Factsheet for TraesCS1D01G211500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G208200.1	Wheat	extracellular	96.98	96.98
TraesCS1B01G222300.1	Wheat	extracellular	96.98	96.98
HORVU1Hr1G053300.1	Barley	extracellular	85.28	81.59
Os10t0548600-01	Rice	plasma membrane	73.96	72.86
Zm00001d047135_P011	Maize	extracellular	69.43	68.4
KXG38972	Sorghum	extracellular	67.92	67.67
Zm00001d047147_P001	Maize	extracellular	68.68	67.66
Zm00001d047146_P001	Maize	extracellular	68.68	67.66
EER94537	Sorghum	extracellular	67.55	67.29
TraesCS2D01G459300.1	Wheat	extracellular	67.17	67.17
KXG38969	Sorghum	extracellular	67.17	66.92
Zm00001d047142_P001	Maize	extracellular	67.92	66.91
TraesCS4D01G355700.1	Wheat	extracellular	61.13	60.45
TraesCS4D01G355800.1	Wheat	extracellular	60.75	59.63
TraesCS4D01G355100.1	Wheat	extracellular	60.75	59.63
Zm00001d029827_P001	Maize	extracellular	50.94	58.7
TraesCS6D01G037600.1	Wheat	mitochondrion	23.4	53.45
TraesCS1D01G215300.1	Wheat	extracellular	53.58	51.82
TraesCS3D01G000500.1	Wheat	extracellular	53.58	51.82
TraesCS1D01G215400.1	Wheat	extracellular	51.32	51.52
TraesCS3D01G000400.1	Wheat	cytosol	38.87	50.74
TraesCS6D01G037500.1	Wheat	extracellular	52.08	50.55
TraesCS6D01G037700.1	Wheat	extracellular	52.08	50.55
TraesCS3D01G476800.1	Wheat	extracellular	35.85	48.97
TraesCS6D01G198400.1	Wheat	extracellular	53.96	47.83
TraesCS3D01G476700.1	Wheat	extracellular	53.58	46.25
GSMUA_AchrUn_...	Banana	extracellular	15.85	45.65
TraesCS3D01G474800.1	Wheat	extracellular	53.96	45.54
TraesCS2D01G411000.1	Wheat	extracellular	44.91	45.42
TraesCS2D01G078900.1	Wheat	extracellular	43.4	45.28
TraesCS2D01G411200.1	Wheat	extracellular	44.15	44.83
TraesCS2D01G078600.1	Wheat	extracellular	40.0	44.35
TraesCS2D01G104800.1	Wheat	extracellular	41.89	43.7
TraesCS4D01G361700.1	Wheat	extracellular	52.08	43.67
TraesCS2D01G592900.1	Wheat	extracellular	40.75	43.37
TraesCS4D01G361900.1	Wheat	extracellular	48.3	43.1
TraesCS6D01G231400.1	Wheat	extracellular	43.02	42.86
TraesCS1D01G215100.1	Wheat	plastid	45.66	42.76
TraesCS1D01G215500.1	Wheat	extracellular	50.57	42.54
TraesCS2D01G078800.1	Wheat	extracellular	40.38	42.13
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	49.81	42.04
TraesCS6D01G231300.1	Wheat	extracellular	44.53	40.83
TraesCS6D01G231200.1	Wheat	extracellular	44.15	40.77
TraesCS2D01G411100.1	Wheat	extracellular, plastid	42.64	40.21
TraesCS3D01G482800.1	Wheat	extracellular	43.4	39.93
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	51.32	39.19
TraesCS6D01G218500.1	Wheat	extracellular	36.23	35.82
TraesCS5D01G384200.1	Wheat	extracellular	39.25	33.77
TraesCS2D01G369200.2	Wheat	extracellular	34.72	32.97
TraesCS4D01G323600.1	Wheat	extracellular	26.42	25.27
TraesCS4D01G324000.1	Wheat	extracellular	25.28	24.54
TraesCS4D01G323900.1	Wheat	golgi	24.53	23.99
TraesCS1D01G206700.1	Wheat	extracellular	24.15	22.61
TraesCS4D01G323800.2	Wheat	extracellular	24.15	21.19
TraesCS7D01G532200.1	Wheat	extracellular	21.51	18.45
TraesCS7D01G532400.1	Wheat	extracellular	20.38	17.53
TraesCS7D01G532500.1	Wheat	extracellular	20.75	17.13

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF7	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS1D01G211500	EnsemblPlants:TraesCS1D01G211500.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1D:-:297378271..297379242

Molecular Weight (calculated)

28579.4 Da

IEP (calculated)

9.177

GRAVY (calculated)

-0.183

Length

265 amino acids

Sequence
(BLAST)

001: MGSVSYVLAA AVLAALVSGG ACIPRVPPGP NITTNYNNQW LSAKATWYGK PTGSGPKDNG GACGIKDVNL APYNGMIACG NVPIFKDGKG CGSCYEIKCQ
101: KPSPCSDKPI TIFITDKNYE PIAPYHIDLS GKAFGAMAPP GKEQTLRSFG ELELQFRRVR CKYAPGTKIT FHVEKGSNPN YLAVLVKFVS DDGDVVQMDI
201: QESKSPAWIP LTLSWGAIWR WDGAKPLKAP FSIRVTSESG KKLIAKDVIP ANWKADTVYP SSVQF

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.