Factsheet for PGSC0003DMT400004660

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g077330.2.1	Tomato	extracellular	98.04	98.04
PGSC0003DMT400052810	Potato	extracellular	78.43	79.05
VIT_02s0012g00830.t01	Wine grape	extracellular	74.12	74.12
KRH28238	Soybean	extracellular	73.33	73.33
KRH77254	Soybean	extracellular	72.94	72.94
KRH76358	Soybean	extracellular, plasma membrane, vacuole	60.0	70.18
KRH04284	Soybean	extracellular	69.02	70.12
KRH57566	Soybean	extracellular	68.24	69.6
GSMUA_AchrUn_...	Banana	extracellular	66.67	66.93
Os07t0496250-01	Rice	extracellular	61.96	61.72
GSMUA_Achr11P...	Banana	extracellular	58.82	59.06
OQU89980	Sorghum	extracellular, plasma membrane, vacuole	40.39	45.78
GSMUA_Achr5P12710_001	Banana	extracellular, nucleus, plasma membrane	55.29	44.2
PGSC0003DMT400067456	Potato	extracellular	40.78	41.11
PGSC0003DMT400067458	Potato	extracellular	40.0	40.64
PGSC0003DMT400068379	Potato	mitochondrion	35.69	40.44
PGSC0003DMT400067459	Potato	extracellular	39.22	39.84
PGSC0003DMT400047948	Potato	extracellular	36.86	36.15
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	17.25	33.85
PGSC0003DMT400048506	Potato	plastid	23.53	30.93
PGSC0003DMT400055827	Potato	extracellular	27.45	26.72
PGSC0003DMT400047177	Potato	extracellular	27.84	26.59
PGSC0003DMT400095086	Potato	plastid	23.53	24.0
PGSC0003DMT400066943	Potato	cytosol, plastid, vacuole	25.1	13.94

Protein Annotations

EntrezGene:102578252	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.4	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	InterPro:IPR007112	InterPro:IPR007117
InterPro:IPR036749	InterPro:IPR036908	UniProt:M0ZNS5	PFAM:PF01357	PFAM:PF03330	EnsemblPlantsGene:PGSC0003DMG400001848
PGSC:PGSC0003DMG400001848	EnsemblPlants:PGSC0003DMT400004660	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF2	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM
UniParc:UPI0002951702	RefSeq:XP_006358602.1	:	:	:	:

Description

Major pollen allergen Ory s 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400001848]

Coordinates

chr8:-:50182876..50184750

Molecular Weight (calculated)

27906.7 Da

IEP (calculated)

4.449

GRAVY (calculated)

-0.248

Length

255 amino acids

Sequence
(BLAST)

001: MAPLQVLSVF VASFIFMQTL GNSQTCPDCF TRSRAAHYPN SEEKGTETGS CGFGTFGATI NGGDVSAASE LYRNGLGCGA CYQVRCTDGN YCSDKGVTIV
101: VTDQGAGDRT DFILSQRAFA RMAQTTDAAA SILPLGVVDI EYRRVSCTYP DKNITIKIEE SSDNPHYLAF VIWYQQGKKD ITAVQLCETQ NFVCKLLDRT
201: RGAVWTTTSP PRGPLQIRML LSVDDEDETW VVPVNNIPEN WKAGDTYDSG IQEDA

Best Arabidopsis Sequence Match ( AT4G38400.1 )
(BLAST)

001: MLQGFLFLLS VVLLFSSSAA ACDRCLHSSK AAYFSSASAL SSGACAYGSM ATGFFAGHIA AALPSIYKDG SGCGACFQVR CKNPTLCSSK GTTVIVTDLN
101: KTNQTDLVLS SRAFRAMAKP VVGADRDLLK QGIVDIEYRR VPCDYGNKKM NVRVEESSKN PNYLAIKLLY QGGQTEVVAI YIAQVGSSHW SYMTRSHGAV
201: WVTDKVPNGA LQFRFVVTAG YDGKMVWSQR VLPANWEAGK SYDAGVQITD IAQEGCDPCD DHIWN

Arabidopsis Description

EXLA2Expansin-like A2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVE5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.