CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28238	Soybean	extracellular	95.29	95.29
KRH76358	Soybean	extracellular, plasma membrane, vacuole	79.22	92.66
KRH57566	Soybean	extracellular	80.78	82.4
KRH04284	Soybean	extracellular	80.78	82.07
VIT_02s0012g00830.t01	Wine grape	extracellular	76.08	76.08
Solyc08g077330.2.1	Tomato	extracellular	72.94	72.94
PGSC0003DMT400004660	Potato	extracellular	72.94	72.94
PGSC0003DMT400052810	Potato	extracellular	71.76	72.33
GSMUA_AchrUn_...	Banana	extracellular	67.06	67.32
Os07t0496250-01	Rice	extracellular	64.71	64.45
GSMUA_Achr11P...	Banana	extracellular	58.82	59.06
OQU89980	Sorghum	extracellular, plasma membrane, vacuole	42.35	48.0
GSMUA_Achr5P12710_001	Banana	extracellular, nucleus, plasma membrane	57.65	46.08
KRH57515	Soybean	extracellular	45.1	45.82
KRH04222	Soybean	extracellular	44.71	45.42
KRH77296	Soybean	extracellular	41.96	42.63
KRH28194	Soybean	extracellular	41.57	42.23
KRH04215	Soybean	nucleus	41.18	42.0
KRH04218	Soybean	extracellular	41.18	42.0
KRH04220	Soybean	endoplasmic reticulum	40.39	41.53
KRH57508	Soybean	endoplasmic reticulum	39.22	40.98
KRH57512	Soybean	extracellular	39.61	40.89
KRH04221	Soybean	extracellular	39.22	40.49
KRH29091	Soybean	extracellular	37.25	36.68
KRH24119	Soybean	extracellular	36.08	35.25
KRH33426	Soybean	extracellular	34.9	32.72
KRH65410	Soybean	extracellular	32.55	31.09
KRH33423	Soybean	extracellular	32.94	30.32
KRH75302	Soybean	extracellular	32.55	29.96
KRG88934	Soybean	extracellular, vacuole	32.55	29.96
KRH22402	Soybean	extracellular	28.24	27.91
KRH26935	Soybean	extracellular	28.24	27.59
KRH55988	Soybean	extracellular	27.45	26.22
KRH25552	Soybean	extracellular	26.67	25.47

Protein Annotations

EntrezGene:100794009	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.4	EMBL:ACUP02000668	InterPro:Expan_Lol_pI
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	EnsemblPlantsGene:GLYMA_01G202100	GO:GO:0005575	GO:GO:0005576
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	UniProt:K7K4V5	EnsemblPlants:KRH77254
ProteinID:KRH77254	ProteinID:KRH77254.1	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF2	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00023372ED	:	:

Description

hypothetical protein

Coordinates

chr1:+:53502424..53504312

Molecular Weight (calculated)

27805.4 Da

IEP (calculated)

4.255

GRAVY (calculated)

-0.061

Length

255 amino acids

Sequence
(BLAST)

001: MALYLFCLLL AITFIFMQTL ADTSCTDCFI HSRAAYYPNS EEHGTDIGAC GFGSFGATVN GGDVSAASSL YRNGVGCGAC YQVRCTNSVY CSENGVTAVI
101: TDQGSSDNTD FILSKHAFSR MAQTTDAAAS LLALGVVDIE YRRVACSYPD KNITIKIDES SNNPYYLAFV IWYQQGRRDI TAVQLCETQN FVCQLLDRSH
201: GAVWTTTSPP SGPLSLRMLF SDEEEGEETW VVPVNNIPGD WKAGETYDSG VQVNQ

Best Arabidopsis Sequence Match ( AT3G45960.2 )
(BLAST)

001: MRSFLYLIVV IFLFSSSVNA CDRCLHRSKA SYFSSASALS SGACAYGPMA TSFFAGHIAA AIPSIYKDGA GCGACFQVRC KNPKLCNSKG TIVMVTDLNT
101: SNQTDLVLSS RAFRAMAKPV VGVDKYLLKQ GIVDVEYQRV PCNYGKRNLN VRVEEASKKP NYLAIKLLYQ GGQTEVVGID IAPVGSSQWS YMSRSHGAVW
201: ATDKVPTGAL QFKFTVTGGY DGKTVWSKRV LPANWNSGRI YDAGVQITDI AQEGCDTCGH IWN

Arabidopsis Description

EXLA3Expansin-like A3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.