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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
  • plastid 3
  • peroxisome 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, peroxisome, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:golgi
MultiLoc:peroxisome
Plant-mPloc:extracellular
PProwler:mitochondrion
PTS1:peroxisome
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc07g049540.1.1 Tomato extracellular 78.4 76.26
PGSC0003DMT400030395 Potato cytosol, extracellular, mitochondrion, nucleus 27.6 53.08
HORVU2Hr1G013380.1 Barley cytosol, extracellular, mitochondrion 42.0 44.3
TraesCS2B01G122100.1 Wheat extracellular 33.6 43.98
TraesCS2D01G078800.1 Wheat extracellular 44.4 43.7
GSMUA_Achr2P13750_001 Banana extracellular 45.6 43.68
TraesCS2B01G095600.1 Wheat extracellular 44.4 43.53
TraesCSU01G009600.1 Wheat extracellular 43.6 43.08
TraesCS2A01G081200.1 Wheat extracellular 43.6 42.91
TraesCS2D01G078900.1 Wheat extracellular 43.6 42.91
TraesCS2B01G095700.1 Wheat extracellular 43.2 42.86
GSMUA_Achr2P13740_001 Banana extracellular 44.4 42.37
TraesCS2A01G080800.1 Wheat extracellular 42.4 41.73
GSMUA_Achr2P13730_001 Banana extracellular 43.6 41.6
HORVU2Hr1G013360.1 Barley extracellular 41.6 41.43
TraesCS2B01G607400.1 Wheat extracellular 41.2 41.37
CDY18950 Canola cytosol, extracellular, plastid 39.2 41.35
CDY72505 Canola cytosol 26.4 41.25
CDY72345 Canola cytosol 40.0 40.98
TraesCS2D01G592900.1 Wheat extracellular 40.8 40.96
Os04t0552000-00 Rice extracellular 43.2 40.91
EES07509 Sorghum extracellular 43.2 40.91
CDY72655 Canola cytosol, plastid 27.6 40.83
AT1G65681.1 Thale cress cytosol 36.4 40.81
TraesCS2A01G580200.1 Wheat extracellular 40.8 40.64
TraesCS6A01G249700.1 Wheat extracellular 43.2 40.6
TraesCS2A01G580300.1 Wheat extracellular 40.4 40.56
Zm00001d017493_P001 Maize extracellular 43.2 40.45
TraesCS6A01G249400.2 Wheat extracellular 42.8 40.38
HORVU0Hr1G016380.2 Barley extracellular 42.8 40.38
TraesCS6D01G231400.1 Wheat extracellular 42.8 40.23
PGSC0003DMT400048506 Potato plastid 31.2 40.21
KXG19818 Sorghum extracellular 41.6 40.15
EER88254 Sorghum extracellular 41.2 39.77
Zm00001d045861_P001 Maize mitochondrion 42.0 39.62
AT2G45110.1 Thale cress extracellular 40.8 39.38
TraesCS2A01G105200.1 Wheat extracellular 40.0 39.37
TraesCS2D01G104800.1 Wheat extracellular 40.0 39.37
Zm00001d045792_P001 Maize extracellular 42.0 38.89
Os02t0658600-00 Rice plastid 42.4 38.83
CDX74711 Canola extracellular 40.4 38.7
Os05t0246300-01 Rice extracellular 40.8 38.64
TraesCS2D01G078600.1 Wheat extracellular 36.8 38.49
EES11234 Sorghum extracellular 40.4 38.4
Zm00001d026170_P001 Maize extracellular 40.0 38.17
Bra000370.1-P Field mustard extracellular 39.2 37.84
CDX83404 Canola extracellular 39.2 37.84
TraesCS2D01G411000.1 Wheat extracellular 39.6 37.79
TraesCS2A01G413600.1 Wheat extracellular 39.2 37.4
TraesCS2B01G432300.1 Wheat plastid 38.8 37.02
CDY18946 Canola extracellular 39.2 36.84
Zm00001d051368_P001 Maize extracellular 23.2 36.71
CDX96901 Canola extracellular 38.0 35.85
