Factsheet for TraesCS6D01G231400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G249400.2	Wheat	extracellular	94.36	94.72
HORVU0Hr1G016380.2	Barley	extracellular	91.35	91.7
Zm00001d051368_P001	Maize	extracellular	45.49	76.58
EES07509	Sorghum	extracellular	75.56	76.14
Zm00001d017493_P001	Maize	extracellular	75.56	75.28
Zm00001d045861_P001	Maize	mitochondrion	72.18	72.45
EER88254	Sorghum	extracellular	70.3	72.2
KXG19818	Sorghum	extracellular	70.3	72.2
Zm00001d045792_P001	Maize	extracellular	72.18	71.11
TraesCS2D01G411000.1	Wheat	extracellular	69.17	70.23
TraesCS2D01G078900.1	Wheat	extracellular	63.16	66.14
TraesCS2D01G078800.1	Wheat	extracellular	60.9	63.78
TraesCS2D01G592900.1	Wheat	extracellular	59.02	63.05
TraesCS2D01G104800.1	Wheat	extracellular	59.02	61.81
TraesCS2D01G078600.1	Wheat	extracellular	54.89	61.09
TraesCS2D01G411200.1	Wheat	extracellular	57.52	58.62
GSMUA_AchrUn_...	Banana	extracellular	57.52	57.95
VIT_15s0021g02670.t01	Wine grape	extracellular	59.02	57.51
VIT_15s0021g02700.t01	Wine grape	extracellular	58.65	57.14
TraesCS6D01G231200.1	Wheat	extracellular	60.9	56.45
PGSC0003DMT400048506	Potato	plastid	40.98	56.19
Solyc01g090810.2.1	Tomato	extracellular	57.89	56.0
TraesCS2D01G411100.1	Wheat	extracellular, plastid	57.52	54.45
GSMUA_Achr4P26910_001	Banana	extracellular	55.64	54.41
TraesCS5D01G384200.1	Wheat	extracellular	62.03	53.57
KRH33426	Soybean	extracellular	54.51	53.31
CDY18950	Canola	cytosol, extracellular, plastid	47.37	53.16
CDY72345	Canola	cytosol	48.5	52.87
CDY18948	Canola	extracellular	38.72	52.82
TraesCS6D01G231300.1	Wheat	extracellular	57.14	52.6
KRG88934	Soybean	extracellular, vacuole	54.51	52.35
KRH75302	Soybean	extracellular	54.14	51.99
CDX74711	Canola	extracellular	50.38	51.34
TraesCS3D01G482800.1	Wheat	extracellular	55.26	51.04
AT2G45110.1	Thale cress	extracellular	49.62	50.97
KRH33423	Soybean	extracellular	53.01	50.9
KRH65410	Soybean	extracellular	50.75	50.56
CDY18951	Canola	extracellular	51.88	50.18
VIT_09s0002g08510.t01	Wine grape	extracellular	52.63	50.18
CDX74710	Canola	extracellular	51.5	50.0
CDY18946	Canola	extracellular	50.0	50.0
CDY70406	Canola	extracellular	51.5	50.0
CDY72505	Canola	cytosol	30.08	50.0
TraesCS6D01G037600.1	Wheat	mitochondrion	21.8	50.0
Bra004889.1-P	Field mustard	extracellular	51.5	49.82
Bra000370.1-P	Field mustard	extracellular	48.5	49.81
CDX83404	Canola	extracellular	48.5	49.81
CDY72655	Canola	cytosol, plastid	31.58	49.7
AT1G65681.1	Thale cress	cytosol	41.35	49.33
AT1G65680.1	Thale cress	extracellular	50.38	49.08
TraesCS1D01G215400.1	Wheat	extracellular	48.5	48.86
Bra035987.1-P	Field mustard	extracellular	47.74	47.92
CDX96901	Canola	extracellular	47.74	47.92
CDY14888	Canola	extracellular	47.74	47.92
TraesCS1D01G215300.1	Wheat	extracellular	49.25	47.81
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	23.31	47.69
Solyc03g093390.2.1	Tomato	extracellular, nucleus	50.75	47.37
Solyc10g018500.1.1	Tomato	extracellular	46.99	47.17
TraesCS3D01G000400.1	Wheat	cytosol	35.71	46.8
Solyc01g090820.1.1	Tomato	extracellular	45.11	46.69
TraesCS6D01G037700.1	Wheat	extracellular	46.99	45.79
TraesCS3D01G000500.1	Wheat	extracellular	46.62	45.26
TraesCS6D01G037500.1	Wheat	extracellular	46.24	45.05
Solyc05g052330.1.1	Tomato	extracellular	44.74	44.4
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	22.93	44.2
Solyc07g049540.1.1	Tomato	extracellular	42.48	43.97
AT3G60570.1	Thale cress	extracellular	43.23	43.56
TraesCS4D01G361900.1	Wheat	extracellular	48.5	43.43
TraesCS1D01G211500.1	Wheat	extracellular	42.86	43.02
CDX95627	Canola	extracellular	45.11	43.01
PGSC0003DMT400095086	Potato	plastid	40.23	42.8
TraesCS3D01G476800.1	Wheat	extracellular	31.2	42.78
TraesCS6D01G218500.1	Wheat	extracellular	42.86	42.54
TraesCS1D01G215500.1	Wheat	extracellular	49.62	41.9
Bra003421.1-P	Field mustard	extracellular	41.73	41.73
CDX67835	Canola	extracellular	41.73	41.73
CDY71186	Canola	extracellular	42.48	41.7
Bra004890.1-P	Field mustard	extracellular	49.62	41.51
TraesCS6D01G198400.1	Wheat	extracellular	46.62	41.47
TraesCS4D01G355100.1	Wheat	extracellular	41.73	41.11
TraesCS4D01G355800.1	Wheat	extracellular	41.73	41.11
TraesCS3D01G476700.1	Wheat	extracellular	46.99	40.72
TraesCS1D01G215100.1	Wheat	plastid	43.23	40.64
TraesCS2D01G369200.2	Wheat	extracellular	42.11	40.14
TraesCS2D01G459300.1	Wheat	extracellular	39.85	40.0
TraesCS4D01G355700.1	Wheat	extracellular	40.23	39.93
TraesCS4D01G361700.1	Wheat	extracellular	46.99	39.56
TraesCS3D01G474800.1	Wheat	extracellular	45.86	38.85
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	45.49	38.53
CDX74713	Canola	extracellular	49.62	38.48
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	47.74	36.6
CDY48362	Canola	extracellular	45.49	33.89
Bra014484.1-P	Field mustard	extracellular	45.49	33.61
PGSC0003DMT400066943	Potato	cytosol, plastid, vacuole	50.38	29.19
TraesCS4D01G324000.1	Wheat	extracellular	28.57	27.84
TraesCS4D01G323900.1	Wheat	golgi	28.2	27.68
TraesCS4D01G323600.1	Wheat	extracellular	27.82	26.71
TraesCS1D01G206700.1	Wheat	extracellular	26.69	25.09
TraesCS4D01G323800.2	Wheat	extracellular	27.44	24.17
TraesCS7D01G532200.1	Wheat	extracellular	24.81	21.36
TraesCS7D01G532500.1	Wheat	extracellular	25.19	20.87
TraesCS7D01G532400.1	Wheat	extracellular	23.68	20.45

