
TraesCS6B01G046000.1	Wheat	extracellular	47.83	16.12
TraesCS6D01G037700.1	Wheat	extracellular	47.83	16.12
TraesCS1A01G208200.1	Wheat	extracellular	45.65	15.85
TraesCS1D01G211500.1	Wheat	extracellular	45.65	15.85
TraesCS1A01G212600.1	Wheat	extracellular	47.83	15.83
TraesCS6B01G046100.1	Wheat	extracellular	46.74	15.75
TraesCS6B01G046200.1	Wheat	extracellular	46.74	15.75
TraesCS6B01G046300.1	Wheat	extracellular	46.74	15.75
TraesCS6B01G046400.1	Wheat	extracellular	46.74	15.75
TraesCS6D01G037500.1	Wheat	extracellular	46.74	15.75
Os10t0556100-01	Rice	extracellular	48.91	15.73
Os10t0555900-02	Rice	extracellular	45.65	15.67
EER91945	Sorghum	extracellular	46.74	15.58
HORVU6Hr1G005760.1	Barley	extracellular	47.83	15.44
TraesCS6D01G198400.1	Wheat	extracellular	50.0	15.38
TraesCS6B01G245700.1	Wheat	extracellular	48.91	15.2
EER94500	Sorghum	extracellular	47.83	15.17
KXG40417	Sorghum	mitochondrion	48.91	15.15
TraesCS6A01G217100.1	Wheat	extracellular	48.91	15.15
TraesCS5A01G538000.1	Wheat	extracellular	46.74	15.14
TraesCS2D01G459300.1	Wheat	extracellular	43.48	15.09
TraesCS1B01G225700.1	Wheat	extracellular	48.91	14.9
TraesCS1B01G225800.1	Wheat	extracellular	43.48	14.76
TraesCS4B01G375200.1	Wheat	extracellular	46.74	14.73
TraesCS2A01G458900.1	Wheat	extracellular	42.39	14.72
EER94537	Sorghum	extracellular	42.39	14.66
KXG38972	Sorghum	extracellular	42.39	14.66
OQU93456	Sorghum	cytosol, extracellular	33.7	14.62
OQU92157	Sorghum	extracellular	48.91	14.61
TraesCS1A01G212300.1	Wheat	extracellular	43.48	14.6
TraesCS1D01G215300.1	Wheat	extracellular	43.48	14.6
TraesCS3A01G011100.1	Wheat	extracellular	43.48	14.6
Os10t0555700-02	Rice	extracellular	41.3	14.56
EER91949	Sorghum	extracellular	44.57	14.54
EER94506	Sorghum	extracellular	44.57	14.54
Os10t0548600-01	Rice	plasma membrane	42.39	14.5
TraesCS4D01G361900.1	Wheat	extracellular	46.74	14.48
TraesCS3B01G524500.1	Wheat	extracellular	48.91	14.47
HORVU1Hr1G053300.1	Barley	extracellular	43.48	14.44
TraesCS3D01G476800.1	Wheat	extracellular	30.43	14.43
HORVU1Hr1G054210.1	Barley	extracellular	42.39	14.39
HORVU3Hr1G073120.1	Barley	extracellular	47.83	14.38
HORVU3Hr1G105180.1	Barley	extracellular	47.83	14.38
TraesCS3D01G474800.1	Wheat	extracellular	48.91	14.33
KXG38969	Sorghum	extracellular	41.3	14.29
TraesCS3D01G000500.1	Wheat	extracellular	42.39	14.23
HORVU1Hr1G054240.2	Barley	plastid	48.91	14.2
HORVU6Hr1G005810.3	Barley	extracellular	46.74	14.19
KXG40416	Sorghum	extracellular, vacuole	48.91	14.06
Os03t0106700-00	Rice	extracellular	34.78	14.04
TraesCS1A01G212200.1	Wheat	extracellular	41.3	14.02
TraesCS3A01G480000.1	Wheat	extracellular	48.91	14.02
TraesCS3D01G476700.1	Wheat	extracellular	46.74	14.01
TraesCS3B01G526800.1	Wheat	extracellular	45.65	14.0
TraesCS1D01G215500.1	Wheat	extracellular	47.83	13.97
TraesCS2B01G480700.1	Wheat	extracellular	40.22	13.96
HORVU3Hr1G001920.2	Barley	extracellular	42.39	13.88
TraesCS3B01G014300.1	Wheat	extracellular, nucleus	41.3	13.87
Os03t0106500-01	Rice	plasma membrane	40.22	13.86
Os03t0106800-01	Rice	plasma membrane	40.22	13.86
Os03t0106900-00	Rice	extracellular	40.22	13.86
TraesCS3A01G479900.1	Wheat	extracellular	47.83	13.79
TraesCS1B01G226100.1	Wheat	extracellular	46.74	13.78
GSMUA_AchrUn_...	Banana	extracellular	39.13	13.69
HORVU0Hr1G005490.1	Barley	extracellular	42.39	13.64
OQU92156	Sorghum	plastid	47.83	13.54
TraesCS4B01G362100.1	Wheat	extracellular	39.13	13.33
