Factsheet for TraesCS3D01G476700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G476800.1	Wheat	extracellular	54.4	86.08
TraesCS3D01G474800.1	Wheat	extracellular	87.3	85.35
TraesCS6D01G198400.1	Wheat	extracellular	77.85	79.93
TraesCS3D01G000400.1	Wheat	cytosol	49.19	74.38
Os03t0102700-01	Rice	plastid	65.15	71.68
TraesCS3D01G000500.1	Wheat	extracellular	62.87	70.44
KXG40416	Sorghum	extracellular, vacuole	72.64	69.69
Zm00001d027283_P001	Maize	extracellular	69.38	66.98
TraesCS4D01G361700.1	Wheat	extracellular	68.73	66.77
TraesCS1D01G215400.1	Wheat	extracellular	56.03	65.15
TraesCS1D01G215300.1	Wheat	extracellular	56.68	63.5
TraesCS6D01G037700.1	Wheat	extracellular	55.37	62.27
TraesCS6D01G037600.1	Wheat	mitochondrion	23.45	62.07
TraesCS6D01G037500.1	Wheat	extracellular	55.05	61.9
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	68.4	60.52
TraesCS4D01G361900.1	Wheat	extracellular	54.4	56.23
TraesCS1D01G211500.1	Wheat	extracellular	46.25	53.58
TraesCS2D01G459300.1	Wheat	extracellular	45.28	52.45
TraesCS1D01G215100.1	Wheat	plastid	47.88	51.94
TraesCS2D01G078900.1	Wheat	extracellular	41.69	50.39
TraesCS1D01G215500.1	Wheat	extracellular	51.47	50.16
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	51.14	50.0
TraesCS2D01G592900.1	Wheat	extracellular	40.39	49.8
TraesCS2D01G411000.1	Wheat	extracellular	41.04	48.09
TraesCS4D01G355100.1	Wheat	extracellular	41.69	47.41
TraesCS4D01G355800.1	Wheat	extracellular	41.69	47.41
TraesCS2D01G078600.1	Wheat	extracellular	36.81	47.28
TraesCS6D01G231400.1	Wheat	extracellular	40.72	46.99
TraesCS2D01G078800.1	Wheat	extracellular	38.76	46.85
TraesCS2D01G411200.1	Wheat	extracellular	39.74	46.74
GSMUA_AchrUn_...	Banana	extracellular	14.01	46.74
TraesCS4D01G355700.1	Wheat	extracellular	40.72	46.64
TraesCS2D01G104800.1	Wheat	extracellular	38.11	46.06
TraesCS6D01G231200.1	Wheat	extracellular	40.72	43.55
TraesCS6D01G231300.1	Wheat	extracellular	40.72	43.25
TraesCS3D01G482800.1	Wheat	extracellular	40.39	43.06
TraesCS5D01G384200.1	Wheat	extracellular	40.07	39.94
TraesCS2D01G411100.1	Wheat	extracellular, plastid	36.16	39.5
TraesCS6D01G218500.1	Wheat	extracellular	32.9	37.69
TraesCS2D01G369200.2	Wheat	extracellular	31.6	34.77
TraesCS4D01G323600.1	Wheat	extracellular	24.1	26.71
TraesCS4D01G323900.1	Wheat	golgi	23.45	26.57
TraesCS4D01G324000.1	Wheat	extracellular	22.15	24.91
TraesCS1D01G206700.1	Wheat	extracellular	22.8	24.73
TraesCS4D01G323800.2	Wheat	extracellular	22.15	22.52
TraesCS7D01G532500.1	Wheat	extracellular	21.17	20.25
TraesCS7D01G532400.1	Wheat	extracellular	20.2	20.13
TraesCS7D01G532200.1	Wheat	extracellular	19.87	19.74

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF23	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3D01G476700	EnsemblPlants:TraesCS3D01G476700.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr3D:-:577254837..577255869

Molecular Weight (calculated)

32448.3 Da

IEP (calculated)

5.304

GRAVY (calculated)

-0.170

Length

307 amino acids

Sequence
(BLAST)

001: MAAASSYATA VALLCLLAAD GCCGCPWFLP AAFCPAPTPY TPAPVPATPT PRPVTPTPVP ATPSPGSGST NVDAGGWLDA RATWYGAPDG AGPLDNGGAC
101: GFKNVNLPPF NAMTSCGNEP IFKDGKGCGS CYQIRCVGKA HPACSGVPET VIITDMKYYP VARYHFDLSG TAFGAMAKDG RNEELRHAGI IDMQFKRVPC
201: QYPGLSVTFH VEKGSNPNYL AILVEYGNGD GDVAQVDLMD GDEATGAWAP MRQSWGSIWR MDTRRQLRGP FSLRVTNGSG RSLVADQVIP ADWKPEAVYS
301: SDVQFDG

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.