Factsheet for TraesCS6D01G198400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G245700.1	Wheat	extracellular	96.99	97.97
TraesCS6A01G217100.1	Wheat	extracellular	96.32	96.97
HORVU6Hr1G055090.1	Barley	extracellular	85.62	95.52
TraesCS3D01G476800.1	Wheat	extracellular	50.84	78.35
TraesCS3D01G476700.1	Wheat	extracellular	79.93	77.85
TraesCS3D01G000400.1	Wheat	cytosol	52.17	76.85
TraesCS3D01G474800.1	Wheat	extracellular	80.6	76.75
Os03t0102700-01	Rice	plastid	70.23	75.27
TraesCS3D01G000500.1	Wheat	extracellular	68.56	74.82
KXG40416	Sorghum	extracellular, vacuole	76.25	71.25
TraesCS4D01G361700.1	Wheat	extracellular	73.91	69.94
TraesCS1D01G215400.1	Wheat	extracellular	61.54	69.7
Zm00001d027283_P001	Maize	extracellular	73.24	68.87
TraesCS6D01G037600.1	Wheat	mitochondrion	26.09	67.24
TraesCS1D01G215300.1	Wheat	extracellular	61.2	66.79
TraesCS6D01G037500.1	Wheat	extracellular	58.19	63.74
TraesCS6D01G037700.1	Wheat	extracellular	58.19	63.74
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	71.57	61.67
TraesCS4D01G361900.1	Wheat	extracellular	58.53	58.92
TraesCS1D01G215100.1	Wheat	plastid	51.51	54.42
TraesCS1D01G211500.1	Wheat	extracellular	47.83	53.96
TraesCS1D01G215500.1	Wheat	extracellular	55.85	53.02
TraesCS2D01G459300.1	Wheat	extracellular	46.49	52.45
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	53.18	50.64
GSMUA_AchrUn_...	Banana	extracellular	15.38	50.0
TraesCS2D01G592900.1	Wheat	extracellular	41.47	49.8
TraesCS2D01G078900.1	Wheat	extracellular	41.47	48.82
TraesCS2D01G411000.1	Wheat	extracellular	41.47	47.33
TraesCS2D01G104800.1	Wheat	extracellular	39.8	46.85
TraesCS4D01G355100.1	Wheat	extracellular	42.14	46.67
TraesCS4D01G355800.1	Wheat	extracellular	42.14	46.67
TraesCS4D01G355700.1	Wheat	extracellular	41.81	46.64
TraesCS6D01G231400.1	Wheat	extracellular	41.47	46.62
TraesCS2D01G078800.1	Wheat	extracellular	39.13	46.06
TraesCS2D01G078600.1	Wheat	extracellular	36.79	46.03
TraesCS2D01G411200.1	Wheat	extracellular	38.8	44.44
TraesCS6D01G231200.1	Wheat	extracellular	42.47	44.25
TraesCS6D01G231300.1	Wheat	extracellular	40.8	42.21
TraesCS3D01G482800.1	Wheat	extracellular	40.47	42.01
TraesCS2D01G411100.1	Wheat	extracellular, plastid	37.12	39.5
TraesCS5D01G384200.1	Wheat	extracellular	40.47	39.29
TraesCS6D01G218500.1	Wheat	extracellular	33.78	37.69
TraesCS2D01G369200.2	Wheat	extracellular	33.44	35.84
TraesCS4D01G323600.1	Wheat	extracellular	24.75	26.71
TraesCS4D01G323900.1	Wheat	golgi	24.08	26.57
TraesCS4D01G324000.1	Wheat	extracellular	23.41	25.64
TraesCS1D01G206700.1	Wheat	extracellular	23.75	25.09
TraesCS4D01G323800.2	Wheat	extracellular	22.74	22.52
TraesCS7D01G532500.1	Wheat	extracellular	21.4	19.94
TraesCS7D01G532200.1	Wheat	extracellular	19.4	18.77
TraesCS7D01G532400.1	Wheat	extracellular	19.06	18.51

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF23	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-TM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G198400	EnsemblPlants:TraesCS6D01G198400.1	SEG:seg	:

Description

No Description!

Coordinates

chr6D:-:276455874..276456887

Molecular Weight (calculated)

31796.2 Da

IEP (calculated)

4.424

GRAVY (calculated)

-0.186

Length

299 amino acids

Sequence
(BLAST)

001: MAPASSYAVA VALFCLLAAD GCCGCFWFLP AIFCPGYSPT PTPAPATPTP SPGTGTGGSG TNVDGGGWLD ARATWYGAPG GAGPDDNGGA CGFKNVNLPP
101: FNAMTSCGNE PLFKDGKGCG SCYQIRCVAH AACSGVPETV ILTDMNYYPV ARYHFDLSGT AFGAMAKDGR NDELRHAGII DMQFKRVPCQ YPGLSVTFHV
201: EQGSNPNYLA VLVEYENGDG DVAQVDLMES RPDNGEPTGV WTPMRESWGS IWRLDTHRPL QGPFSLRVTN ESGRSLVAEQ VIPADWQPDT VYSSLVQFD

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.