Bra004891.1-P Field mustard cytosol, nucleus, plastid 19.6 35.51
Bra035987.1-P Field mustard extracellular 37.6 35.47
CDY14888 Canola extracellular 37.6 35.47
HORVU2Hr1G097480.1 Barley extracellular 39.2 34.63
CDX95627 Canola extracellular 38.0 34.05
HORVU2Hr1G013340.1 Barley extracellular 39.6 33.9
PGSC0003DMT400047177 Potato extracellular 36.0 33.71
GSMUA_AchrUn_... Banana extracellular 24.0 33.33
Bra003421.1-P Field mustard extracellular 34.8 32.71
CDX67835 Canola extracellular 34.8 32.71
PGSC0003DMT400055827 Potato extracellular 34.0 32.44
AT3G60570.1 Thale cress extracellular 34.0 32.2
CDY71186 Canola extracellular 34.8 32.1
TraesCS5D01G384200.1 Wheat extracellular 37.2 30.19
TraesCS5B01G376500.1 Wheat extracellular 36.8 29.77
KXG37946 Sorghum extracellular 37.6 28.92
EER93754 Sorghum extracellular 34.4 28.1
Os03t0645000-00 Rice mitochondrion 34.4 27.48
PGSC0003DMT400052810 Potato extracellular 26.8 26.48
PGSC0003DMT400067459 Potato extracellular 26.4 26.29
PGSC0003DMT400068379 Potato mitochondrion 23.6 26.22
PGSC0003DMT400067458 Potato extracellular 24.8 24.7
PGSC0003DMT400004660 Potato extracellular 24.0 23.53
CDY48362 Canola extracellular 33.2 23.25
PGSC0003DMT400067456 Potato extracellular 23.2 22.92
Bra014484.1-P Field mustard extracellular 32.8 22.78
HORVU5Hr1G092910.9 Barley plastid 37.6 22.71
PGSC0003DMT400047948 Potato extracellular 23.6 22.69
PGSC0003DMT400066943 Potato cytosol, plastid, vacuole 39.6 21.57
Zm00001d033231_P003 Maize extracellular 34.4 12.04
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBD
InterPro:Expansin_CBD_sfGO:GO:0000003GO:GO:0005575GO:GO:0005576GO:GO:0008150GO:GO:0019953
InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908InterPro:LolPIUniProt:M1DVJ8
PFAM:PF01357PFAM:PF03330EnsemblPlantsGene:PGSC0003DMG400044657PGSC:PGSC0003DMG400044657EnsemblPlants:PGSC0003DMT400095086PRINTS:PR00829
PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF3InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF49590SUPFAM:SSF50685UniParc:UPI0002969C25:
Description
Expansin-B15 [Source:PGSC_GENE;Acc:PGSC0003DMG400044657]
Coordinates
chr7:-:45374172..45376410
Molecular Weight (calculated)
26869.6 Da
IEP (calculated)
7.309
GRAVY (calculated)
-0.386
Length
250 amino acids
Sequence
(BLAST)
001: MDPPNPSGLA HTGFASQVKL TSYFGRPAKI KPNPSQGGAC GLEDDVARSP YNSMITAGNQ ALFKQGVGCG ACYQVFCNQT QNSHCSGNPI TVTLTDECPG
101: TCNNDPVHFD LSGIAFAKLA KSGEEGELHK AGRIPIFYNR VPCNYNRNIL FKVDKGSNPN FFAVVSEAVD GDGDLSLVEI QTGGENTWKS MNRMIGSTWS
201: VGIEPNTQKP PFSLKLTSGT KQTVTALNVI PDGWQPTKVY DSNVNFPTKL
Best Arabidopsis Sequence Match ( AT1G65681.1 )
(BLAST)
001: MIGELDFPFL GAGSTGGACG FAVANPPLYG MVSAGGPSVF NNGIGCGTCF QILCNGHPAC SRRPITVTIT DECPGGPCAS EPAHFDLSGK AMGALARPGQ
101: GDRLRSAGVL RVYYRRVECL YRRTNIAFRM DPGANPYYIS FVVEYENGDG DLAYIEIQPA DGEFIPMQEM RSAVWKISSG SPLTGPFNIR LTSAESHKVV
201: LAYNVIPANW KPNETYRSVV NFK
Arabidopsis Description
EXPB6Expansin-B6 [Source:UniProtKB/Swiss-Prot;Acc:F4IBJ3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.