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF52	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS6D01G231400	EnsemblPlants:TraesCS6D01G231400.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6D:-:324824888..324826378

Molecular Weight (calculated)

27751.8 Da

IEP (calculated)

6.719

GRAVY (calculated)

-0.042

Length

266 amino acids

Sequence
(BLAST)

001: MAFSVAKIPA SFAVFMALAF LLRPCASVEI HRKLSGWSNG GATWYGGPNG AGSDGGACGY QDAVDQAPFS SMIAAGSPSI YQDGKGCGSC YQVKCTGHGS
101: CSSSPVTVVL TDLCPAGEAC LGEPVHFDLS GTAFGGMAKP GQADQLRAAG RLQIQYTRVP CNWPGMDIAF KVDAGSNSYY LAMLIEYEDG DGDLSSVELM
201: QSGGNGAGWT KMDRSWGAVW RYNSGGMLQA PFSVRLTSSS GKPLVASNVI PAGWKPGSTY RSVVNY

Best Arabidopsis Sequence Match ( AT3G60570.1 )
(BLAST)

001: MASSSLKCFS FIVVLTTFFA ISLKPCYCHN KTHWNTAGIT WYGDREGPGT TGGACGYGDA VAKHPYRCMV SAGGPSLFKD GKGCGACYRL KCDHPLCTKK
101: PIKVMISDEC PGCTKESVHF DLSGKAFGAL AKRGKGDQLR NLGELKVSYK RACCKHPKTM IAIHVDAGAN PYYMSFAVKF ANGDGNFACI EVQPAGGQYM
201: KMEEMRSAVW RLSPGVPLKG PFNIRLTSAV SGKKIIAKGV IPEKWSPGAI YHSKVNFPVQ RKQK

Arabidopsis Description

EXPB5Expansin-B5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M203]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.