Factsheet for Solyc08g077330.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004660	Potato	extracellular	98.04	98.04
VIT_02s0012g00830.t01	Wine grape	extracellular	74.12	74.12
KRH28238	Soybean	extracellular	73.33	73.33
KRH77254	Soybean	extracellular	72.94	72.94
KRH04284	Soybean	extracellular	69.41	70.52
KRH76358	Soybean	extracellular, plasma membrane, vacuole	60.0	70.18
KRH57566	Soybean	extracellular	68.63	70.0
GSMUA_AchrUn_...	Banana	extracellular	65.49	65.75
Os07t0496250-01	Rice	extracellular	60.78	60.55
GSMUA_Achr11P...	Banana	extracellular	58.43	58.66
OQU89980	Sorghum	extracellular, plasma membrane, vacuole	40.0	45.33
GSMUA_Achr5P12710_001	Banana	extracellular, nucleus, plasma membrane	54.12	43.26
Solyc08g077900.2.1	Tomato	extracellular	41.57	41.9
Solyc06g060970.1.1	Tomato	extracellular	39.61	40.73
Solyc08g077910.2.1	Tomato	extracellular	39.61	40.24
Solyc01g112000.2.1	Tomato	extracellular	37.65	36.78
Solyc05g052330.1.1	Tomato	extracellular	31.76	30.22
Solyc10g018500.1.1	Tomato	extracellular	30.59	29.43
Solyc03g093390.2.1	Tomato	extracellular, nucleus	30.98	27.72
Solyc07g054170.2.1	Tomato	extracellular	29.02	27.72
Solyc01g090820.1.1	Tomato	extracellular	27.84	27.63
Solyc01g090810.2.1	Tomato	extracellular	29.41	27.27
Solyc10g008440.2.1	Tomato	extracellular	26.27	25.57
Solyc07g049540.1.1	Tomato	extracellular	25.49	25.29

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.4	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	UniProt:K4CN93	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF2	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc08g077330.2	EnsemblPlants:Solyc08g077330.2.1	UniParc:UPI000276C2AD	:

Description

No Description!

Coordinates

chr8:-:61223533..61225046

Molecular Weight (calculated)

27866.6 Da

IEP (calculated)

4.443

GRAVY (calculated)

-0.258

Length

255 amino acids

Sequence
(BLAST)

001: MAPLQVVSVF VASFIFMQTL GNSQTCPDCF TRSRAAHYPN SEEKGTETGS CGFGTFGATI NGGDVSAASE LYRNGLGCGA CYQVRCTDSN YCSDKGVTVV
101: VTDQGAGDRT DFILSQRAFA RMAQTTDAAA SILPLGVVDI EYRRVSCTYP DKNITIKIEE SSDNPHYLAF VIWYQQGKKD ITAVQLCETQ NFVCKLLDRT
201: RGAVWTTTSP PRGPLQIRML LSVDDEDETW VDPVNNIPEN WKAGDTYDSG IQADA

Best Arabidopsis Sequence Match ( AT4G17030.1 )
(BLAST)

001: MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY GEFGRDINNG EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT

Arabidopsis Description

EXLB1Expansin-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WRS3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.