CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26935	Soybean	extracellular	83.72	82.76
KRH55988	Soybean	extracellular	72.09	69.66
KRH25552	Soybean	extracellular	71.32	68.91
Bra026272.1-P	Field mustard	extracellular	67.05	65.28
CDY18990	Canola	extracellular	67.05	65.28
AT4G28250.1	Thale cress	extracellular	65.89	64.39
VIT_12s0059g00190.t01	Wine grape	extracellular	63.95	63.71
GSMUA_AchrUn_...	Banana	extracellular	64.73	63.5
CDY58728	Canola	extracellular	65.12	63.4
Bra024215.1-P	Field mustard	extracellular	64.73	63.02
CDY70556	Canola	extracellular	64.73	63.02
Solyc07g054170.2.1	Tomato	extracellular	64.73	62.55
PGSC0003DMT400047177	Potato	extracellular	63.57	61.42
GSMUA_Achr1P00120_001	Banana	extracellular	63.18	61.28
GSMUA_Achr5P12080_001	Banana	extracellular	63.18	61.05
Os02t0639500-01	Rice	extracellular	61.24	60.54
CDY05789	Canola	extracellular	61.63	60.0
TraesCS6A01G235800.1	Wheat	extracellular	62.02	59.93
TraesCS6D01G218500.1	Wheat	extracellular	62.02	59.7
AT2G20750.1	Thale cress	extracellular	62.4	59.41
Bra036499.1-P	Field mustard	extracellular	60.85	59.25
CDY31940	Canola	extracellular	60.85	59.25
Solyc10g008440.2.1	Tomato	extracellular	60.08	59.16
PGSC0003DMT400055827	Potato	extracellular	60.08	59.16
Zm00001d017377_P001	Maize	extracellular	61.24	58.96
TraesCS6B01G264400.1	Wheat	extracellular	61.24	58.96
EES05488	Sorghum	extracellular	62.02	58.61
HORVU6Hr1G060410.7	Barley	extracellular	60.47	58.21
TraesCS2D01G369200.2	Wheat	extracellular	61.24	56.63
TraesCS2B01G390000.1	Wheat	extracellular	61.63	56.58
TraesCS2A01G373000.1	Wheat	extracellular	61.24	56.23
Zm00001d002860_P002	Maize	extracellular	61.63	52.13
KRH33426	Soybean	extracellular	44.57	42.28
KRG88934	Soybean	extracellular, vacuole	43.41	40.43
KRH65410	Soybean	extracellular	41.09	39.7
KRH75302	Soybean	extracellular	42.25	39.35
KRH33423	Soybean	extracellular	41.86	38.99
KRH57566	Soybean	extracellular	29.84	30.8
KRH04284	Soybean	extracellular	29.46	30.28
Os04t0530100-01	Rice	extracellular, mitochondrion, vacuole	37.6	30.03
KRH57508	Soybean	endoplasmic reticulum	28.29	29.92
KRH04220	Soybean	endoplasmic reticulum	28.29	29.44
KRH29091	Soybean	extracellular	29.07	28.96
KRH04221	Soybean	extracellular	27.52	28.74
KRH24119	Soybean	extracellular	28.68	28.35
KRH57512	Soybean	extracellular	27.13	28.34
KRH77254	Soybean	extracellular	27.91	28.24
KRH77296	Soybean	extracellular	27.13	27.89
KRH57515	Soybean	extracellular	27.13	27.89
KRH28238	Soybean	extracellular	27.52	27.84
KRH76358	Soybean	extracellular, plasma membrane, vacuole	23.26	27.52
KRH28194	Soybean	extracellular	26.74	27.49
KRH04218	Soybean	extracellular	26.36	27.2
KRH04215	Soybean	nucleus	26.36	27.2
KRH04222	Soybean	extracellular	26.36	27.09

Protein Annotations

EntrezGene:100808279	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.3	EMBL:ACUP02008411	InterPro:Expan_Lol_pI
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	EnsemblPlantsGene:GLYMA_13G298100	GO:GO:0000003	GO:GO:0005575
GO:GO:0005576	GO:GO:0006949	GO:GO:0008150	GO:GO:0009506	GO:GO:0009653	GO:GO:0009987
GO:GO:0019953	UniProt:H9TN51	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
EMBL:JQ303255	EnsemblPlants:KRH22402	ProteinID:KRH22402	ProteinID:KRH22402.1	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF5	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	UniParc:UPI000233BEF2	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:39671154..39674089

Molecular Weight (calculated)

28207.8 Da

IEP (calculated)

9.012

GRAVY (calculated)

-0.197

Length

258 amino acids

Sequence
(BLAST)

001: MQCQRFSAVL FLSLCFRIAQ VYAHGDSDLD EHWYTGTATW YGDPEGNGSN GGACGYGTLV DVKPLKGRVA AVGPVLFKKG EGCGACYKVK CLDRSICSKR
101: AVTVIITDEC PGCRTDRTHF DLSGSAFGRM ALSGENVKLR NRGEIPILYR RASCKYGGKN IVFHVNEGST PFWLSLQVEF QNGDGVIGSM HIQQAGSSEW
201: LQMKREWGAN WCIIKGPLKG PFSVKLSTST GKSLIAKDVI PSNWAPKASY TSRLNFLS

Best Arabidopsis Sequence Match ( AT4G28250.1 )
(BLAST)

001: MQLFPVMLAT LCIVLQLLIG SSALATTNRH VSNSHWLPAV ATWYGSPNGD GSDGGACGYG TLVDVKPLHA RVGAVNPILF KNGEGCGACY KVRCLDKSIC
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL

Arabidopsis Description

EXPB3EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.