TraesCS4B01G362500.1	Wheat	extracellular	39.13	13.33
TraesCS4B01G362600.1	Wheat	extracellular, unclear	39.13	13.33
TraesCS3B01G014400.1	Wheat	cytosol	35.87	13.31
TraesCS4D01G361700.1	Wheat	extracellular	45.65	13.29
EES05315	Sorghum	extracellular	45.65	13.21
HORVU4Hr1G086830.1	Barley	extracellular	38.04	13.16
HORVU4Hr1G086930.1	Barley	extracellular	39.13	13.14
GSMUA_Achr5P12080_001	Banana	extracellular	38.04	13.11
TraesCS1B01G225900.1	Wheat	extracellular, mitochondrion, plastid	42.39	13.09
TraesCS4D01G355700.1	Wheat	extracellular	38.04	13.06
TraesCS4D01G355100.1	Wheat	extracellular	38.04	12.96
TraesCS4D01G355800.1	Wheat	extracellular	38.04	12.96
TraesCS5A01G530100.1	Wheat	extracellular	38.04	12.96
TraesCS5A01G530700.1	Wheat	extracellular	38.04	12.96
KXG38933	Sorghum	mitochondrion	43.48	12.54
OQU93455	Sorghum	extracellular	34.78	12.5
HORVU3Hr1G105520.1	Barley	extracellular	46.74	12.46
HORVU4Hr1G087070.2	Barley	extracellular, mitochondrion, peroxisome	38.04	12.46
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	42.39	12.42
GSMUA_Achr1P00120_001	Banana	extracellular	35.87	12.41
OQU93459	Sorghum	extracellular	35.87	12.41
TraesCS4B01G375600.1	Wheat	extracellular	45.65	12.32
TraesCS5B01G079400.1	Wheat	extracellular, plasma membrane	45.65	12.32
TraesCS5A01G073100.1	Wheat	extracellular, plasma membrane	45.65	12.28
HORVU5Hr1G019100.1	Barley	extracellular, plasma membrane	46.74	12.18
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	45.65	12.1
EER95683	Sorghum	extracellular	34.78	12.03
EER95684	Sorghum	extracellular	34.78	12.03
GSMUA_Achr11P...	Banana	extracellular	34.78	12.03
OQU93457	Sorghum	extracellular	34.78	12.03
OQU93458	Sorghum	extracellular	34.78	12.03
GSMUA_Achr5P11590_001	Banana	extracellular	33.7	11.88
EER91948	Sorghum	extracellular	33.7	11.15
GSMUA_Achr11P...	Banana	extracellular	31.52	10.94
HORVU4Hr1G088080.4	Barley	plastid	46.74	10.67
GSMUA_Achr5P19030_001	Banana	extracellular	30.43	10.61
GSMUA_AchrUn_...	Banana	extracellular	28.26	10.24
GSMUA_Achr11P...	Banana	extracellular	27.17	9.84
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	30.43	9.12
GSMUA_AchrUn_...	Banana	extracellular	15.22	7.45
GSMUA_Achr5P12710_001	Banana	extracellular, nucleus, plasma membrane	23.91	6.9
HORVU3Hr1G076110.1	Barley	cytosol, extracellular	9.78	6.52
GSMUA_AchrUn_...	Banana	extracellular	9.78	5.0
HORVU4Hr1G088140.3	Barley	extracellular	15.22	4.35
Zm00001d017741_P001	Maize	extracellular	2.17	1.26
GSMUA_Achr2P11930_001	Banana	extracellular	1.09	0.61

Protein Annotations

Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003
GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	EnsemblPlantsGene:GSMUA_AchrUn_randomG23760_001	EnsemblPlants:GSMUA_AchrUn_randomP23760_001
EnsemblPlants:GSMUA_AchrUn_randomT23760_001	InterPro:IPR007117	InterPro:IPR036749	InterPro:LolPI	UniProt:M0UBT4	PFAM:PF01357
PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF52	SUPFAM:SSF49590
UniParc:UPI000295E304	:	:	:	:	:

Description

Expansin-B18 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG23760_001]

Coordinates

chrchrUn_random:+:116942961..116943239

Molecular Weight (calculated)

9744.4 Da

IEP (calculated)

4.499

GRAVY (calculated)

-0.004

Length

92 amino acids

Sequence
(BLAST)

1: FPNNYLAVLI VYEGGDGDLA AVDMQQGASG SWIPMQQSWG AVWKLNSGSA LQPPFSFRLT SGLSGKTLIA TNVIPAGWQA GSTYTSTVNY NT

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.